RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 THOC1Q96FV9 657 aaKnown RBP12.72□□□□□ -0.37
ITSN1-207ENST00000399338 THUMPD2Q9BTF0 503 aaKnown RBP12.72□□□□□ -0.37
ITSN1-207ENST00000399338 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
ITSN1-207ENST00000399338 FERMT3Q86UX7 667 aa12.72□□□□□ -0.37
ITSN1-207ENST00000399338 ANKRD18AQ8IVF6 992 aa12.72□□□□□ -0.37
ITSN1-207ENST00000399338 RPGRIP1LQ68CZ1 1315 aa12.72□□□□□ -0.37
ITSN1-207ENST00000399338 CDHR2Q9BYE9 1310 aa12.72□□□□□ -0.37
ITSN1-207ENST00000399338 A0A1B0GUA9 196 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 LRRIQ3A6PVS8 624 aaPredicted RBP12.71□□□□□ -0.37
ITSN1-207ENST00000399338 TLDC1Q6P9B6 456 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 ANO10Q9NW15 660 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
ITSN1-207ENST00000399338 MYO3AQ8NEV4 1616 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 ZSCAN12O43309 604 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 AP1G2O75843 785 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 CHMP4BP1P59074 171 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 TSHZ3Q63HK5 1081 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 SRGAP1Q7Z6B7 1085 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 CEP112Q8N8E3 955 aa12.71□□□□□ -0.37
ITSN1-207ENST00000399338 RPS6KA3P51812 740 aa12.71□□□□□ -0.38
ITSN1-207ENST00000399338 IFNKQ9P0W0 207 aa12.71□□□□□ -0.38
ITSN1-207ENST00000399338 CPSF2Q9P2I0 782 aaKnown RBP12.71□□□□□ -0.38
ITSN1-207ENST00000399338 NRXN1Q9ULB1 1477 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 SETD1AO15047 1707 aaKnown RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 SNUPNO95149 360 aaKnown RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 GNG11P61952 73 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 SLC5A9Q2M3M2 681 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 LARP1BQ659C4 914 aaKnown RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 PAIP2Q9BPZ3 127 aaKnown RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 SH2B1Q9NRF2 756 aaPredicted RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 SBNO2Q9Y2G9 1366 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 CDK12Q9NYV4 1490 aaPredicted RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 GLI2P10070 1586 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 CUTAO60888 179 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 CLNS1AP54105 237 aaKnown RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 CEP57L1Q8IYX8 460 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 JPH4Q96JJ6 628 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 ZSCAN31Q96LW9 406 aaPredicted RBP12.7□□□□□ -0.38
ITSN1-207ENST00000399338 VIPAS39Q9H9C1 493 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 PPP2R2CQ9Y2T4 447 aa12.7□□□□□ -0.38
ITSN1-207ENST00000399338 A0A087WWV3 80 aa12.69□□□□□ -0.38
ITSN1-207ENST00000399338 IRAK1P51617 712 aa12.69□□□□□ -0.38
ITSN1-207ENST00000399338 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
ITSN1-207ENST00000399338 KIF9Q9HAQ2 790 aa12.69□□□□□ -0.38
ITSN1-207ENST00000399338 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-207ENST00000399338 MTA1Q13330 715 aa12.69□□□□□ -0.38
ITSN1-207ENST00000399338 CDCA2Q69YH5 1023 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-207ENST00000399338 FAM177A1Q8N128 213 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-207ENST00000399338 KAT14Q9H8E8 782 aa12.69□□□□□ -0.38
ITSN1-207ENST00000399338 DDX20Q9UHI6 824 aaKnown RBP12.69□□□□□ -0.38
ITSN1-207ENST00000399338 TBC1D25Q3MII6 688 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 IGSF22Q8N9C0 903 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 KLC4Q9NSK0 619 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 GOLGA6L9A6NEM1 432 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 VSNL1P62760 191 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 C1QTNF12Q5T7M4 302 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 PARD3BQ8TEW8 1205 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 RILPL2Q969X0 211 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 WDHD1O75717 1129 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-207ENST00000399338 RASSF9O75901 435 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 PECAM1P16284 738 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-207ENST00000399338 GCKP35557 465 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 RBBP5Q15291 538 aaKnown RBP12.68□□□□□ -0.38
ITSN1-207ENST00000399338 TMEM139Q8IV31 216 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-207ENST00000399338 GBP3Q9H0R5 595 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 EFCAB6Q5THR3 1501 aa12.68□□□□□ -0.38
ITSN1-207ENST00000399338 ZC3H4Q9UPT8 1303 aaKnown RBP12.67□□□□□ -0.38
ITSN1-207ENST00000399338 CPA1P15085 419 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 TUBB4BP68371 445 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 CCT2P78371 535 aaKnown RBP12.67□□□□□ -0.38
ITSN1-207ENST00000399338 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 ANKRD23Q86SG2 305 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 NAT10Q9H0A0 1025 aaKnown RBP12.67□□□□□ -0.38
ITSN1-207ENST00000399338 SLC12A5Q9H2X9 1139 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 ZSWIM4Q9H7M6 989 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 SKAP2O75563 359 aaPredicted RBP12.67□□□□□ -0.38
ITSN1-207ENST00000399338 SMTNP53814 917 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 ME3Q16798 604 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 MAB21L3Q8N8X9 362 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 ZNF526Q8TF50 670 aaPredicted RBP12.67□□□□□ -0.38
ITSN1-207ENST00000399338 BPIFA3Q9BQP9 254 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 GRIN2DO15399 1336 aa12.67□□□□□ -0.38
ITSN1-207ENST00000399338 SLC8A3P57103 927 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 NSD2O96028 1365 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 SYCP2Q9BX26 1530 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 FRMD3A2A2Y4 597 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 PDCP20941 246 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 HNRNPMP52272 730 aaKnown RBP eCLIP12.66□□□□□ -0.38
ITSN1-207ENST00000399338 RCSD1Q6JBY9 416 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 DRAXINQ8NBI3 349 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-207ENST00000399338 MAGEC3Q8TD91 643 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 BCAS4Q8TDM0 211 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms