RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 ZC3H12CQ9C0D7 883 aaKnown RBP33.07■■■□□ 2.88
CGREF1-204ENST00000402550 PPIP5K2O43314 1243 aa33.06■■■□□ 2.88
CGREF1-204ENST00000402550 TFCP2Q12800 502 aa33.06■■■□□ 2.88
CGREF1-204ENST00000402550 C9orf131Q5VYM1 1079 aa33.06■■■□□ 2.88
CGREF1-204ENST00000402550 RNF181Q9P0P0 153 aa33.06■■■□□ 2.88
CGREF1-204ENST00000402550 TXNRD3Q86VQ6 643 aa33.04■■■□□ 2.88
CGREF1-204ENST00000402550 LARGE2Q8N3Y3 721 aa33.04■■■□□ 2.88
CGREF1-204ENST00000402550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.04■■■□□ 2.88
CGREF1-204ENST00000402550 FGFR2P21802 821 aa33.03■■■□□ 2.88
CGREF1-204ENST00000402550 PUM3Q15397 648 aaKnown RBP33.03■■■□□ 2.88
CGREF1-204ENST00000402550 CLASRPQ8N2M8 674 aaKnown RBP33.03■■■□□ 2.88
CGREF1-204ENST00000402550 MED23Q9ULK4 1368 aa33.02■■■□□ 2.88
CGREF1-204ENST00000402550 IRS2Q9Y4H2 1338 aa33.02■■■□□ 2.88
CGREF1-204ENST00000402550 KLRK1P26718 216 aa33.02■■■□□ 2.88
CGREF1-204ENST00000402550 NUCB1Q02818 461 aa33.02■■■□□ 2.88
CGREF1-204ENST00000402550 C15orf52Q6ZUT6 534 aaKnown RBP33.02■■■□□ 2.88
CGREF1-204ENST00000402550 BCL11AQ9H165 835 aa33.02■■■□□ 2.88
CGREF1-204ENST00000402550 AKAP2Q9Y2D5 859 aa33.02■■■□□ 2.88
CGREF1-204ENST00000402550 CHD4Q14839 1912 aa33.01■■■□□ 2.88
CGREF1-204ENST00000402550 DICER1Q9UPY3 1922 aaKnown RBP33.01■■■□□ 2.88
CGREF1-204ENST00000402550 JDP2Q8WYK2 163 aa33.01■■■□□ 2.88
CGREF1-204ENST00000402550 IL1RAPL2Q9NP60 686 aa33.01■■■□□ 2.88
CGREF1-204ENST00000402550 CHD1LQ86WJ1 897 aa33■■■□□ 2.87
CGREF1-204ENST00000402550 COL4A5P29400 1685 aa33■■■□□ 2.87
CGREF1-204ENST00000402550 LPIN2Q92539 896 aa33■■■□□ 2.87
CGREF1-204ENST00000402550 SMARCA5O60264 1052 aaPredicted RBP32.99■■■□□ 2.87
CGREF1-204ENST00000402550 ATP2B3Q16720 1220 aa32.99■■■□□ 2.87
CGREF1-204ENST00000402550 GPR108Q9NPR9 543 aa32.99■■■□□ 2.87
CGREF1-204ENST00000402550 TIMM10P62072 90 aa32.98■■■□□ 2.87
CGREF1-204ENST00000402550 DOK7Q18PE1 504 aa32.98■■■□□ 2.87
CGREF1-204ENST00000402550 LNPKQ9C0E8 428 aa32.98■■■□□ 2.87
CGREF1-204ENST00000402550 IFIT1P09914 478 aaKnown RBP32.97■■■□□ 2.87
CGREF1-204ENST00000402550 TNNI3KQ59H18 835 aa32.96■■■□□ 2.87
CGREF1-204ENST00000402550 NIM1KQ8IY84 436 aa32.96■■■□□ 2.87
CGREF1-204ENST00000402550 DBNDD1Q9H9R9 158 aa32.96■■■□□ 2.87
CGREF1-204ENST00000402550 FPGT-TNNI3KV9GXZ4 949 aa32.96■■■□□ 2.87
CGREF1-204ENST00000402550 SLC5A1P13866 664 aa32.96■■■□□ 2.87
CGREF1-204ENST00000402550 FAM84BQ96KN1 310 aaPredicted RBP32.96■■■□□ 2.87
CGREF1-204ENST00000402550 A0A1B0GUL7 405 aa32.95■■■□□ 2.86
CGREF1-204ENST00000402550 G3V3G9 751 aa32.95■■■□□ 2.86
CGREF1-204ENST00000402550 FZD9O00144 591 aa32.95■■■□□ 2.86
CGREF1-204ENST00000402550 DCAF8Q5TAQ9 597 aa32.95■■■□□ 2.86
CGREF1-204ENST00000402550 AACSQ86V21 672 aa32.95■■■□□ 2.86
CGREF1-204ENST00000402550 ZNRF3Q9ULT6 936 aa32.95■■■□□ 2.86
CGREF1-204ENST00000402550 IFIT2P09913 472 aaKnown RBP32.94■■■□□ 2.86
CGREF1-204ENST00000402550 GYG1P46976 350 aa32.94■■■□□ 2.86
CGREF1-204ENST00000402550 ZNF609O15014 1411 aa32.93■■■□□ 2.86
CGREF1-204ENST00000402550 ECE2O60344 883 aa32.93■■■□□ 2.86
CGREF1-204ENST00000402550 NEUROD6Q96NK8 337 aa32.93■■■□□ 2.86
CGREF1-204ENST00000402550 COA1Q9GZY4 146 aa32.93■■■□□ 2.86
CGREF1-204ENST00000402550 PODNQ7Z5L7 613 aa32.92■■■□□ 2.86
CGREF1-204ENST00000402550 YDJCA8MPS7 323 aa32.92■■■□□ 2.86
CGREF1-204ENST00000402550 HIBADHP31937 336 aaKnown RBP32.92■■■□□ 2.86
CGREF1-204ENST00000402550 CAVIN4Q5BKX8 364 aa32.92■■■□□ 2.86
CGREF1-204ENST00000402550 ZNF804AQ7Z570 1209 aa32.92■■■□□ 2.86
CGREF1-204ENST00000402550 FBXO33Q7Z6M2 555 aa32.92■■■□□ 2.86
CGREF1-204ENST00000402550 EAF2Q96CJ1 260 aaPredicted RBP32.92■■■□□ 2.86
CGREF1-204ENST00000402550 CD209Q9NNX6 404 aa32.92■■■□□ 2.86
CGREF1-204ENST00000402550 ZC3H4Q9UPT8 1303 aaKnown RBP32.91■■■□□ 2.86
CGREF1-204ENST00000402550 BCAMP50895 628 aa32.9■■■□□ 2.86
CGREF1-204ENST00000402550 XAGE2Q96GT9 111 aa32.9■■■□□ 2.86
CGREF1-204ENST00000402550 KCNQ5Q9NR82 932 aa32.9■■■□□ 2.86
CGREF1-204ENST00000402550 ADORA1P30542 326 aa32.89■■■□□ 2.86
CGREF1-204ENST00000402550 ARAP2Q8WZ64 1704 aa32.89■■■□□ 2.86
CGREF1-204ENST00000402550 TIAM2Q8IVF5 1701 aa32.89■■■□□ 2.85
CGREF1-204ENST00000402550 CCDC8Q9H0W5 538 aaPredicted RBP32.88■■■□□ 2.85
CGREF1-204ENST00000402550 IL1R1P14778 569 aa32.87■■■□□ 2.85
CGREF1-204ENST00000402550 CXCL9Q07325 125 aa32.87■■■□□ 2.85
CGREF1-204ENST00000402550 GORABQ5T7V8 394 aa32.87■■■□□ 2.85
CGREF1-204ENST00000402550 VPS37DQ86XT2 251 aa32.87■■■□□ 2.85
CGREF1-204ENST00000402550 EIF6P56537 245 aaKnown RBP32.87■■■□□ 2.85
CGREF1-204ENST00000402550 GPATCH3Q96I76 525 aa32.87■■■□□ 2.85
CGREF1-204ENST00000402550 C16orf71Q8IYS4 520 aaPredicted RBP32.86■■■□□ 2.85
CGREF1-204ENST00000402550 TDRD7Q8NHU6 1098 aaKnown RBP32.86■■■□□ 2.85
CGREF1-204ENST00000402550 RAD17O75943 681 aa32.85■■■□□ 2.85
CGREF1-204ENST00000402550 SCN9AQ15858 1988 aa32.85■■■□□ 2.85
CGREF1-204ENST00000402550 DBNLQ9UJU6 430 aaKnown RBP32.84■■■□□ 2.85
CGREF1-204ENST00000402550 ZNF541Q9H0D2 1346 aa32.84■■■□□ 2.85
CGREF1-204ENST00000402550 CCDC102BQ68D86 513 aa32.83■■■□□ 2.85
CGREF1-204ENST00000402550 DPY19L2Q6NUT2 758 aa32.83■■■□□ 2.85
CGREF1-204ENST00000402550 DBNDD2Q9BQY9 259 aa32.83■■■□□ 2.85
CGREF1-204ENST00000402550 MX1P20591 662 aa32.83■■■□□ 2.85
CGREF1-204ENST00000402550 PHKA1P46020 1223 aa32.83■■■□□ 2.85
CGREF1-204ENST00000402550 CIAPIN1Q6FI81 312 aa32.83■■■□□ 2.85
CGREF1-204ENST00000402550 CCDC158Q5M9N0 1113 aa32.82■■■□□ 2.84
CGREF1-204ENST00000402550 TLR7Q9NYK1 1049 aaKnown RBP32.82■■■□□ 2.84
CGREF1-204ENST00000402550 IQSEC3Q9UPP2 1182 aaPredicted RBP32.82■■■□□ 2.84
CGREF1-204ENST00000402550 GLTPD2A6NH11 291 aa32.81■■■□□ 2.84
CGREF1-204ENST00000402550 USP17L3A6NCW0 530 aa32.8■■■□□ 2.84
CGREF1-204ENST00000402550 USP17L4A6NCW7 530 aa32.8■■■□□ 2.84
CGREF1-204ENST00000402550 TNIP1Q15025 636 aa32.8■■■□□ 2.84
CGREF1-204ENST00000402550 TTLL5Q6EMB2 1281 aa32.8■■■□□ 2.84
CGREF1-204ENST00000402550 USP17L1Q7RTZ2 530 aa32.8■■■□□ 2.84
CGREF1-204ENST00000402550 OTUD7AQ8TE49 926 aaPredicted RBP32.8■■■□□ 2.84
CGREF1-204ENST00000402550 GNL3LQ9NVN8 582 aaKnown RBP32.8■■■□□ 2.84
CGREF1-204ENST00000402550 PSMD14O00487 310 aa32.79■■■□□ 2.84
CGREF1-204ENST00000402550 DDNO94850 711 aaPredicted RBP32.79■■■□□ 2.84
CGREF1-204ENST00000402550 PDE4AP27815 886 aa32.79■■■□□ 2.84
CGREF1-204ENST00000402550 GPC2Q8N158 579 aa32.79■■■□□ 2.84
CGREF1-204ENST00000402550 TTC41PQ6P2S7 1318 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms