RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 BRINP3Q76B58 766 aa11.66□□□□□ -0.54
MSH2-202ENST00000406134 FAM200AQ8TCP9 573 aa11.66□□□□□ -0.54
MSH2-202ENST00000406134 OSBP2Q969R2 916 aa11.66□□□□□ -0.54
MSH2-202ENST00000406134 ISCA1Q9BUE6 129 aa11.66□□□□□ -0.54
MSH2-202ENST00000406134 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
MSH2-202ENST00000406134 TIAM2Q8IVF5 1701 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 PCDH11YQ9BZA8 1340 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 PDCP20941 246 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 EVCP57679 992 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 APOBRQ0VD83 1088 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 FBXL16Q8N461 479 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 NBPF3Q9H094 633 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 NUP62CLQ9H1M0 184 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 GPHNQ9NQX3 736 aaPredicted RBP11.65□□□□□ -0.54
MSH2-202ENST00000406134 CIAO1O76071 339 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 ADORA1P30542 326 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 MAP3K11Q16584 847 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 TTLL5Q6EMB2 1281 aa11.65□□□□□ -0.54
MSH2-202ENST00000406134 PDIA4P13667 645 aaKnown RBP11.65□□□□□ -0.55
MSH2-202ENST00000406134 ANO6Q4KMQ2 910 aa11.65□□□□□ -0.55
MSH2-202ENST00000406134 MYRIPQ8NFW9 859 aa11.65□□□□□ -0.55
MSH2-202ENST00000406134 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.55
MSH2-202ENST00000406134 NCOA5Q9HCD5 579 aaKnown RBP11.65□□□□□ -0.55
MSH2-202ENST00000406134 CWC25Q9NXE8 425 aaPredicted RBP11.65□□□□□ -0.55
MSH2-202ENST00000406134 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.55
MSH2-202ENST00000406134 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 COL16A1Q07092 1604 aaPredicted RBP11.64□□□□□ -0.55
MSH2-202ENST00000406134 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 EYA2O00167 538 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 ATF3P18847 181 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 IQCB1Q15051 598 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
MSH2-202ENST00000406134 ENGASEQ8NFI3 743 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 COL22A1Q8NFW1 1626 aaPredicted RBP11.64□□□□□ -0.55
MSH2-202ENST00000406134 ERVV-2B6SEH9 535 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 TDRD7Q8NHU6 1098 aaKnown RBP11.64□□□□□ -0.55
MSH2-202ENST00000406134 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
MSH2-202ENST00000406134 TSC1Q92574 1164 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 PDCL3Q9H2J4 239 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 PDIA3P30101 505 aaKnown RBP11.64□□□□□ -0.55
MSH2-202ENST00000406134 CCDC191Q8NCU4 936 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 LLPHQ9BRT6 129 aaKnown RBP11.64□□□□□ -0.55
MSH2-202ENST00000406134 NRBP1Q9UHY1 535 aa11.64□□□□□ -0.55
MSH2-202ENST00000406134 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
MSH2-202ENST00000406134 PTPDC1A2A3K4 754 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
MSH2-202ENST00000406134 CHST3Q7LGC8 479 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 HPS5Q9UPZ3 1129 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 ATRNO75882 1429 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 ANTXR2P58335 489 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 C11orf57Q6ZUT1 292 aaPredicted RBP11.63□□□□□ -0.55
MSH2-202ENST00000406134 RCOR1Q9UKL0 485 aa11.63□□□□□ -0.55
MSH2-202ENST00000406134 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
MSH2-202ENST00000406134 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 ZCRB1Q8TBF4 217 aaKnown RBP11.62□□□□□ -0.55
MSH2-202ENST00000406134 DENND2AQ9ULE3 1009 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 A0A087WWV3 80 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 PPFIA3O75145 1194 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 PTMAP06454 111 aaKnown RBP11.62□□□□□ -0.55
MSH2-202ENST00000406134 SYNE4Q8N205 404 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 USP28Q96RU2 1077 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 DDX19AQ9NUU7 478 aaKnown RBP11.62□□□□□ -0.55
MSH2-202ENST00000406134 CICQ96RK0 1608 aaPredicted RBP11.62□□□□□ -0.55
MSH2-202ENST00000406134 PTGS1P23219 599 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 PDE4CQ08493 712 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 CCDC144BQ3MJ40 725 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 PI16Q6UXB8 463 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 CCDC144CPQ8IYA2 1237 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 TNMDQ9H2S6 317 aa11.62□□□□□ -0.55
MSH2-202ENST00000406134 RNF113AO15541 343 aaKnown RBP11.61□□□□□ -0.55
MSH2-202ENST00000406134 CSF1RP07333 972 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 SPC24Q8NBT2 197 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 DISP2A7MBM2 1401 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 LRMPQ12912 555 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 VGLL2Q8N8G2 317 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 DNAJC25Q9H1X3 360 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 CCT2P78371 535 aaKnown RBP11.61□□□□□ -0.55
MSH2-202ENST00000406134 CADPS2Q86UW7 1296 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 MB21D2Q8IYB1 491 aaPredicted RBP11.61□□□□□ -0.55
MSH2-202ENST00000406134 NEUROD6Q96NK8 337 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 PLA2G12BQ9BX93 195 aa11.61□□□□□ -0.55
MSH2-202ENST00000406134 PUS7LQ9H0K6 701 aaKnown RBP11.61□□□□□ -0.55
MSH2-202ENST00000406134 ZSCAN16Q9H4T2 348 aaPredicted RBP11.61□□□□□ -0.55
MSH2-202ENST00000406134 ZNF75DP51815 510 aa11.6□□□□□ -0.55
MSH2-202ENST00000406134 DHX40Q8IX18 779 aaKnown RBP11.6□□□□□ -0.55
MSH2-202ENST00000406134 ROBO1Q9Y6N7 1651 aa11.6□□□□□ -0.55
MSH2-202ENST00000406134 HMGN5P82970 282 aaKnown RBP11.6□□□□□ -0.55
MSH2-202ENST00000406134 ZNF274Q96GC6 653 aaPredicted RBP11.6□□□□□ -0.55
MSH2-202ENST00000406134 DLEC1Q9Y238 1755 aa11.6□□□□□ -0.55
MSH2-202ENST00000406134 MYH14Q7Z406 1995 aaKnown RBP11.6□□□□□ -0.55
MSH2-202ENST00000406134 IFIT1P09914 478 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms