RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 USP17L1Q7RTZ2 530 aa15.36■□□□□ 0.05
LINC00544-201ENST00000400540 PI4KAP1Q8N8J0 262 aa15.36■□□□□ 0.05
LINC00544-201ENST00000400540 TTLL11Q8NHH1 800 aa15.36■□□□□ 0.05
LINC00544-201ENST00000400540 LAMB1P07942 1786 aa15.35■□□□□ 0.05
LINC00544-201ENST00000400540 NBPF9Q3BBW0 867 aa15.35■□□□□ 0.05
LINC00544-201ENST00000400540 PRAMEF18Q5VWM3 479 aa15.35■□□□□ 0.05
LINC00544-201ENST00000400540 G2E3Q7L622 706 aa15.35■□□□□ 0.05
LINC00544-201ENST00000400540 PODNQ7Z5L7 613 aa15.35■□□□□ 0.05
LINC00544-201ENST00000400540 CDC5LQ99459 802 aaKnown RBP15.35■□□□□ 0.05
LINC00544-201ENST00000400540 MINPP1Q9UNW1 487 aa15.35■□□□□ 0.05
LINC00544-201ENST00000400540 PITPNM2Q9BZ72 1349 aa15.35■□□□□ 0.05
LINC00544-201ENST00000400540 SLC34A2O95436 690 aa15.34■□□□□ 0.05
LINC00544-201ENST00000400540 DACT2Q5SW24 774 aa15.34■□□□□ 0.05
LINC00544-201ENST00000400540 TXNRD3Q86VQ6 643 aa15.34■□□□□ 0.05
LINC00544-201ENST00000400540 FBXW7Q969H0 707 aa15.34■□□□□ 0.05
LINC00544-201ENST00000400540 NEURL1BA8MQ27 555 aa15.33■□□□□ 0.04
LINC00544-201ENST00000400540 KLRK1P26718 216 aa15.33■□□□□ 0.04
LINC00544-201ENST00000400540 CCT4P50991 539 aaKnown RBP15.33■□□□□ 0.04
LINC00544-201ENST00000400540 SOX10P56693 466 aa15.33■□□□□ 0.04
LINC00544-201ENST00000400540 CCDC184Q52MB2 194 aa15.33■□□□□ 0.04
LINC00544-201ENST00000400540 UBE3BQ7Z3V4 1068 aa15.33■□□□□ 0.04
LINC00544-201ENST00000400540 BSDC1Q9NW68 430 aaPredicted RBP15.33■□□□□ 0.04
LINC00544-201ENST00000400540 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
LINC00544-201ENST00000400540 SASH1O94885 1247 aa15.32■□□□□ 0.04
LINC00544-201ENST00000400540 HTTP42858 3142 aa15.31■□□□□ 0.04
LINC00544-201ENST00000400540 CENPFP49454 3210 aa15.31■□□□□ 0.04
LINC00544-201ENST00000400540 PDE4DIPQ5VU43 2346 aa15.31■□□□□ 0.04
LINC00544-201ENST00000400540 FKBP1BP68106 108 aa15.31■□□□□ 0.04
LINC00544-201ENST00000400540 NEXNQ0ZGT2 675 aa15.31■□□□□ 0.04
LINC00544-201ENST00000400540 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
LINC00544-201ENST00000400540 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
LINC00544-201ENST00000400540 H7C1W4 665 aa15.3■□□□□ 0.04
LINC00544-201ENST00000400540 WNT10BO00744 389 aa15.3■□□□□ 0.04
LINC00544-201ENST00000400540 TWISTNBQ3B726 338 aaPredicted RBP15.3■□□□□ 0.04
LINC00544-201ENST00000400540 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
LINC00544-201ENST00000400540 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
LINC00544-201ENST00000400540 ITGA6P23229 1130 aa15.29■□□□□ 0.04
LINC00544-201ENST00000400540 IGHMBP2P38935 993 aaKnown RBP15.29■□□□□ 0.04
LINC00544-201ENST00000400540 CASP7P55210 303 aa15.29■□□□□ 0.04
LINC00544-201ENST00000400540 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
LINC00544-201ENST00000400540 TTLL12Q14166 644 aaPredicted RBP15.29■□□□□ 0.04
LINC00544-201ENST00000400540 STRIP1Q5VSL9 837 aa15.29■□□□□ 0.04
LINC00544-201ENST00000400540 CTU1Q7Z7A3 348 aaKnown RBP15.29■□□□□ 0.04
LINC00544-201ENST00000400540 COA1Q9GZY4 146 aa15.29■□□□□ 0.04
LINC00544-201ENST00000400540 ZNF804BA4D1E1 1349 aa15.28■□□□□ 0.04
LINC00544-201ENST00000400540 MYO3BQ8WXR4 1341 aa15.28■□□□□ 0.04
LINC00544-201ENST00000400540 TBC1D8O95759 1140 aa15.28■□□□□ 0.04
LINC00544-201ENST00000400540 GCKRQ14397 625 aa15.28■□□□□ 0.04
LINC00544-201ENST00000400540 KIAA0825Q8IV33 1275 aa15.28■□□□□ 0.04
LINC00544-201ENST00000400540 WWC1Q8IX03 1113 aa15.28■□□□□ 0.04
LINC00544-201ENST00000400540 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
LINC00544-201ENST00000400540 CHMP4AQ9BY43 222 aa15.28■□□□□ 0.04
LINC00544-201ENST00000400540 LEMD3Q9Y2U8 911 aa15.28■□□□□ 0.04
LINC00544-201ENST00000400540 SNAP23O00161 211 aa15.27■□□□□ 0.04
LINC00544-201ENST00000400540 FLIIQ13045 1269 aa15.27■□□□□ 0.04
LINC00544-201ENST00000400540 PRKG1Q13976 671 aa15.27■□□□□ 0.04
LINC00544-201ENST00000400540 TTLL5Q6EMB2 1281 aa15.27■□□□□ 0.04
LINC00544-201ENST00000400540 OGFOD1Q8N543 542 aa15.27■□□□□ 0.04
LINC00544-201ENST00000400540 PLA2G12BQ9BX93 195 aa15.27■□□□□ 0.04
LINC00544-201ENST00000400540 FZD1Q9UP38 647 aa15.27■□□□□ 0.04
LINC00544-201ENST00000400540 SSC5DA1L4H1 1573 aa15.27■□□□□ 0.03
LINC00544-201ENST00000400540 BRCA2P51587 3418 aa15.26■□□□□ 0.03
LINC00544-201ENST00000400540 GTF2IP78347 998 aa15.26■□□□□ 0.03
LINC00544-201ENST00000400540 CHRNDQ07001 517 aa15.26■□□□□ 0.03
LINC00544-201ENST00000400540 CCDC27Q2M243 656 aa15.26■□□□□ 0.03
LINC00544-201ENST00000400540 ZNF296Q8WUU4 475 aaPredicted RBP15.26■□□□□ 0.03
LINC00544-201ENST00000400540 FANCIQ9NVI1 1328 aa15.25■□□□□ 0.03
LINC00544-201ENST00000400540 IRS2Q9Y4H2 1338 aa15.25■□□□□ 0.03
LINC00544-201ENST00000400540 CSF1RP07333 972 aa15.25■□□□□ 0.03
LINC00544-201ENST00000400540 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
LINC00544-201ENST00000400540 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
LINC00544-201ENST00000400540 ZBED3Q96IU2 234 aaPredicted RBP15.25■□□□□ 0.03
LINC00544-201ENST00000400540 MPHOSPH8Q99549 860 aa15.25■□□□□ 0.03
LINC00544-201ENST00000400540 ANKRD2Q9GZV1 360 aa15.25■□□□□ 0.03
LINC00544-201ENST00000400540 HPS5Q9UPZ3 1129 aa15.25■□□□□ 0.03
LINC00544-201ENST00000400540 PCDHAC2Q9Y5I4 1007 aa15.25■□□□□ 0.03
LINC00544-201ENST00000400540 MKI67P46013 3256 aaKnown RBP15.24■□□□□ 0.03
LINC00544-201ENST00000400540 TAF5LO75529 589 aa15.24■□□□□ 0.03
LINC00544-201ENST00000400540 NF2P35240 595 aa15.24■□□□□ 0.03
LINC00544-201ENST00000400540 KCNJ4P48050 445 aa15.24■□□□□ 0.03
LINC00544-201ENST00000400540 TM4SF4P48230 202 aa15.24■□□□□ 0.03
LINC00544-201ENST00000400540 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
LINC00544-201ENST00000400540 HELBQ8NG08 1087 aaPredicted RBP15.24■□□□□ 0.03
LINC00544-201ENST00000400540 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
LINC00544-201ENST00000400540 CD209Q9NNX6 404 aa15.24■□□□□ 0.03
LINC00544-201ENST00000400540 COL1A1P02452 1464 aaPredicted RBP15.24■□□□□ 0.03
LINC00544-201ENST00000400540 APOBEC3FQ8IUX4 373 aaKnown RBP15.23■□□□□ 0.03
LINC00544-201ENST00000400540 LINS1Q8NG48 757 aa15.23■□□□□ 0.03
LINC00544-201ENST00000400540 R3HDMLQ9H3Y0 253 aa15.23■□□□□ 0.03
LINC00544-201ENST00000400540 MYH16Q9H6N6 1097 aa15.23■□□□□ 0.03
LINC00544-201ENST00000400540 HDAC9Q9UKV0 1011 aa15.23■□□□□ 0.03
LINC00544-201ENST00000400540 AOX1Q06278 1338 aa15.22■□□□□ 0.03
LINC00544-201ENST00000400540 IL16Q14005 1332 aa15.22■□□□□ 0.03
LINC00544-201ENST00000400540 ANKRD18BA2A2Z9 1011 aa15.22■□□□□ 0.03
LINC00544-201ENST00000400540 GPR25O00155 361 aa15.22■□□□□ 0.03
LINC00544-201ENST00000400540 FOXO4P98177 505 aa15.22■□□□□ 0.03
LINC00544-201ENST00000400540 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.22■□□□□ 0.03
LINC00544-201ENST00000400540 ANGEL1Q9UNK9 670 aaKnown RBP15.22■□□□□ 0.03
LINC00544-201ENST00000400540 JAG2Q9Y219 1238 aa15.22■□□□□ 0.03
LINC00544-201ENST00000400540 RBBP6Q7Z6E9 1792 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms