RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 BRD3Q15059 726 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 CDC37Q16543 378 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 BRDTQ58F21 947 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 PDXDC1Q6P996 788 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 GLYCTKQ8IVS8 523 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 ZNF700Q9H0M5 742 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 DDX41Q9UJV9 622 aaKnown RBP7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 MRPS23Q9Y3D9 190 aaKnown RBP7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 ADAMTS13Q76LX8 1427 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 TRAPPC10P48553 1259 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 PHACTR3Q96KR7 559 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 PPCSQ9HAB8 311 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 NPDC1Q9NQX5 325 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 MAPK8IP3Q9UPT6 1336 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 SEC13P55735 322 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 DSG2Q14126 1118 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 DIXDC1Q155Q3 683 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 ACBD5Q5T8D3 534 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 NUTM2GQ5VZR2 741 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 RSBN1LQ6PCB5 846 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 CLIC5Q9NZA1 410 aa7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 NKTRP30414 1462 aaKnown RBP7.49□□□□□ -1.21
TRAPPC13-202ENST00000399438 PRSS47A8MTI9 375 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 PRKAR2BP31323 418 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 KRT24Q2M2I5 525 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 TMC4Q7Z404 712 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 SUGP1Q8IWZ8 645 aaKnown RBP7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 SSH1Q8WYL5 1049 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 FAM126AQ9BYI3 521 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 ZNF69Q9UC07 566 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 PCDHGB7Q9Y5F8 929 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L3A6NCW0 530 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L4A6NCW7 530 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 NPHP1O15259 732 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 NR1I2O75469 434 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 MYL1P05976 194 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 RBP3P10745 1247 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 MASP1P48740 699 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L2Q6R6M4 530 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L1Q7RTZ2 530 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 JAMLQ86YT9 394 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 CCDC89Q8N998 374 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 SLC26A8Q96RN1 970 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 CNTN3Q9P232 1028 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 STRCQ7RTU9 1775 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 C21orf2O43822 256 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 ANKLE2Q86XL3 938 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 TRMT2AQ8IZ69 625 aaKnown RBP7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 TRIM44Q96DX7 344 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 FANCLQ9NW38 375 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 ASAP1Q9ULH1 1129 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 MYOM1P52179 1685 aa7.48□□□□□ -1.21
TRAPPC13-202ENST00000399438 FRAT2O75474 233 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 MYRIPQ8NFW9 859 aa7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 AGBL1Q96MI9 1066 aa7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 POLG2Q9UHN1 485 aa7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 NOB1Q9ULX3 412 aaKnown RBP7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 PPP2R3BQ9Y5P8 575 aa7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 KNDC1Q76NI1 1749 aa7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 NPHP4O75161 1426 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 HCLS1P14317 486 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 TMPOP42166 694 aaKnown RBP7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 KIAA0907Q7Z7F0 614 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 TSPYL6Q8N831 410 aa7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 INSRP06213 1382 aa7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 ATAD2Q6PL18 1390 aa7.47□□□□□ -1.21
TRAPPC13-202ENST00000399438 CDC45O75419 566 aa7.46□□□□□ -1.21
TRAPPC13-202ENST00000399438 FMR1Q06787 632 aaKnown RBP eCLIP7.46□□□□□ -1.21
TRAPPC13-202ENST00000399438 PPP4R4Q6NUP7 873 aa7.46□□□□□ -1.21
TRAPPC13-202ENST00000399438 ERAP2Q6P179 960 aa7.46□□□□□ -1.21
TRAPPC13-202ENST00000399438 IFNL3Q8IZI9 196 aa7.46□□□□□ -1.21
TRAPPC13-202ENST00000399438 MIS18AQ9NYP9 233 aa7.46□□□□□ -1.21
TRAPPC13-202ENST00000399438 TRIM35Q9UPQ4 493 aa7.46□□□□□ -1.21
TRAPPC13-202ENST00000399438 MAP3K7O43318 606 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 POU3F3P20264 500 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 DAB2P98082 770 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 PPP2R5AQ15172 486 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 ARHGEF28Q8N1W1 1705 aaKnown RBP7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 TEX19Q8NA77 164 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 FAM200AQ8TCP9 573 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 DDX12PQ92771 950 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 SORBS3O60504 671 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 TRIM27P14373 513 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 TMC7Q7Z402 723 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 C14orf80Q86SX3 495 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 DUSP9Q99956 384 aaKnown RBP7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 DNAJC25Q9H1X3 360 aa7.46□□□□□ -1.22
TRAPPC13-202ENST00000399438 DLC1Q96QB1 1528 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 METP08581 1390 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 PTGER2P43116 358 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 GPSM2P81274 684 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 METTL3Q86U44 580 aaKnown RBP7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 TMEM57Q8N5G2 664 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 KIAA1958Q8N8K9 716 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 EPS8L1Q8TE68 723 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 E2F7Q96AV8 911 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 TMX1Q9H3N1 280 aa7.45□□□□□ -1.22
TRAPPC13-202ENST00000399438 ABCF2Q9UG63 623 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms