RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 MKRN3Q13064 507 aaKnown RBP27.05■■□□□ 1.92
RHBDD3-202ENST00000406335 NBPF9Q3BBW0 867 aa27.05■■□□□ 1.92
RHBDD3-202ENST00000406335 PKN2Q16513 984 aaKnown RBP27.04■■□□□ 1.92
RHBDD3-202ENST00000406335 C8orf58Q8NAV2 365 aa27.04■■□□□ 1.92
RHBDD3-202ENST00000406335 MXD3Q9BW11 206 aa27.04■■□□□ 1.92
RHBDD3-202ENST00000406335 HPS5Q9UPZ3 1129 aa27.04■■□□□ 1.92
RHBDD3-202ENST00000406335 BSDC1Q9NW68 430 aaPredicted RBP27.03■■□□□ 1.92
RHBDD3-202ENST00000406335 PCDH10Q9P2E7 1040 aa27.03■■□□□ 1.92
RHBDD3-202ENST00000406335 MINPP1Q9UNW1 487 aa27.03■■□□□ 1.92
RHBDD3-202ENST00000406335 PRKG1Q13976 671 aa27.02■■□□□ 1.92
RHBDD3-202ENST00000406335 ZNF296Q8WUU4 475 aaPredicted RBP27.02■■□□□ 1.92
RHBDD3-202ENST00000406335 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.02■■□□□ 1.92
RHBDD3-202ENST00000406335 MYO3BQ8WXR4 1341 aa27.01■■□□□ 1.91
RHBDD3-202ENST00000406335 WTIPA6NIX2 430 aaPredicted RBP27.01■■□□□ 1.91
RHBDD3-202ENST00000406335 IGHMBP2P38935 993 aaKnown RBP27.01■■□□□ 1.91
RHBDD3-202ENST00000406335 CCT4P50991 539 aaKnown RBP27.01■■□□□ 1.91
RHBDD3-202ENST00000406335 KSR2Q6VAB6 950 aa27.01■■□□□ 1.91
RHBDD3-202ENST00000406335 TTLL11Q8NHH1 800 aa27.01■■□□□ 1.91
RHBDD3-202ENST00000406335 GREM2Q9H772 168 aa27.01■■□□□ 1.91
RHBDD3-202ENST00000406335 POLR2AP24928 1970 aaKnown RBP27■■□□□ 1.91
RHBDD3-202ENST00000406335 PI4KAP2A4QPH2 592 aa27■■□□□ 1.91
RHBDD3-202ENST00000406335 ARMC9Q7Z3E5 817 aa27■■□□□ 1.91
RHBDD3-202ENST00000406335 PI4KAP1Q8N8J0 262 aa27■■□□□ 1.91
RHBDD3-202ENST00000406335 STK31Q9BXU1 1019 aa27■■□□□ 1.91
RHBDD3-202ENST00000406335 COA1Q9GZY4 146 aa27■■□□□ 1.91
RHBDD3-202ENST00000406335 ZNF609O15014 1411 aa26.99■■□□□ 1.91
RHBDD3-202ENST00000406335 MED23Q9ULK4 1368 aa26.99■■□□□ 1.91
RHBDD3-202ENST00000406335 WNT10BO00744 389 aa26.99■■□□□ 1.91
RHBDD3-202ENST00000406335 SREBF2Q12772 1141 aa26.99■■□□□ 1.91
RHBDD3-202ENST00000406335 DACT2Q5SW24 774 aa26.99■■□□□ 1.91
RHBDD3-202ENST00000406335 STRIP1Q5VSL9 837 aa26.99■■□□□ 1.91
RHBDD3-202ENST00000406335 SASH1O94885 1247 aa26.98■■□□□ 1.91
RHBDD3-202ENST00000406335 TTLL5Q6EMB2 1281 aa26.98■■□□□ 1.91
RHBDD3-202ENST00000406335 KCNJ4P48050 445 aa26.97■■□□□ 1.91
RHBDD3-202ENST00000406335 TM4SF4P48230 202 aa26.97■■□□□ 1.91
RHBDD3-202ENST00000406335 CCDC27Q2M243 656 aa26.97■■□□□ 1.91
RHBDD3-202ENST00000406335 WWC1Q8IX03 1113 aa26.97■■□□□ 1.91
RHBDD3-202ENST00000406335 MPHOSPH8Q99549 860 aa26.97■■□□□ 1.91
RHBDD3-202ENST00000406335 LEMD3Q9Y2U8 911 aa26.97■■□□□ 1.91
RHBDD3-202ENST00000406335 SCN9AQ15858 1988 aa26.97■■□□□ 1.91
RHBDD3-202ENST00000406335 GPR25O00155 361 aa26.96■■□□□ 1.91
RHBDD3-202ENST00000406335 IGKV5-2P06315 115 aa26.96■■□□□ 1.91
RHBDD3-202ENST00000406335 KIAA0825Q8IV33 1275 aa26.96■■□□□ 1.91
RHBDD3-202ENST00000406335 PAPPA2Q9BXP8 1791 aa26.95■■□□□ 1.9
RHBDD3-202ENST00000406335 CWF19L2Q2TBE0 894 aaKnown RBP26.95■■□□□ 1.9
RHBDD3-202ENST00000406335 APOBEC3FQ8IUX4 373 aaKnown RBP26.95■■□□□ 1.9
RHBDD3-202ENST00000406335 ANKRD2Q9GZV1 360 aa26.95■■□□□ 1.9
RHBDD3-202ENST00000406335 MMP14P50281 582 aa26.94■■□□□ 1.9
RHBDD3-202ENST00000406335 PRPF38BQ5VTL8 546 aaKnown RBP26.94■■□□□ 1.9
RHBDD3-202ENST00000406335 UBE3BQ7Z3V4 1068 aa26.94■■□□□ 1.9
RHBDD3-202ENST00000406335 FAM9BQ8IZU0 186 aa26.94■■□□□ 1.9
RHBDD3-202ENST00000406335 TSPYL6Q8N831 410 aa26.94■■□□□ 1.9
RHBDD3-202ENST00000406335 TSR2Q969E8 191 aaKnown RBP26.94■■□□□ 1.9
RHBDD3-202ENST00000406335 SALL2Q9Y467 1007 aaPredicted RBP26.94■■□□□ 1.9
RHBDD3-202ENST00000406335 AKAP11Q9UKA4 1901 aa26.94■■□□□ 1.9
RHBDD3-202ENST00000406335 ZNF804BA4D1E1 1349 aa26.93■■□□□ 1.9
RHBDD3-202ENST00000406335 CACNA1FO60840 1977 aa26.93■■□□□ 1.9
RHBDD3-202ENST00000406335 FKTNO75072 461 aa26.93■■□□□ 1.9
RHBDD3-202ENST00000406335 GTF2IP78347 998 aa26.93■■□□□ 1.9
RHBDD3-202ENST00000406335 PTPN12Q05209 780 aaKnown RBP26.93■■□□□ 1.9
RHBDD3-202ENST00000406335 ANGEL1Q9UNK9 670 aaKnown RBP26.93■■□□□ 1.9
RHBDD3-202ENST00000406335 TXNRD3Q86VQ6 643 aa26.92■■□□□ 1.9
RHBDD3-202ENST00000406335 NEURL1BA8MQ27 555 aa26.91■■□□□ 1.9
RHBDD3-202ENST00000406335 ITGA6P23229 1130 aa26.91■■□□□ 1.9
RHBDD3-202ENST00000406335 FBXO46Q6PJ61 603 aaPredicted RBP26.91■■□□□ 1.9
RHBDD3-202ENST00000406335 DLGAP5Q15398 846 aa26.9■■□□□ 1.9
RHBDD3-202ENST00000406335 SLC10A4Q96EP9 437 aa26.9■■□□□ 1.9
RHBDD3-202ENST00000406335 H7C1W4 665 aa26.89■■□□□ 1.9
RHBDD3-202ENST00000406335 SLC4A2P04920 1241 aa26.89■■□□□ 1.9
RHBDD3-202ENST00000406335 ALDH1A1P00352 501 aa26.88■■□□□ 1.89
RHBDD3-202ENST00000406335 NCBP3Q53F19 620 aaKnown RBP26.88■■□□□ 1.89
RHBDD3-202ENST00000406335 NOM1Q5C9Z4 860 aaKnown RBP26.87■■□□□ 1.89
RHBDD3-202ENST00000406335 SPRYD7Q5W111 196 aa26.87■■□□□ 1.89
RHBDD3-202ENST00000406335 MYH16Q9H6N6 1097 aa26.87■■□□□ 1.89
RHBDD3-202ENST00000406335 IL16Q14005 1332 aa26.87■■□□□ 1.89
RHBDD3-202ENST00000406335 MYO1BO43795 1136 aa26.86■■□□□ 1.89
RHBDD3-202ENST00000406335 PPP1R12BO60237 982 aaPredicted RBP26.86■■□□□ 1.89
RHBDD3-202ENST00000406335 KLRK1P26718 216 aa26.86■■□□□ 1.89
RHBDD3-202ENST00000406335 TWISTNBQ3B726 338 aaPredicted RBP26.86■■□□□ 1.89
RHBDD3-202ENST00000406335 DEFB129Q9H1M3 183 aa26.86■■□□□ 1.89
RHBDD3-202ENST00000406335 FZD1Q9UP38 647 aa26.86■■□□□ 1.89
RHBDD3-202ENST00000406335 F8W031 263 aaPredicted RBP26.85■■□□□ 1.89
RHBDD3-202ENST00000406335 INHBEP58166 350 aa26.85■■□□□ 1.89
RHBDD3-202ENST00000406335 CHRNDQ07001 517 aa26.85■■□□□ 1.89
RHBDD3-202ENST00000406335 GCKRQ14397 625 aa26.85■■□□□ 1.89
RHBDD3-202ENST00000406335 G2E3Q7L622 706 aa26.85■■□□□ 1.89
RHBDD3-202ENST00000406335 CD209Q9NNX6 404 aa26.85■■□□□ 1.89
RHBDD3-202ENST00000406335 CHMP3Q9Y3E7 222 aa26.85■■□□□ 1.89
RHBDD3-202ENST00000406335 ANKRD18BA2A2Z9 1011 aa26.84■■□□□ 1.89
RHBDD3-202ENST00000406335 MANSC4A6NHS7 340 aaPredicted RBP26.84■■□□□ 1.89
RHBDD3-202ENST00000406335 FKBP5Q13451 457 aaPredicted RBP26.83■■□□□ 1.89
RHBDD3-202ENST00000406335 LDLRAD1Q5T700 205 aa26.83■■□□□ 1.89
RHBDD3-202ENST00000406335 R3HDMLQ9H3Y0 253 aa26.83■■□□□ 1.89
RHBDD3-202ENST00000406335 TRIM17Q9Y577 477 aa26.83■■□□□ 1.89
RHBDD3-202ENST00000406335 RBM5P52756 815 aaKnown RBP eCLIP26.82■■□□□ 1.88
RHBDD3-202ENST00000406335 PLA2G12BQ9BX93 195 aa26.82■■□□□ 1.88
RHBDD3-202ENST00000406335 VEZTQ9HBM0 779 aa26.82■■□□□ 1.88
RHBDD3-202ENST00000406335 TAF5LO75529 589 aa26.81■■□□□ 1.88
RHBDD3-202ENST00000406335 SUPT20HL1Q3ZLR7 823 aa26.81■■□□□ 1.88
RHBDD3-202ENST00000406335 IFNL1Q8IU54 200 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms