RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 GPBP1L1Q9HC44 474 aaPredicted RBP19.61■□□□□ 0.73
MBD1-207ENST00000398488 FBXO3Q9UK99 471 aa19.61■□□□□ 0.73
MBD1-207ENST00000398488 SASH1O94885 1247 aa19.61■□□□□ 0.73
MBD1-207ENST00000398488 IL15P40933 162 aaPredicted RBP19.61■□□□□ 0.73
MBD1-207ENST00000398488 GYG1P46976 350 aa19.61■□□□□ 0.73
MBD1-207ENST00000398488 TFCP2Q12800 502 aa19.61■□□□□ 0.73
MBD1-207ENST00000398488 DPY19L2Q6NUT2 758 aa19.61■□□□□ 0.73
MBD1-207ENST00000398488 PSMD14O00487 310 aa19.6■□□□□ 0.73
MBD1-207ENST00000398488 KIF3CO14782 793 aa19.6■□□□□ 0.73
MBD1-207ENST00000398488 FAM84BQ96KN1 310 aaPredicted RBP19.6■□□□□ 0.73
MBD1-207ENST00000398488 ZBTB12Q9Y330 459 aaPredicted RBP19.6■□□□□ 0.73
MBD1-207ENST00000398488 WDR90Q96KV7 1748 aa19.6■□□□□ 0.73
MBD1-207ENST00000398488 KDM2BQ8NHM5 1336 aa19.59■□□□□ 0.73
MBD1-207ENST00000398488 CIAPIN1Q6FI81 312 aa19.59■□□□□ 0.73
MBD1-207ENST00000398488 GPC2Q8N158 579 aa19.59■□□□□ 0.73
MBD1-207ENST00000398488 MXD3Q9BW11 206 aa19.59■□□□□ 0.73
MBD1-207ENST00000398488 CD209Q9NNX6 404 aa19.59■□□□□ 0.73
MBD1-207ENST00000398488 CEP126Q9P2H0 1117 aa19.59■□□□□ 0.73
MBD1-207ENST00000398488 SHTN1A0MZ66 631 aa19.58■□□□□ 0.73
MBD1-207ENST00000398488 SURF6O75683 361 aaKnown RBP19.58■□□□□ 0.73
MBD1-207ENST00000398488 RPAP2Q8IXW5 612 aaPredicted RBP19.58■□□□□ 0.73
MBD1-207ENST00000398488 L3MBTL3Q96JM7 780 aaPredicted RBP19.58■□□□□ 0.73
MBD1-207ENST00000398488 COA1Q9GZY4 146 aa19.58■□□□□ 0.73
MBD1-207ENST00000398488 NOP58Q9Y2X3 529 aaKnown RBP19.58■□□□□ 0.73
MBD1-207ENST00000398488 PCDHB15Q9Y5E8 787 aa19.58■□□□□ 0.73
MBD1-207ENST00000398488 ZNF646O15015 1829 aaPredicted RBP19.58■□□□□ 0.72
MBD1-207ENST00000398488 G3V3G9 751 aa19.57■□□□□ 0.72
MBD1-207ENST00000398488 SCNN1DP51172 638 aa19.57■□□□□ 0.72
MBD1-207ENST00000398488 PUM3Q15397 648 aaKnown RBP19.57■□□□□ 0.72
MBD1-207ENST00000398488 DCAF8Q5TAQ9 597 aa19.57■□□□□ 0.72
MBD1-207ENST00000398488 ADORA1P30542 326 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 GMPSP49915 693 aaPredicted RBP19.56■□□□□ 0.72
MBD1-207ENST00000398488 BCAMP50895 628 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 TIMM10P62072 90 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 IRX6P78412 446 aaPredicted RBP19.56■□□□□ 0.72
MBD1-207ENST00000398488 G3BP1Q13283 466 aaKnown RBP eCLIP19.56■□□□□ 0.72
MBD1-207ENST00000398488 PODNQ7Z5L7 613 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 FBXO33Q7Z6M2 555 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 EXOC6Q8TAG9 804 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 EXOC6BQ9Y2D4 811 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 VIL1P09327 827 aaKnown RBP19.56■□□□□ 0.72
MBD1-207ENST00000398488 EPS15P42566 896 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 ATP2B3Q16720 1220 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 JAG2Q9Y219 1238 aa19.56■□□□□ 0.72
MBD1-207ENST00000398488 IL1R1P14778 569 aa19.55■□□□□ 0.72
MBD1-207ENST00000398488 LPIN2Q92539 896 aa19.55■□□□□ 0.72
MBD1-207ENST00000398488 CHMP4BQ9H444 224 aaKnown RBP19.55■□□□□ 0.72
MBD1-207ENST00000398488 IQSEC3Q9UPP2 1182 aaPredicted RBP19.55■□□□□ 0.72
MBD1-207ENST00000398488 PSME4Q14997 1843 aa19.54■□□□□ 0.72
MBD1-207ENST00000398488 POTEIP0CG38 1075 aa19.54■□□□□ 0.72
MBD1-207ENST00000398488 POTEJP0CG39 1038 aa19.54■□□□□ 0.72
MBD1-207ENST00000398488 HIBADHP31937 336 aaKnown RBP19.54■□□□□ 0.72
MBD1-207ENST00000398488 TNIP1Q15025 636 aa19.54■□□□□ 0.72
MBD1-207ENST00000398488 DACT2Q5SW24 774 aa19.54■□□□□ 0.72
MBD1-207ENST00000398488 TDRD7Q8NHU6 1098 aaKnown RBP19.54■□□□□ 0.72
MBD1-207ENST00000398488 USP17L3A6NCW0 530 aa19.53■□□□□ 0.72
MBD1-207ENST00000398488 USP17L4A6NCW7 530 aa19.53■□□□□ 0.72
MBD1-207ENST00000398488 VEGFAP15692 232 aaPredicted RBP19.53■□□□□ 0.72
MBD1-207ENST00000398488 GTF2IP78347 998 aa19.53■□□□□ 0.72
MBD1-207ENST00000398488 USP17L1Q7RTZ2 530 aa19.53■□□□□ 0.72
MBD1-207ENST00000398488 ZNF804AQ7Z570 1209 aa19.53■□□□□ 0.72
MBD1-207ENST00000398488 GMLQ99445 158 aa19.53■□□□□ 0.72
MBD1-207ENST00000398488 A0A1B0GUL7 405 aa19.52■□□□□ 0.72
MBD1-207ENST00000398488 IFIT1P09914 478 aaKnown RBP19.52■□□□□ 0.72
MBD1-207ENST00000398488 SLC5A1P13866 664 aa19.52■□□□□ 0.72
MBD1-207ENST00000398488 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
MBD1-207ENST00000398488 FBXW7Q969H0 707 aa19.52■□□□□ 0.72
MBD1-207ENST00000398488 TAF1DQ9H5J8 278 aaPredicted RBP19.52■□□□□ 0.72
MBD1-207ENST00000398488 GPRC5DQ9NZD1 345 aa19.52■□□□□ 0.72
MBD1-207ENST00000398488 OS9Q13438 667 aaPredicted RBP19.51■□□□□ 0.71
MBD1-207ENST00000398488 TTLL5Q6EMB2 1281 aa19.51■□□□□ 0.71
MBD1-207ENST00000398488 RSBN1LQ6PCB5 846 aaPredicted RBP19.51■□□□□ 0.71
MBD1-207ENST00000398488 ZNF609O15014 1411 aa19.51■□□□□ 0.71
MBD1-207ENST00000398488 APBB1O00213 710 aa19.51■□□□□ 0.71
MBD1-207ENST00000398488 EGFRP00533 1210 aa19.51■□□□□ 0.71
MBD1-207ENST00000398488 PHKA1P46020 1223 aa19.51■□□□□ 0.71
MBD1-207ENST00000398488 STRIP1Q5VSL9 837 aa19.51■□□□□ 0.71
MBD1-207ENST00000398488 XAGE2Q96GT9 111 aa19.51■□□□□ 0.71
MBD1-207ENST00000398488 HACL1Q9UJ83 578 aa19.51■□□□□ 0.71
MBD1-207ENST00000398488 COL1A1P02452 1464 aaPredicted RBP19.5■□□□□ 0.71
MBD1-207ENST00000398488 SCN4AP35499 1836 aa19.5■□□□□ 0.71
MBD1-207ENST00000398488 EPHX2P34913 555 aa19.5■□□□□ 0.71
MBD1-207ENST00000398488 TNNI3KQ59H18 835 aa19.5■□□□□ 0.71
MBD1-207ENST00000398488 CNOT7Q9UIV1 285 aaKnown RBP19.5■□□□□ 0.71
MBD1-207ENST00000398488 FPGT-TNNI3KV9GXZ4 949 aa19.5■□□□□ 0.71
MBD1-207ENST00000398488 ARAP2Q8WZ64 1704 aa19.5■□□□□ 0.71
MBD1-207ENST00000398488 HMMRO75330 724 aa19.49■□□□□ 0.71
MBD1-207ENST00000398488 HIRAP54198 1017 aaPredicted RBP19.49■□□□□ 0.71
MBD1-207ENST00000398488 GRIK5Q16478 980 aa19.49■□□□□ 0.71
MBD1-207ENST00000398488 CAVIN4Q5BKX8 364 aa19.49■□□□□ 0.71
MBD1-207ENST00000398488 MICALL2Q8IY33 904 aa19.49■□□□□ 0.71
MBD1-207ENST00000398488 EAF2Q96CJ1 260 aaPredicted RBP19.49■□□□□ 0.71
MBD1-207ENST00000398488 NEUROD6Q96NK8 337 aa19.49■□□□□ 0.71
MBD1-207ENST00000398488 TLR7Q9NYK1 1049 aaKnown RBP19.49■□□□□ 0.71
MBD1-207ENST00000398488 CCDC102BQ68D86 513 aa19.48■□□□□ 0.71
MBD1-207ENST00000398488 TRPM4Q8TD43 1214 aa19.48■□□□□ 0.71
MBD1-207ENST00000398488 DPF2Q92785 391 aa19.48■□□□□ 0.71
MBD1-207ENST00000398488 DBNDD2Q9BQY9 259 aa19.48■□□□□ 0.71
MBD1-207ENST00000398488 IL1RAPL2Q9NP60 686 aa19.48■□□□□ 0.71
MBD1-207ENST00000398488 AKAP2Q9Y2D5 859 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms