RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 LUZP1Q86V48 1076 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZNF594Q96JF6 807 aaPredicted RBP11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 ANO2Q9NQ90 1003 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 GNAI3P08754 354 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZNF75DP51815 510 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 RAD51AP2Q09MP3 1159 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZNF446Q9NWS9 450 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 MRVI1Q9Y6F6 885 aa11.91□□□□□ -0.5
HMGCLL1-205ENST00000398661 SYT1P21579 422 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 FAM196AQ6ZSG2 479 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 SLC51AQ86UW1 340 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 PLA2G4DQ86XP0 818 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 CACTINQ8WUQ7 758 aaKnown RBP11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 UBN2Q6ZU65 1347 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 APBA3O96018 575 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 EIF5P55010 431 aaKnown RBP11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 TYRO3Q06418 890 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 TRIM5Q9C035 493 aa11.9□□□□□ -0.5
HMGCLL1-205ENST00000398661 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 MAP3K11Q16584 847 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 RNF20Q5VTR2 975 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 LMBR1LQ6UX01 489 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 EFCC1Q9HA90 598 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 CACNA1FO60840 1977 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 THSD7AQ9UPZ6 1657 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 MAP4K4O95819 1239 aaPredicted RBP11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 DNM1Q05193 864 aaKnown RBP11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 RGS22Q8NE09 1264 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 CBX8Q9HC52 389 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
HMGCLL1-205ENST00000398661 CHMLP26374 656 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 PTPN14Q15678 1187 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 USPL1Q5W0Q7 1092 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 TEX2Q8IWB9 1127 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 SLU7O95391 586 aaKnown RBP11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 NYAP1Q6ZVC0 841 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 DEFB132Q7Z7B7 95 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 GTF3C6Q969F1 213 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 CLIP2Q9UDT6 1046 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 RAD50Q92878 1312 aa11.88□□□□□ -0.51
HMGCLL1-205ENST00000398661 BTAF1O14981 1849 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 USP27XA6NNY8 438 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 OS9Q13438 667 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 CCDC144BQ3MJ40 725 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 ANO6Q4KMQ2 910 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 CCDC144CPQ8IYA2 1237 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 NUP62CLQ9H1M0 184 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 TRMT112Q9UI30 125 aaKnown RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 NIP7Q9Y221 180 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 TUBGCP6Q96RT7 1819 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 ALDH1L1O75891 902 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 IL6STP40189 918 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 TNNT3P45378 269 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 EN1Q05925 392 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 SUSD4Q5VX71 490 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 ARHGEF1Q92888 912 aaKnown RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 PDGFDQ9GZP0 370 aaPredicted RBP11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 FHOD1Q9Y613 1164 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 NDUFB9Q9Y6M9 179 aa11.87□□□□□ -0.51
HMGCLL1-205ENST00000398661 SNAP23O00161 211 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 CAMTA2O94983 1202 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 H2AFXP16104 143 aaPredicted RBP11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 CASP7P55210 303 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 NLRP10Q86W26 655 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 TDRD7Q8NHU6 1098 aaKnown RBP11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 PUS3Q9BZE2 481 aaKnown RBP11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 HMMRO75330 724 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 CDC25BP30305 580 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 CAMK4Q16566 473 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 LRRC8AQ8IWT6 810 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 RILPL2Q969X0 211 aa11.86□□□□□ -0.51
HMGCLL1-205ENST00000398661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 CHRM1P11229 460 aaPredicted RBP11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 HSPA4P34932 840 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 PLA2G4AP47712 749 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 TEX35Q5T0J7 233 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 RASSF4Q9H2L5 321 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 YY1AP1Q9H869 796 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 TLR7Q9NYK1 1049 aaKnown RBP11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 RSPH14Q9UHP6 348 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 COL15A1P39059 1388 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms