RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 C15orf52Q6ZUT6 534 aaKnown RBP21.3■■□□□ 1
PTCHD3P3-201ENST00000403073 GLTPD2A6NH11 291 aa21.29■■□□□ 1
PTCHD3P3-201ENST00000403073 RAD17O75943 681 aa21.29■■□□□ 1
PTCHD3P3-201ENST00000403073 DDNO94850 711 aaPredicted RBP21.29■■□□□ 1
PTCHD3P3-201ENST00000403073 FGFR2P21802 821 aa21.29■■□□□ 1
PTCHD3P3-201ENST00000403073 CXCL9Q07325 125 aa21.29■■□□□ 1
PTCHD3P3-201ENST00000403073 PUM3Q15397 648 aaKnown RBP21.29■■□□□ 1
PTCHD3P3-201ENST00000403073 DPY19L2Q6NUT2 758 aa21.29■■□□□ 1
PTCHD3P3-201ENST00000403073 EXOC6BQ9Y2D4 811 aa21.29■■□□□ 1
PTCHD3P3-201ENST00000403073 GYG1P46976 350 aa21.28■■□□□ 1
PTCHD3P3-201ENST00000403073 COA1Q9GZY4 146 aa21.28■■□□□ 1
PTCHD3P3-201ENST00000403073 GJA3Q9Y6H8 435 aa21.28■■□□□ 1
PTCHD3P3-201ENST00000403073 ATP2B3Q16720 1220 aa21.27■■□□□ 1
PTCHD3P3-201ENST00000403073 LPIN2Q92539 896 aa21.27■■□□□ 1
PTCHD3P3-201ENST00000403073 FAM84BQ96KN1 310 aaPredicted RBP21.27■■□□□ 1
PTCHD3P3-201ENST00000403073 CD209Q9NNX6 404 aa21.27■■□□□ 1
PTCHD3P3-201ENST00000403073 CHD4Q14839 1912 aa21.26■□□□□ 0.99
PTCHD3P3-201ENST00000403073 IFIT1P09914 478 aaKnown RBP21.26■□□□□ 0.99
PTCHD3P3-201ENST00000403073 SLC5A1P13866 664 aa21.26■□□□□ 0.99
PTCHD3P3-201ENST00000403073 TIMM10P62072 90 aa21.26■□□□□ 0.99
PTCHD3P3-201ENST00000403073 CIAPIN1Q6FI81 312 aa21.26■□□□□ 0.99
PTCHD3P3-201ENST00000403073 PODNQ7Z5L7 613 aa21.26■□□□□ 0.99
PTCHD3P3-201ENST00000403073 ZNF784Q8NCA9 323 aaPredicted RBP21.26■□□□□ 0.99
PTCHD3P3-201ENST00000403073 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
PTCHD3P3-201ENST00000403073 HIBADHP31937 336 aaKnown RBP21.25■□□□□ 0.99
PTCHD3P3-201ENST00000403073 ZNF804AQ7Z570 1209 aa21.25■□□□□ 0.99
PTCHD3P3-201ENST00000403073 KDM2BQ8NHM5 1336 aa21.25■□□□□ 0.99
PTCHD3P3-201ENST00000403073 CCDC88AQ3V6T2 1871 aa21.24■□□□□ 0.99
PTCHD3P3-201ENST00000403073 APBB1O00213 710 aa21.24■□□□□ 0.99
PTCHD3P3-201ENST00000403073 BCAMP50895 628 aa21.24■□□□□ 0.99
PTCHD3P3-201ENST00000403073 TNIP1Q15025 636 aa21.24■□□□□ 0.99
PTCHD3P3-201ENST00000403073 FBXO33Q7Z6M2 555 aa21.24■□□□□ 0.99
PTCHD3P3-201ENST00000403073 GPC2Q8N158 579 aa21.24■□□□□ 0.99
PTCHD3P3-201ENST00000403073 AKAP2Q9Y2D5 859 aa21.24■□□□□ 0.99
PTCHD3P3-201ENST00000403073 TIAM2Q8IVF5 1701 aa21.24■□□□□ 0.99
PTCHD3P3-201ENST00000403073 A0A1B0GUL7 405 aa21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 PSMD14O00487 310 aa21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 ADORA1P30542 326 aa21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 AAMPQ13685 434 aa21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 CAVIN4Q5BKX8 364 aa21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 NEUROD6Q96NK8 337 aa21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 RRAGCQ9HB90 399 aa21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 GPBP1L1Q9HC44 474 aaPredicted RBP21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 NMRK2Q9NPI5 230 aa21.23■□□□□ 0.99
PTCHD3P3-201ENST00000403073 IL1R1P14778 569 aa21.22■□□□□ 0.99
PTCHD3P3-201ENST00000403073 HSP90AB4PQ58FF6 505 aa21.22■□□□□ 0.99
PTCHD3P3-201ENST00000403073 VPS37DQ86XT2 251 aa21.22■□□□□ 0.99
PTCHD3P3-201ENST00000403073 FBXW7Q969H0 707 aa21.22■□□□□ 0.99
PTCHD3P3-201ENST00000403073 A0A1B0GUL6 1792 aa21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 USP17L3A6NCW0 530 aa21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 USP17L4A6NCW7 530 aa21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 POTECB2RU33 542 aa21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 USP17L1Q7RTZ2 530 aa21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 ERC1Q8IUD2 1116 aa21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 TDRD7Q8NHU6 1098 aaKnown RBP21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 IQSEC3Q9UPP2 1182 aaPredicted RBP21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 ZBTB12Q9Y330 459 aaPredicted RBP21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 DICER1Q9UPY3 1922 aaKnown RBP21.21■□□□□ 0.99
PTCHD3P3-201ENST00000403073 VIL1P09327 827 aaKnown RBP21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 GTF2IP78347 998 aa21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 TNNI3KQ59H18 835 aa21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 RHPN1Q8TCX5 695 aa21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 XAGE2Q96GT9 111 aa21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 MXD3Q9BW11 206 aa21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 DCTPP1Q9H773 170 aa21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 JAG2Q9Y219 1238 aa21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 FPGT-TNNI3KV9GXZ4 949 aa21.2■□□□□ 0.98
PTCHD3P3-201ENST00000403073 RAB11FIP3O75154 756 aa21.19■□□□□ 0.98
PTCHD3P3-201ENST00000403073 GMPSP49915 693 aaPredicted RBP21.19■□□□□ 0.98
PTCHD3P3-201ENST00000403073 TTLL5Q6EMB2 1281 aa21.19■□□□□ 0.98
PTCHD3P3-201ENST00000403073 L3MBTL3Q96JM7 780 aaPredicted RBP21.19■□□□□ 0.98
PTCHD3P3-201ENST00000403073 BCL11AQ9H165 835 aa21.19■□□□□ 0.98
PTCHD3P3-201ENST00000403073 IL1RAPL2Q9NP60 686 aa21.19■□□□□ 0.98
PTCHD3P3-201ENST00000403073 GPR108Q9NPR9 543 aa21.19■□□□□ 0.98
PTCHD3P3-201ENST00000403073 SCNN1DP51172 638 aa21.18■□□□□ 0.98
PTCHD3P3-201ENST00000403073 DACT2Q5SW24 774 aa21.18■□□□□ 0.98
PTCHD3P3-201ENST00000403073 STRIP1Q5VSL9 837 aa21.18■□□□□ 0.98
PTCHD3P3-201ENST00000403073 EAF2Q96CJ1 260 aaPredicted RBP21.18■□□□□ 0.98
PTCHD3P3-201ENST00000403073 KIF1BPQ96EK5 621 aa21.18■□□□□ 0.98
PTCHD3P3-201ENST00000403073 FRAT2O75474 233 aaPredicted RBP21.17■□□□□ 0.98
PTCHD3P3-201ENST00000403073 VEGFAP15692 232 aaPredicted RBP21.17■□□□□ 0.98
PTCHD3P3-201ENST00000403073 PHKA1P46020 1223 aa21.17■□□□□ 0.98
PTCHD3P3-201ENST00000403073 CCDC102BQ68D86 513 aa21.17■□□□□ 0.98
PTCHD3P3-201ENST00000403073 RSBN1LQ6PCB5 846 aaPredicted RBP21.17■□□□□ 0.98
PTCHD3P3-201ENST00000403073 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
PTCHD3P3-201ENST00000403073 ZNF609O15014 1411 aa21.16■□□□□ 0.98
PTCHD3P3-201ENST00000403073 EPS15P42566 896 aa21.16■□□□□ 0.98
PTCHD3P3-201ENST00000403073 HDAC1Q13547 482 aaPredicted RBP21.16■□□□□ 0.98
PTCHD3P3-201ENST00000403073 GORABQ5T7V8 394 aa21.16■□□□□ 0.98
PTCHD3P3-201ENST00000403073 DBNDD2Q9BQY9 259 aa21.16■□□□□ 0.98
PTCHD3P3-201ENST00000403073 SHTN1A0MZ66 631 aa21.15■□□□□ 0.98
PTCHD3P3-201ENST00000403073 SMARCA5O60264 1052 aaPredicted RBP21.15■□□□□ 0.98
PTCHD3P3-201ENST00000403073 CHAF1AQ13111 956 aaPredicted RBP21.15■□□□□ 0.98
PTCHD3P3-201ENST00000403073 AACSQ86V21 672 aa21.15■□□□□ 0.98
PTCHD3P3-201ENST00000403073 TLR7Q9NYK1 1049 aaKnown RBP21.15■□□□□ 0.98
PTCHD3P3-201ENST00000403073 GPRC5DQ9NZD1 345 aa21.15■□□□□ 0.98
PTCHD3P3-201ENST00000403073 HACL1Q9UJ83 578 aa21.15■□□□□ 0.98
PTCHD3P3-201ENST00000403073 KIF3CO14782 793 aa21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 IGHDP01880 384 aa21.14■□□□□ 0.97
PTCHD3P3-201ENST00000403073 RPS12P25398 132 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms