RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 WTIPA6NIX2 430 aaPredicted RBP15.13■□□□□ 0.01
LINC00339-201ENST00000404210 C6orf229H3BNL8 230 aa15.13■□□□□ 0.01
LINC00339-201ENST00000404210 SNAP23O00161 211 aa15.13■□□□□ 0.01
LINC00339-201ENST00000404210 UFL1O94874 794 aa15.13■□□□□ 0.01
LINC00339-201ENST00000404210 IFIT2P09913 472 aaKnown RBP15.13■□□□□ 0.01
LINC00339-201ENST00000404210 AACSQ86V21 672 aa15.13■□□□□ 0.01
LINC00339-201ENST00000404210 SNED1Q8TER0 1413 aa15.13■□□□□ 0.01
LINC00339-201ENST00000404210 LNPKQ9C0E8 428 aa15.13■□□□□ 0.01
LINC00339-201ENST00000404210 CCDC8Q9H0W5 538 aaPredicted RBP15.13■□□□□ 0.01
LINC00339-201ENST00000404210 LTBP1Q14766 1721 aa15.12■□□□□ 0.01
LINC00339-201ENST00000404210 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC00339-201ENST00000404210 C16orf71Q8IYS4 520 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-201ENST00000404210 XAGE2Q96GT9 111 aa15.12■□□□□ 0.01
LINC00339-201ENST00000404210 IRS2Q9Y4H2 1338 aa15.12■□□□□ 0.01
LINC00339-201ENST00000404210 FER1L6Q2WGJ9 1857 aa15.12■□□□□ 0.01
LINC00339-201ENST00000404210 ZNF609O15014 1411 aa15.11■□□□□ 0.01
LINC00339-201ENST00000404210 WASHC4Q2M389 1173 aa15.11■□□□□ 0.01
LINC00339-201ENST00000404210 CAVIN4Q5BKX8 364 aa15.11■□□□□ 0.01
LINC00339-201ENST00000404210 FBXO33Q7Z6M2 555 aa15.11■□□□□ 0.01
LINC00339-201ENST00000404210 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
LINC00339-201ENST00000404210 LTBP3Q9NS15 1303 aa15.11■□□□□ 0.01
LINC00339-201ENST00000404210 ZBTB22O15209 634 aa15.1■□□□□ 0.01
LINC00339-201ENST00000404210 CCDC158Q5M9N0 1113 aa15.1■□□□□ 0.01
LINC00339-201ENST00000404210 GORABQ5T7V8 394 aa15.1■□□□□ 0.01
LINC00339-201ENST00000404210 FAM84BQ96KN1 310 aaPredicted RBP15.1■□□□□ 0.01
LINC00339-201ENST00000404210 DBNDD2Q9BQY9 259 aa15.1■□□□□ 0.01
LINC00339-201ENST00000404210 BCL11AQ9H165 835 aa15.1■□□□□ 0.01
LINC00339-201ENST00000404210 DBNLQ9UJU6 430 aaKnown RBP15.1■□□□□ 0.01
LINC00339-201ENST00000404210 MED23Q9ULK4 1368 aa15.1■□□□□ 0.01
LINC00339-201ENST00000404210 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.011e-7■■■■□ 23.4
LINC00339-201ENST00000404210 PDE4AP27815 886 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 ADORA1P30542 326 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 HIBADHP31937 336 aaKnown RBP15.09■□□□□ 0.01
LINC00339-201ENST00000404210 BCAMP50895 628 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 GPR162Q16538 588 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 ARHGAP27Q6ZUM4 889 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 TXNRD3Q86VQ6 643 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 PLEKHM2Q8IWE5 1019 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 ZNF512BQ96KM6 892 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-201ENST00000404210 TAOK3Q9H2K8 898 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 STAP2Q9UGK3 403 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 SALL3Q9BXA9 1300 aa15.09■□□□□ 0.01
LINC00339-201ENST00000404210 DUOX1Q9NRD9 1551 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 NFKBIEO00221 500 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 RIMBP2O15034 1052 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 GRIN3BO60391 1043 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 KLRK1P26718 216 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 GYG1P46976 350 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
LINC00339-201ENST00000404210 KIAA2012Q0VF49 1180 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 CCDC102BQ68D86 513 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
LINC00339-201ENST00000404210 COA1Q9GZY4 146 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 OSBPL3Q9H4L5 887 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 TLR7Q9NYK1 1049 aaKnown RBP15.08■□□□□ 0
LINC00339-201ENST00000404210 TTC41PQ6P2S7 1318 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 ARAP2Q8WZ64 1704 aa15.08■□□□□ 0
LINC00339-201ENST00000404210 UQCRFS1P1P0C7P4 283 aa15.07■□□□□ 0
LINC00339-201ENST00000404210 MX1P20591 662 aa15.07■□□□□ 0
LINC00339-201ENST00000404210 PDE1AP54750 535 aa15.07■□□□□ 0
LINC00339-201ENST00000404210 ZNF804AQ7Z570 1209 aa15.07■□□□□ 0
LINC00339-201ENST00000404210 VPS37DQ86XT2 251 aa15.07■□□□□ 0
LINC00339-201ENST00000404210 OTUD7AQ8TE49 926 aaPredicted RBP15.07■□□□□ 0
LINC00339-201ENST00000404210 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00339-201ENST00000404210 GPATCH3Q96I76 525 aa15.07■□□□□ 0
LINC00339-201ENST00000404210 GPR101Q96P66 508 aaPredicted RBP15.07■□□□□ 0
LINC00339-201ENST00000404210 CD209Q9NNX6 404 aa15.07■□□□□ 0
LINC00339-201ENST00000404210 GNL3LQ9NVN8 582 aaKnown RBP15.07■□□□□ 0
LINC00339-201ENST00000404210 G3V3G9 751 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 ERC2O15083 957 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 PPIP5K2O43314 1243 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 IL1R1P14778 569 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 ATP5JP18859 108 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 ARID4AP29374 1257 aaPredicted RBP15.06■□□□□ 0
LINC00339-201ENST00000404210 IARSP41252 1262 aaKnown RBP15.06■□□□□ 0
LINC00339-201ENST00000404210 PHKA1P46020 1223 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 TTC39AQ5SRH9 613 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 DCAF8Q5TAQ9 597 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 PODNQ7Z5L7 613 aa15.06■□□□□ 0
LINC00339-201ENST00000404210 TDRD7Q8NHU6 1098 aaKnown RBP15.06■□□□□ 0
LINC00339-201ENST00000404210 ZNF277Q9NRM2 450 aaPredicted RBP15.06■□□□□ 0
LINC00339-201ENST00000404210 SEMA3EO15041 775 aa15.05■□□□□ -0
LINC00339-201ENST00000404210 AOC3Q16853 763 aa15.05■□□□□ -0
LINC00339-201ENST00000404210 AOX1Q06278 1338 aa15.05■□□□□ -0
LINC00339-201ENST00000404210 CCDC88AQ3V6T2 1871 aa15.04■□□□□ -0
LINC00339-201ENST00000404210 GLRX3O76003 335 aaKnown RBP15.04■□□□□ -0
LINC00339-201ENST00000404210 DOK7Q18PE1 504 aa15.04■□□□□ -0
LINC00339-201ENST00000404210 LARGE2Q8N3Y3 721 aa15.04■□□□□ -0
LINC00339-201ENST00000404210 DENND2AQ9ULE3 1009 aa15.04■□□□□ -0
LINC00339-201ENST00000404210 CHD4Q14839 1912 aa15.04■□□□□ -0
LINC00339-201ENST00000404210 LMNB1P20700 586 aa15.03■□□□□ -0
LINC00339-201ENST00000404210 RASSF7Q02833 373 aa15.03■□□□□ -0
LINC00339-201ENST00000404210 PI4K2BQ8TCG2 481 aa15.03■□□□□ -0
LINC00339-201ENST00000404210 JDP2Q8WYK2 163 aa15.03■□□□□ -0
LINC00339-201ENST00000404210 SBF1O95248 1867 aa15.03■□□□□ -0
LINC00339-201ENST00000404210 PDS5AQ29RF7 1337 aaKnown RBP15.02■□□□□ -0
LINC00339-201ENST00000404210 ECE2O60344 883 aa15.02■□□□□ -0
LINC00339-201ENST00000404210 FRAT2O75474 233 aaPredicted RBP15.02■□□□□ -0
LINC00339-201ENST00000404210 MCAMP43121 646 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms