RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 USP17L4A6NCW7 530 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 H7C1W4 665 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 CASP7P55210 303 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 DGKZQ13574 1117 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 USP17L1Q7RTZ2 530 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 PODNQ7Z5L7 613 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 RASAL3Q86YV0 1011 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 WWC1Q8IX03 1113 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 CCDC102AQ96A19 550 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 CSRNP1Q96S65 589 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
PRAME-206ENST00000406503 PITPNM2Q9BZ72 1349 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 G3V3G9 751 aa16.57■□□□□ 0.24
PRAME-206ENST00000406503 USP17L8P0C7I0 530 aa16.57■□□□□ 0.24
PRAME-206ENST00000406503 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
PRAME-206ENST00000406503 TWISTNBQ3B726 338 aaPredicted RBP16.57■□□□□ 0.24
PRAME-206ENST00000406503 DACT2Q5SW24 774 aa16.57■□□□□ 0.24
PRAME-206ENST00000406503 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
PRAME-206ENST00000406503 MOB2Q70IA6 237 aa16.57■□□□□ 0.24
PRAME-206ENST00000406503 RNF186Q9NXI6 227 aa16.57■□□□□ 0.24
PRAME-206ENST00000406503 SAGE1Q9NXZ1 904 aa16.57■□□□□ 0.24
PRAME-206ENST00000406503 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
PRAME-206ENST00000406503 KLRK1P26718 216 aa16.56■□□□□ 0.24
PRAME-206ENST00000406503 NBPF9Q3BBW0 867 aa16.56■□□□□ 0.24
PRAME-206ENST00000406503 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
PRAME-206ENST00000406503 PLA2G12BQ9BX93 195 aa16.56■□□□□ 0.24
PRAME-206ENST00000406503 MKI67P46013 3256 aaKnown RBP16.56■□□□□ 0.24
PRAME-206ENST00000406503 OTOFQ9HC10 1997 aa16.55■□□□□ 0.24
PRAME-206ENST00000406503 IRS2Q9Y4H2 1338 aa16.55■□□□□ 0.24
PRAME-206ENST00000406503 TRPA1O75762 1119 aa16.54■□□□□ 0.24
PRAME-206ENST00000406503 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
PRAME-206ENST00000406503 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
PRAME-206ENST00000406503 GCKRQ14397 625 aa16.54■□□□□ 0.24
PRAME-206ENST00000406503 PRAMEF18Q5VWM3 479 aa16.54■□□□□ 0.24
PRAME-206ENST00000406503 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
PRAME-206ENST00000406503 CHMP4AQ9BY43 222 aa16.54■□□□□ 0.24
PRAME-206ENST00000406503 IL16Q14005 1332 aa16.53■□□□□ 0.24
PRAME-206ENST00000406503 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
PRAME-206ENST00000406503 WNT10BO00744 389 aa16.53■□□□□ 0.24
PRAME-206ENST00000406503 CSF1RP07333 972 aa16.53■□□□□ 0.24
PRAME-206ENST00000406503 MLLT1Q03111 559 aaPredicted RBP16.53■□□□□ 0.24
PRAME-206ENST00000406503 FLIIQ13045 1269 aa16.53■□□□□ 0.24
PRAME-206ENST00000406503 ITGA6P23229 1130 aa16.52■□□□□ 0.24
PRAME-206ENST00000406503 FKBP1BP68106 108 aa16.52■□□□□ 0.24
PRAME-206ENST00000406503 STRIP1Q5VSL9 837 aa16.52■□□□□ 0.24
PRAME-206ENST00000406503 ZBED3Q96IU2 234 aaPredicted RBP16.52■□□□□ 0.24
PRAME-206ENST00000406503 COA1Q9GZY4 146 aa16.52■□□□□ 0.24
PRAME-206ENST00000406503 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
PRAME-206ENST00000406503 ZNF804BA4D1E1 1349 aa16.51■□□□□ 0.23
PRAME-206ENST00000406503 UBE2Q2LH0YL09 131 aa16.51■□□□□ 0.23
PRAME-206ENST00000406503 SNAP23O00161 211 aa16.51■□□□□ 0.23
PRAME-206ENST00000406503 SASH1O94885 1247 aa16.51■□□□□ 0.23
PRAME-206ENST00000406503 SSC5DA1L4H1 1573 aa16.51■□□□□ 0.23
PRAME-206ENST00000406503 MYO3BQ8WXR4 1341 aa16.5■□□□□ 0.23
PRAME-206ENST00000406503 VAMP4O75379 141 aa16.5■□□□□ 0.23
PRAME-206ENST00000406503 IGHMBP2P38935 993 aaKnown RBP16.5■□□□□ 0.23
PRAME-206ENST00000406503 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
PRAME-206ENST00000406503 DNAAF4Q8WXU2 420 aa16.5■□□□□ 0.23
PRAME-206ENST00000406503 CHRNDQ07001 517 aa16.49■□□□□ 0.23
PRAME-206ENST00000406503 LINS1Q8NG48 757 aa16.49■□□□□ 0.23
PRAME-206ENST00000406503 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
PRAME-206ENST00000406503 FOXO4P98177 505 aa16.48■□□□□ 0.23
PRAME-206ENST00000406503 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
PRAME-206ENST00000406503 TTLL5Q6EMB2 1281 aa16.48■□□□□ 0.23
PRAME-206ENST00000406503 KIAA0825Q8IV33 1275 aa16.48■□□□□ 0.23
PRAME-206ENST00000406503 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
PRAME-206ENST00000406503 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
PRAME-206ENST00000406503 SLC34A2O95436 690 aa16.47■□□□□ 0.23
PRAME-206ENST00000406503 GTF2IP78347 998 aa16.47■□□□□ 0.23
PRAME-206ENST00000406503 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
PRAME-206ENST00000406503 ANKRD2Q9GZV1 360 aa16.47■□□□□ 0.23
PRAME-206ENST00000406503 CD209Q9NNX6 404 aa16.47■□□□□ 0.23
PRAME-206ENST00000406503 PCDHAC2Q9Y5I4 1007 aa16.47■□□□□ 0.23
PRAME-206ENST00000406503 COL1A1P02452 1464 aaPredicted RBP16.47■□□□□ 0.23
PRAME-206ENST00000406503 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
PRAME-206ENST00000406503 AOX1Q06278 1338 aa16.46■□□□□ 0.23
PRAME-206ENST00000406503 F6X3S4 739 aa16.46■□□□□ 0.23
PRAME-206ENST00000406503 TAF5LO75529 589 aa16.46■□□□□ 0.23
PRAME-206ENST00000406503 EXOSC9Q06265 439 aaKnown RBP16.46■□□□□ 0.23
PRAME-206ENST00000406503 EPHA10Q5JZY3 1008 aa16.46■□□□□ 0.23
PRAME-206ENST00000406503 OGFOD1Q8N543 542 aa16.46■□□□□ 0.23
PRAME-206ENST00000406503 MPHOSPH8Q99549 860 aa16.46■□□□□ 0.23
PRAME-206ENST00000406503 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.23
PRAME-206ENST00000406503 FZD1Q9UP38 647 aa16.46■□□□□ 0.23
PRAME-206ENST00000406503 TM4SF4P48230 202 aa16.45■□□□□ 0.22
PRAME-206ENST00000406503 SOX10P56693 466 aa16.45■□□□□ 0.22
PRAME-206ENST00000406503 PTPN12Q05209 780 aaKnown RBP16.45■□□□□ 0.22
PRAME-206ENST00000406503 BEND3Q5T5X7 828 aa16.45■□□□□ 0.22
PRAME-206ENST00000406503 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
PRAME-206ENST00000406503 CTU1Q7Z7A3 348 aaKnown RBP16.45■□□□□ 0.22
PRAME-206ENST00000406503 HELBQ8NG08 1087 aaPredicted RBP16.45■□□□□ 0.22
PRAME-206ENST00000406503 RBBP6Q7Z6E9 1792 aaKnown RBP16.44■□□□□ 0.22
PRAME-206ENST00000406503 ANKRD18BA2A2Z9 1011 aa16.44■□□□□ 0.22
PRAME-206ENST00000406503 TBC1D8O95759 1140 aa16.44■□□□□ 0.22
PRAME-206ENST00000406503 MMP14P50281 582 aa16.44■□□□□ 0.22
PRAME-206ENST00000406503 MKRN3Q13064 507 aaKnown RBP16.44■□□□□ 0.22
PRAME-206ENST00000406503 ZNF296Q8WUU4 475 aaPredicted RBP16.44■□□□□ 0.22
PRAME-206ENST00000406503 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
PRAME-206ENST00000406503 IL1R1P14778 569 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms