RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ELP1O95163 1332 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 LRRC37A3O60309 1634 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 GLRX3O76003 335 aaKnown RBP19.88■□□□□ 0.77
PTPRA-205ENST00000399903 MST1RQ04912 1400 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 GPS2Q13227 327 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 E4F1Q66K89 784 aaPredicted RBP19.88■□□□□ 0.77
PTPRA-205ENST00000399903 FAM208AQ9UK61 1670 aaKnown RBP19.88■□□□□ 0.77
PTPRA-205ENST00000399903 GOLGA8FQ08AF8 430 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 GOLGA8DPQ0D2H9 430 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 RNF20Q5VTR2 975 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 KSR2Q6VAB6 950 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 RASSF4Q9H2L5 321 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 SLC52A2Q9HAB3 445 aa19.88■□□□□ 0.77
PTPRA-205ENST00000399903 TOM1L2Q6ZVM7 507 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 SUCLG2Q96I99 432 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 MYD88Q99836 296 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 LCMT1Q9UIC8 334 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 ZNF335Q9H4Z2 1342 aaPredicted RBP19.87■□□□□ 0.77
PTPRA-205ENST00000399903 NMIQ13287 307 aaPredicted RBP19.87■□□□□ 0.77
PTPRA-205ENST00000399903 ZSCAN26Q16670 478 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 CCDC8Q9H0W5 538 aaPredicted RBP19.87■□□□□ 0.77
PTPRA-205ENST00000399903 TOMM22Q9NS69 142 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 MEGF6O75095 1541 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 H2AFXP16104 143 aaPredicted RBP19.87■□□□□ 0.77
PTPRA-205ENST00000399903 PSMA5P28066 241 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 AACSQ86V21 672 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 FSIP1Q8NA03 581 aa19.87■□□□□ 0.77
PTPRA-205ENST00000399903 XPO4Q9C0E2 1151 aaKnown RBP19.87■□□□□ 0.77
PTPRA-205ENST00000399903 PDIA6Q15084 440 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 FSD1Q9BTV5 496 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 BOLA2Q9H3K6 86 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 DNAJC5Q9H3Z4 198 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 BRINP3Q76B58 766 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 TTC5Q8N0Z6 440 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 TSPYL1Q9H0U9 437 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 BICC1Q9H694 974 aaKnown RBP19.86■□□□□ 0.77
PTPRA-205ENST00000399903 ANO10Q9NW15 660 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 SLC27A2O14975 620 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 SLFNL1Q499Z3 407 aa19.86■□□□□ 0.77
PTPRA-205ENST00000399903 MED1Q15648 1581 aaPredicted RBP19.85■□□□□ 0.77
PTPRA-205ENST00000399903 KIF2AO00139 706 aaPredicted RBP19.85■□□□□ 0.77
PTPRA-205ENST00000399903 CDC25BP30305 580 aa19.85■□□□□ 0.77
PTPRA-205ENST00000399903 TXLNBQ8N3L3 684 aa19.85■□□□□ 0.77
PTPRA-205ENST00000399903 IFNL2Q8IZJ0 200 aa19.85■□□□□ 0.77
PTPRA-205ENST00000399903 LMOD1P29536 600 aaPredicted RBP19.84■□□□□ 0.77
PTPRA-205ENST00000399903 EVCP57679 992 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 HSP90AA4PQ58FG1 418 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 GOLPH3LQ9H4A5 285 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 CABP4P57796 275 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 CFAP45Q9UL16 551 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 KDM6AO15550 1401 aaPredicted RBP19.84■□□□□ 0.77
PTPRA-205ENST00000399903 ANKRD65E5RJM6 399 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 IGKV5-2P06315 115 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 POLA2Q14181 598 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 TAF7LQ5H9L4 462 aa19.84■□□□□ 0.77
PTPRA-205ENST00000399903 DHX40Q8IX18 779 aaKnown RBP19.84■□□□□ 0.77
PTPRA-205ENST00000399903 GSDMDP57764 484 aa19.83■□□□□ 0.77
PTPRA-205ENST00000399903 SF3A1Q15459 793 aaKnown RBP19.83■□□□□ 0.77
PTPRA-205ENST00000399903 GPATCH3Q96I76 525 aa19.83■□□□□ 0.77
PTPRA-205ENST00000399903 KAZALD1Q96I82 304 aa19.83■□□□□ 0.77
PTPRA-205ENST00000399903 FAM53CQ9NYF3 392 aa19.83■□□□□ 0.77
PTPRA-205ENST00000399903 A0A1B0GVL5 298 aa19.83■□□□□ 0.76
PTPRA-205ENST00000399903 HOXB7P09629 217 aa19.83■□□□□ 0.76
PTPRA-205ENST00000399903 SMC1AQ14683 1233 aaKnown RBP19.83■□□□□ 0.76
PTPRA-205ENST00000399903 NECTIN1Q15223 517 aa19.83■□□□□ 0.76
PTPRA-205ENST00000399903 EPHA10Q5JZY3 1008 aa19.83■□□□□ 0.76
PTPRA-205ENST00000399903 DDX21Q9NR30 783 aaKnown RBP eCLIP19.83■□□□□ 0.76
PTPRA-205ENST00000399903 ECHDC1Q9NTX5 307 aa19.83■□□□□ 0.76
PTPRA-205ENST00000399903 NDUFB9Q9Y6M9 179 aa19.83■□□□□ 0.76
PTPRA-205ENST00000399903 AOX1Q06278 1338 aa19.83■□□□□ 0.76
PTPRA-205ENST00000399903 MYO1CO00159 1063 aa19.82■□□□□ 0.76
PTPRA-205ENST00000399903 CCT2P78371 535 aaKnown RBP19.82■□□□□ 0.76
PTPRA-205ENST00000399903 ORC3Q9UBD5 711 aaPredicted RBP19.82■□□□□ 0.76
PTPRA-205ENST00000399903 GRM8O00222 908 aa19.82■□□□□ 0.76
PTPRA-205ENST00000399903 ARMCX5Q6P1M9 558 aa19.82■□□□□ 0.76
PTPRA-205ENST00000399903 NAT10Q9H0A0 1025 aaKnown RBP19.82■□□□□ 0.76
PTPRA-205ENST00000399903 UTP14AQ9BVJ6 771 aaKnown RBP19.82■□□□□ 0.76
PTPRA-205ENST00000399903 TLR7Q9NYK1 1049 aaKnown RBP19.82■□□□□ 0.76
PTPRA-205ENST00000399903 KAT6BQ8WYB5 2073 aa19.82■□□□□ 0.76
PTPRA-205ENST00000399903 SPATA31A3Q5VYP0 1347 aa19.81■□□□□ 0.76
PTPRA-205ENST00000399903 SARM1Q6SZW1 724 aa19.81■□□□□ 0.76
PTPRA-205ENST00000399903 EDC3Q96F86 508 aaKnown RBP19.81■□□□□ 0.76
PTPRA-205ENST00000399903 SLIT3O75094 1523 aa19.81■□□□□ 0.76
PTPRA-205ENST00000399903 IL17RAQ96F46 866 aa19.81■□□□□ 0.76
PTPRA-205ENST00000399903 A0A0D9SFI3 127 aa19.81■□□□□ 0.76
PTPRA-205ENST00000399903 RBM43Q6ZSC3 357 aaKnown RBP19.81■□□□□ 0.76
PTPRA-205ENST00000399903 TM6SF1Q9BZW5 370 aa19.81■□□□□ 0.76
PTPRA-205ENST00000399903 CAVIN2O95810 425 aa19.8■□□□□ 0.76
PTPRA-205ENST00000399903 RPS6KB1P23443 525 aa19.8■□□□□ 0.76
PTPRA-205ENST00000399903 TOB2Q14106 344 aaPredicted RBP19.8■□□□□ 0.76
PTPRA-205ENST00000399903 MCM6Q14566 821 aa19.8■□□□□ 0.76
PTPRA-205ENST00000399903 ANKRD1Q15327 319 aa19.8■□□□□ 0.76
PTPRA-205ENST00000399903 DPCR1Q3MIW9 517 aa19.8■□□□□ 0.76
PTPRA-205ENST00000399903 PDILTQ8N807 584 aa19.8■□□□□ 0.76
PTPRA-205ENST00000399903 USP28Q96RU2 1077 aa19.8■□□□□ 0.76
PTPRA-205ENST00000399903 A0A0G2JS52 829 aa19.79■□□□□ 0.76
PTPRA-205ENST00000399903 EPB41L2O43491 1005 aaKnown RBP19.79■□□□□ 0.76
PTPRA-205ENST00000399903 SASH3O75995 380 aa19.79■□□□□ 0.76
PTPRA-205ENST00000399903 DDX58O95786 925 aaKnown RBP19.79■□□□□ 0.76
PTPRA-205ENST00000399903 GTF2A1P52655 376 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms