RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 CEP85Q6P2H3 762 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 CNNM3Q8NE01 707 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 PPIP5K2O43314 1243 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 CEP152O94986 1710 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 TNNT3P45378 269 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-204ENST00000406451 NMIQ13287 307 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-204ENST00000406451 RAB3GAP1Q15042 981 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 EPB41L2O43491 1005 aaKnown RBP5.73□□□□□ -1.49
HDAC9-204ENST00000406451 TRIM37O94972 964 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 RBM25P49756 843 aaKnown RBP5.73□□□□□ -1.49
HDAC9-204ENST00000406451 KRT27Q7Z3Y8 459 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 FSIP1Q8NA03 581 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 ERCC4Q92889 916 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-204ENST00000406451 ARHGEF10LQ9HCE6 1279 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 MYOM2P54296 1465 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 FAM135BQ49AJ0 1406 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 BRF1Q92994 677 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 ANO10Q9NW15 660 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 BCS1LQ9Y276 419 aa5.73□□□□□ -1.49
HDAC9-204ENST00000406451 ATP7BP35670 1465 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 CTAGE5O15320 804 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 CALML3P27482 149 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 CCDC24Q8N4L8 307 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 MROH5Q6ZUA9 1318 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 A0A1B0GUL7 405 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 CA8P35219 290 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 EAPPQ56P03 285 aaPredicted RBP5.72□□□□□ -1.49
HDAC9-204ENST00000406451 CACNA2D4Q7Z3S7 1137 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 MPNDQ8N594 471 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 LRRC2Q9BYS8 371 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 SAP30BPQ9UHR5 308 aaKnown RBP5.72□□□□□ -1.49
HDAC9-204ENST00000406451 ECM2O94769 699 aaPredicted RBP5.72□□□□□ -1.49
HDAC9-204ENST00000406451 PHKG2P15735 406 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 DPY19L2Q6NUT2 758 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 ARAP3Q8WWN8 1544 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 STX6O43752 255 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 MBD4O95243 580 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 RTL1A6NKG5 1358 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 H7C1D1 291 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 CHL1O00533 1208 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 JAKMIP3Q5VZ66 844 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 ALG1Q9BT22 464 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 CCDC171Q6TFL3 1326 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 PPFIA3O75145 1194 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 PARP1P09874 1014 aaKnown RBP5.72□□□□□ -1.49
HDAC9-204ENST00000406451 NCBP1Q09161 790 aaKnown RBP5.72□□□□□ -1.49
HDAC9-204ENST00000406451 SPA17Q15506 151 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 CCDC40Q4G0X9 1142 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 IQCEQ6IPM2 695 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 TBC1D22AQ8WUA7 517 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 TAF4BQ92750 862 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 ESYT1Q9BSJ8 1104 aa5.72□□□□□ -1.49
HDAC9-204ENST00000406451 PRC1O43663 620 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 TCIRG1Q13488 830 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 KANK3Q6NY19 840 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 FAM114A1Q8IWE2 563 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 ROBO2Q9HCK4 1378 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 CCDC183Q5T5S1 534 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 Q6ZUG5 572 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 C2CD5Q86YS7 1000 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 NLGN1Q8N2Q7 840 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 EXOC1Q9NV70 894 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 IVNS1ABPQ9Y6Y0 642 aa5.71□□□□□ -1.49
HDAC9-204ENST00000406451 SYNMO15061 1565 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 LOC102724428A0A0B4J2F2 783 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 SIK1P57059 783 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 CCDC174Q6PII3 467 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 G2E3Q7L622 706 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 A2ML1A8K2U0 1454 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 TCERG1LQ5VWI1 586 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 LPIN2Q92539 896 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 IQGAP3Q86VI3 1631 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 CLTCQ00610 1675 aaKnown RBP5.71□□□□□ -1.5
HDAC9-204ENST00000406451 GNA11P29992 359 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 SETQ01105 290 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-204ENST00000406451 ARHGAP27Q6ZUM4 889 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 FERMT2Q96AC1 680 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 CLASP1Q7Z460 1538 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 IGHDP01880 384 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 GCKRQ14397 625 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 ZNF594Q96JF6 807 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-204ENST00000406451 ZSCAN16Q9H4T2 348 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-204ENST00000406451 SBNO2Q9Y2G9 1366 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 MTIF2P46199 727 aaKnown RBP5.71□□□□□ -1.5
HDAC9-204ENST00000406451 CTSWP56202 376 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 TNFAIP1Q13829 316 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 DLGAP5Q15398 846 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 ARHGAP29Q52LW3 1261 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 USP37Q86T82 979 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 CNKSR1Q969H4 720 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 XAGE2Q96GT9 111 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 PCDHB15Q9Y5E8 787 aa5.71□□□□□ -1.5
HDAC9-204ENST00000406451 TAF5LO75529 589 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 ANAPC15P60006 121 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 RPS8P62241 208 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 UNC5CLQ8IV45 518 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 RIMBP3CA6NJZ7 1639 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 RIMBP3BA6NNM3 1639 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 RIMBP3Q9UFD9 1639 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms