RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 V9GYY5 206 aaPredicted RBP9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 RUFY3Q7L099 469 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 CCDC85AQ96PX6 553 aaPredicted RBP9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 SLC4A4Q9Y6R1 1079 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 IDI1Q13907 227 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 MICU3Q86XE3 530 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 RRP36Q96EU6 259 aaKnown RBP9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 LLPHQ9BRT6 129 aaKnown RBP9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 PAG1Q9NWQ8 432 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 SKILP12757 684 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 DCTPP1Q9H773 170 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 ADGRL2O95490 1459 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 EIF4G3O43432 1585 aaKnown RBP9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 AKR1B10O60218 316 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 ATP5DP30049 168 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 ATP2B3Q16720 1220 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 APBB1IPQ7Z5R6 666 aaPredicted RBP9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 IQCDQ96DY2 449 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 CNPY2Q9Y2B0 182 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 TCERG1LQ5VWI1 586 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 NUP153P49790 1475 aaKnown RBP9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 ELP1O95163 1332 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 SPTLC2O15270 562 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 VWA3BQ502W6 1294 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 KDM5AP29375 1690 aaKnown RBP9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 VAV2P52735 878 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 TRAPPC8Q9Y2L5 1435 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 TRIM75PA6NK02 468 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 LMAN1P49257 510 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 CNGA4Q8IV77 575 aa9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 UTP14AQ9BVJ6 771 aaKnown RBP9.49□□□□□ -0.89
SPTLC3-201ENST00000399002 A0A1W2PRG0 241 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 HOXB7P09629 217 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 SYT1P21579 422 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 UBE3BQ7Z3V4 1068 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 ARFGAP2Q8N6H7 521 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 BRF1Q92994 677 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 BICD1Q96G01 975 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 ATP10BO94823 1461 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 GCC2Q8IWJ2 1684 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 C8orf34Q49A92 452 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 CROCCP2Q86T23 111 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 GLT8D2Q9H1C3 349 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 CHPF2Q9P2E5 772 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 BIN1O00499 593 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 CYP7A1P22680 504 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 GNA11P29992 359 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 NMIQ13287 307 aaPredicted RBP9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 NBPF11Q86T75 865 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 ZCRB1Q8TBF4 217 aaKnown RBP9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 TFIP11Q9UBB9 837 aaKnown RBP9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 IDEP14735 1019 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 ATP2A2P16615 1042 aaKnown RBP9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 UBE4AQ14139 1066 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 NAP1L3Q99457 506 aaPredicted RBP9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 UNC13AQ9UPW8 1703 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 GTF2F1P35269 517 aaKnown RBP eCLIP9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 TNNC1P63316 161 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 TYRO3Q06418 890 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 SPAG5Q96R06 1193 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
SPTLC3-201ENST00000399002 NPHP3Q7Z494 1330 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 KIF5AQ12840 1032 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 CEP85Q6P2H3 762 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 AOPEPQ8N6M6 819 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 GRIPAP1Q4V328 841 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 MSL1Q68DK7 614 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 GIMAP6Q6P9H5 292 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 LINS1Q8NG48 757 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 NEK11Q8NG66 645 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 IQCGQ9H095 443 aaKnown RBP9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 SSX2IPQ9Y2D8 614 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 PRPF4BQ13523 1007 aaKnown RBP9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 NAA16Q6N069 864 aaPredicted RBP9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 HCLS1P14317 486 aaPredicted RBP9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 PPP1R14CQ8TAE6 165 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 DRC1Q96MC2 740 aa9.47□□□□□ -0.89
SPTLC3-201ENST00000399002 ALDH3A1P30838 453 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 RFC4P35249 363 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 NAPAP54920 295 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 PPP2R5BQ15173 497 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 KRT79Q5XKE5 535 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 CCDC94Q9BW85 323 aaPredicted RBP9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 IMPG2Q9BZV3 1241 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 IMPACTQ9P2X3 320 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 MTRF1LQ9UGC7 380 aaKnown RBP9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 EDC4Q6P2E9 1401 aaKnown RBP9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 PCDH11XQ9BZA7 1347 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 PCDH11YQ9BZA8 1340 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 CREB3L3Q68CJ9 461 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 DHX32Q7L7V1 743 aaKnown RBP9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 PLCD1P51178 756 aa9.46□□□□□ -0.89
SPTLC3-201ENST00000399002 ASXL2Q76L83 1435 aa9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 ASIC1P78348 528 aa9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 HDXQ7Z353 690 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms