RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 RPS12P25398 132 aaKnown RBP17.48■□□□□ 0.39
TUBA4A-203ENST00000398989 MAP1SQ66K74 1059 aaPredicted RBP17.48■□□□□ 0.39
TUBA4A-203ENST00000398989 KLHDC4Q8TBB5 520 aa17.48■□□□□ 0.39
TUBA4A-203ENST00000398989 DPF2Q92785 391 aa17.48■□□□□ 0.39
TUBA4A-203ENST00000398989 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
TUBA4A-203ENST00000398989 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
TUBA4A-203ENST00000398989 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
TUBA4A-203ENST00000398989 HTRA3P83110 453 aa17.47■□□□□ 0.39
TUBA4A-203ENST00000398989 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
TUBA4A-203ENST00000398989 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
TUBA4A-203ENST00000398989 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
TUBA4A-203ENST00000398989 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
TUBA4A-203ENST00000398989 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
TUBA4A-203ENST00000398989 GNAI3P08754 354 aa17.46■□□□□ 0.39
TUBA4A-203ENST00000398989 RSBN1LQ6PCB5 846 aaPredicted RBP17.46■□□□□ 0.39
TUBA4A-203ENST00000398989 CNTROBQ8N137 903 aa17.46■□□□□ 0.39
TUBA4A-203ENST00000398989 TRPM4Q8TD43 1214 aa17.46■□□□□ 0.39
TUBA4A-203ENST00000398989 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.38
TUBA4A-203ENST00000398989 ITGBL1O95965 494 aaPredicted RBP17.45■□□□□ 0.38
TUBA4A-203ENST00000398989 RFX5P48382 616 aaPredicted RBP17.45■□□□□ 0.38
TUBA4A-203ENST00000398989 C15orf52Q6ZUT6 534 aaKnown RBP17.45■□□□□ 0.38
TUBA4A-203ENST00000398989 SAMD7Q7Z3H4 446 aa17.45■□□□□ 0.38
TUBA4A-203ENST00000398989 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
TUBA4A-203ENST00000398989 TMEM57Q8N5G2 664 aa17.45■□□□□ 0.38
TUBA4A-203ENST00000398989 PASKQ96RG2 1323 aa17.45■□□□□ 0.38
TUBA4A-203ENST00000398989 HIRAP54198 1017 aaPredicted RBP17.44■□□□□ 0.38
TUBA4A-203ENST00000398989 TBC1D10BQ4KMP7 808 aaPredicted RBP17.44■□□□□ 0.38
TUBA4A-203ENST00000398989 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
TUBA4A-203ENST00000398989 ZNF804AQ7Z570 1209 aa17.44■□□□□ 0.38
TUBA4A-203ENST00000398989 AGBL3Q8NEM8 1001 aa17.44■□□□□ 0.38
TUBA4A-203ENST00000398989 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
TUBA4A-203ENST00000398989 ZNF609O15014 1411 aa17.44■□□□□ 0.38
TUBA4A-203ENST00000398989 EGFRP00533 1210 aa17.43■□□□□ 0.38
TUBA4A-203ENST00000398989 PTPN12Q05209 780 aaKnown RBP17.43■□□□□ 0.38
TUBA4A-203ENST00000398989 UBE4AQ14139 1066 aa17.43■□□□□ 0.38
TUBA4A-203ENST00000398989 DACT2Q5SW24 774 aa17.43■□□□□ 0.38
TUBA4A-203ENST00000398989 RBM26Q5T8P6 1007 aaKnown RBP17.43■□□□□ 0.38
TUBA4A-203ENST00000398989 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
TUBA4A-203ENST00000398989 MXD3Q9BW11 206 aa17.43■□□□□ 0.38
TUBA4A-203ENST00000398989 TRPM7Q96QT4 1865 aa17.42■□□□□ 0.38
TUBA4A-203ENST00000398989 EYA2O00167 538 aa17.42■□□□□ 0.38
TUBA4A-203ENST00000398989 TTLL5Q6EMB2 1281 aa17.42■□□□□ 0.38
TUBA4A-203ENST00000398989 DZIP1LQ8IYY4 767 aaKnown RBP17.42■□□□□ 0.38
TUBA4A-203ENST00000398989 VGLL2Q8N8G2 317 aa17.42■□□□□ 0.38
TUBA4A-203ENST00000398989 GMLQ99445 158 aa17.42■□□□□ 0.38
TUBA4A-203ENST00000398989 SIL1Q9H173 461 aa17.42■□□□□ 0.38
TUBA4A-203ENST00000398989 POLR2AP24928 1970 aaKnown RBP17.42■□□□□ 0.38
TUBA4A-203ENST00000398989 PDE8BO95263 885 aa17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 USP17L8P0C7I0 530 aa17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 RLBP1P12271 317 aa17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 IL1R1P14778 569 aa17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 GTF2IP78347 998 aa17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 KIF4BQ2VIQ3 1234 aa17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 ITPRIPQ8IWB1 547 aa17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 ZC3H15Q8WU90 426 aaKnown RBP17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 MYO3BQ8WXR4 1341 aa17.41■□□□□ 0.38
TUBA4A-203ENST00000398989 GNAI2P04899 355 aa17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 GYG1P46976 350 aa17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 ZNF280AP59817 542 aaPredicted RBP17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 DNAJC5GQ8N7S2 189 aa17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 CREBZFQ9NS37 354 aa17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 PGAP2Q9UHJ9 254 aa17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 PCNTO95613 3336 aa17.4■□□□□ 0.38
TUBA4A-203ENST00000398989 TRAF5O00463 557 aa17.39■□□□□ 0.37
TUBA4A-203ENST00000398989 SRGAP3O43295 1099 aa17.39■□□□□ 0.37
TUBA4A-203ENST00000398989 FMR1Q06787 632 aaKnown RBP eCLIP17.39■□□□□ 0.37
TUBA4A-203ENST00000398989 PUM3Q15397 648 aaKnown RBP17.39■□□□□ 0.37
TUBA4A-203ENST00000398989 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
TUBA4A-203ENST00000398989 TMEM88BA6NKF7 163 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 CIAO1O76071 339 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 HIBADHP31937 336 aaKnown RBP17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 MTX1Q13505 466 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 VPS37DQ86XT2 251 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 FAM84BQ96KN1 310 aaPredicted RBP17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 GLIS2Q9BZE0 524 aaPredicted RBP17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 JAG2Q9Y219 1238 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 MYH13Q9UKX3 1938 aa17.38■□□□□ 0.37
TUBA4A-203ENST00000398989 KIAA0825Q8IV33 1275 aa17.37■□□□□ 0.37
TUBA4A-203ENST00000398989 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
TUBA4A-203ENST00000398989 KLRG1Q96E93 195 aa17.37■□□□□ 0.37
TUBA4A-203ENST00000398989 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
TUBA4A-203ENST00000398989 ARAP2Q8WZ64 1704 aa17.37■□□□□ 0.37
TUBA4A-203ENST00000398989 SASH1O94885 1247 aa17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 IFIT1P09914 478 aaKnown RBP17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 FGFR2P21802 821 aa17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 IL15P40933 162 aaPredicted RBP17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 CAVIN4Q5BKX8 364 aa17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 CDC37L1Q7L3B6 337 aa17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 CERS5Q8N5B7 392 aa17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 TDRD7Q8NHU6 1098 aaKnown RBP17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 DCPSQ96C86 337 aaKnown RBP17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 CEP126Q9P2H0 1117 aa17.36■□□□□ 0.37
TUBA4A-203ENST00000398989 SLC5A1P13866 664 aa17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 SCARF1Q14162 830 aa17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 KRT26Q7Z3Y9 468 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms