RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 PIH1D3Q9NQM4 214 aaKnown RBP14.21□□□□□ -0.13
SKA3-203ENST00000400018 MYO5AQ9Y4I1 1855 aaKnown RBP14.21□□□□□ -0.13
SKA3-203ENST00000400018 CYP2E1P05181 493 aaPredicted RBP14.21□□□□□ -0.13
SKA3-203ENST00000400018 KCNQ5Q9NR82 932 aa14.21□□□□□ -0.13
SKA3-203ENST00000400018 TAF6LQ9Y6J9 622 aa14.21□□□□□ -0.13
SKA3-203ENST00000400018 PTH1RQ03431 593 aa14.21□□□□□ -0.14
SKA3-203ENST00000400018 LARP6Q9BRS8 491 aaKnown RBP14.21□□□□□ -0.14
SKA3-203ENST00000400018 MXD3Q9BW11 206 aa14.21□□□□□ -0.14
SKA3-203ENST00000400018 POLLQ9UGP5 575 aa14.21□□□□□ -0.14
SKA3-203ENST00000400018 C6orf229H3BNL8 230 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 ERC2O15083 957 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 IDH1O75874 414 aaKnown RBP14.2□□□□□ -0.14
SKA3-203ENST00000400018 ATP5JP18859 108 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 CNTROBQ8N137 903 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 GPATCH3Q96I76 525 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 PAG1Q9NWQ8 432 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 HMG20BQ9P0W2 317 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 ABCF2Q9UG63 623 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 PALD1Q9ULE6 856 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 TTC41PQ6P2S7 1318 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 MROH5Q6ZUA9 1318 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 FRAT2O75474 233 aaPredicted RBP14.2□□□□□ -0.14
SKA3-203ENST00000400018 GRIK5Q16478 980 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 CRY2Q49AN0 593 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 CCDC158Q5M9N0 1113 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 VPS53Q5VIR6 699 aa14.2□□□□□ -0.14
SKA3-203ENST00000400018 FAM84BQ96KN1 310 aaPredicted RBP14.2□□□□□ -0.14
SKA3-203ENST00000400018 C21orf2O43822 256 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 UFL1O94874 794 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 STK11IPQ8N1F8 1099 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 FLAD1Q8NFF5 587 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 LPIN2Q92539 896 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 BRIP1Q9BX63 1249 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 C22orf23Q9BZE7 217 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 CPA1P15085 419 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 SLC4A8Q2Y0W8 1093 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 NOL8Q76FK4 1167 aaKnown RBP14.19□□□□□ -0.14
SKA3-203ENST00000400018 VPS37DQ86XT2 251 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 FBXW7Q969H0 707 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 AKAP2Q9Y2D5 859 aa14.19□□□□□ -0.14
SKA3-203ENST00000400018 SLC5A1P13866 664 aa14.18□□□□□ -0.14
SKA3-203ENST00000400018 DPEP1P16444 411 aa14.18□□□□□ -0.14
SKA3-203ENST00000400018 WASHC4Q2M389 1173 aa14.18□□□□□ -0.14
SKA3-203ENST00000400018 HAUS7Q99871 368 aa14.18□□□□□ -0.14
SKA3-203ENST00000400018 DIAPH3Q9NSV4 1193 aa14.18□□□□□ -0.14
SKA3-203ENST00000400018 ZNF804BA4D1E1 1349 aa14.18□□□□□ -0.14
SKA3-203ENST00000400018 RBM17Q96I25 401 aaKnown RBP14.18□□□□□ -0.14
SKA3-203ENST00000400018 PPEF1O14829 653 aaPredicted RBP14.17□□□□□ -0.14
SKA3-203ENST00000400018 CD2BP2O95400 341 aaKnown RBP14.17□□□□□ -0.14
SKA3-203ENST00000400018 PRPF40BQ6NWY9 871 aaKnown RBP14.17□□□□□ -0.14
SKA3-203ENST00000400018 COL11A2P13942 1736 aaPredicted RBP14.17□□□□□ -0.14
SKA3-203ENST00000400018 COL1A1P02452 1464 aaPredicted RBP14.17□□□□□ -0.14
SKA3-203ENST00000400018 NLGN2Q8NFZ4 835 aa14.17□□□□□ -0.14
SKA3-203ENST00000400018 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
SKA3-203ENST00000400018 MIGA1Q8NAN2 632 aa14.16□□□□□ -0.14
SKA3-203ENST00000400018 AK9Q5TCS8 1911 aa14.16□□□□□ -0.14
SKA3-203ENST00000400018 M0R2C6 588 aa14.16□□□□□ -0.14
SKA3-203ENST00000400018 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
SKA3-203ENST00000400018 PUS7LQ9H0K6 701 aaKnown RBP14.16□□□□□ -0.14
SKA3-203ENST00000400018 H0YIN7 160 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 SPATA5Q8NB90 893 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 OSBP2Q969R2 916 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 DBNDD1Q9H9R9 158 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 SLX4Q8IY92 1834 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 F8W031 263 aaPredicted RBP14.15□□□□□ -0.14
SKA3-203ENST00000400018 ADGRA1Q86SQ6 560 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 TCEANC2Q96MN5 208 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 USP26Q9BXU7 913 aa14.15□□□□□ -0.14
SKA3-203ENST00000400018 PRDX5P30044 214 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 TBC1D32Q96NH3 1257 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 GPR108Q9NPR9 543 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 RTL9Q8NET4 1388 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 HSP90B1P14625 803 aaKnown RBP14.14□□□□□ -0.15
SKA3-203ENST00000400018 KCNA3P22001 575 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 EVX2Q03828 476 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 SLC9C2Q5TAH2 1124 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 TBC1D16Q8TBP0 767 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 KIF2CQ99661 725 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 LRP5O75197 1615 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 PDE6BP35913 854 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 TTLL5Q6EMB2 1281 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 RASEFQ8IZ41 740 aa14.14□□□□□ -0.15
SKA3-203ENST00000400018 UPF3BQ9BZI7 483 aaKnown RBP14.14□□□□□ -0.15
SKA3-203ENST00000400018 AKAP11Q9UKA4 1901 aa14.13□□□□□ -0.15
SKA3-203ENST00000400018 SGSM2O43147 1006 aa14.13□□□□□ -0.15
SKA3-203ENST00000400018 MAGEB6Q8N7X4 407 aa14.13□□□□□ -0.15
SKA3-203ENST00000400018 KBTBD3Q8NAB2 608 aa14.13□□□□□ -0.15
SKA3-203ENST00000400018 ZNF384Q8TF68 577 aa14.13□□□□□ -0.15
SKA3-203ENST00000400018 MASTLQ96GX5 879 aa14.13□□□□□ -0.15
SKA3-203ENST00000400018 PCNTO95613 3336 aa14.13□□□□□ -0.15
SKA3-203ENST00000400018 NPR1P16066 1061 aa14.13□□□□□ -0.15
SKA3-203ENST00000400018 HIBADHP31937 336 aaKnown RBP14.13□□□□□ -0.15
SKA3-203ENST00000400018 KLRG2A4D1S0 409 aaPredicted RBP14.12□□□□□ -0.15
SKA3-203ENST00000400018 HOXA10P31260 410 aaPredicted RBP14.12□□□□□ -0.15
SKA3-203ENST00000400018 INCENPQ9NQS7 918 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 DENND2AQ9ULE3 1009 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms