RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MYO19Q96H55 970 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 HINFPQ9BQA5 517 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 MUC3BQ9H195 1237 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 RASSF4Q9H2L5 321 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 CARMIL2Q6F5E8 1435 aa5.58□□□□□ -1.52
CD47-203ENST00000398258 FOSL1P15407 271 aa5.58□□□□□ -1.52
CD47-203ENST00000398258 CEP135Q66GS9 1140 aa5.58□□□□□ -1.52
CD47-203ENST00000398258 FBXL6Q8N531 539 aa5.58□□□□□ -1.52
CD47-203ENST00000398258 ANGEL1Q9UNK9 670 aaKnown RBP5.58□□□□□ -1.52
CD47-203ENST00000398258 CDC27P30260 824 aa5.57□□□□□ -1.52
CD47-203ENST00000398258 HDGFL1Q5TGJ6 251 aa5.57□□□□□ -1.52
CD47-203ENST00000398258 HGSNATQ68CP4 663 aa5.57□□□□□ -1.52
CD47-203ENST00000398258 LILRA6Q6PI73 481 aa5.57□□□□□ -1.52
CD47-203ENST00000398258 WFDC3Q8IUB2 231 aa5.57□□□□□ -1.52
CD47-203ENST00000398258 PAK6Q9NQU5 681 aaPredicted RBP5.57□□□□□ -1.52
CD47-203ENST00000398258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.57□□□□□ -1.52
CD47-203ENST00000398258 JUNBP17275 347 aaPredicted RBP5.56□□□□□ -1.52
CD47-203ENST00000398258 MAP4P27816 1152 aaKnown RBP5.56□□□□□ -1.52
CD47-203ENST00000398258 ADMP35318 185 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 DPYDQ12882 1025 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 PTK7Q13308 1070 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 VSIG10LQ86VR7 867 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 TP53INP2Q8IXH6 220 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 OR13H1Q8NG92 308 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 ZMYND15Q9H091 742 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 RBSNQ9H1K0 784 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 LEMD3Q9Y2U8 911 aa5.56□□□□□ -1.52
CD47-203ENST00000398258 CYP2E1P05181 493 aaPredicted RBP5.55□□□□□ -1.52
CD47-203ENST00000398258 WEE1P30291 646 aa5.55□□□□□ -1.52
CD47-203ENST00000398258 FLIIQ13045 1269 aa5.55□□□□□ -1.52
CD47-203ENST00000398258 NLRP13Q86W25 1043 aa5.55□□□□□ -1.52
CD47-203ENST00000398258 ETFBKMTQ8IXQ9 262 aa5.55□□□□□ -1.52
CD47-203ENST00000398258 CACTIN-AS1Q8N1I8 211 aa5.55□□□□□ -1.52
CD47-203ENST00000398258 KLHL23Q8NBE8 558 aa5.55□□□□□ -1.52
CD47-203ENST00000398258 SART1O43290 800 aaKnown RBP5.54□□□□□ -1.52
CD47-203ENST00000398258 NLRP12P59046 1061 aa5.54□□□□□ -1.52
CD47-203ENST00000398258 COX20Q5RI15 118 aa5.54□□□□□ -1.52
CD47-203ENST00000398258 ANKRD34AQ69YU3 496 aa5.54□□□□□ -1.52
CD47-203ENST00000398258 FBXL18Q96ME1 805 aa5.54□□□□□ -1.52
CD47-203ENST00000398258 POP1Q99575 1024 aaKnown RBP5.54□□□□□ -1.52
CD47-203ENST00000398258 RBM19Q9Y4C8 960 aaKnown RBP5.54□□□□□ -1.52
CD47-203ENST00000398258 GATA6Q92908 595 aa5.53□□□□□ -1.52
CD47-203ENST00000398258 ARXQ96QS3 562 aa5.53□□□□□ -1.52
CD47-203ENST00000398258 SEC31BQ9NQW1 1179 aa5.53□□□□□ -1.52
CD47-203ENST00000398258 HIF3AQ9Y2N7 669 aa5.53□□□□□ -1.52
CD47-203ENST00000398258 MAFBQ9Y5Q3 323 aaPredicted RBP5.53□□□□□ -1.52
CD47-203ENST00000398258 KIF4AO95239 1232 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 DLGAP3O95886 979 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 ACPPP15309 386 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 KANK4Q5T7N3 995 aaPredicted RBP5.52□□□□□ -1.53
CD47-203ENST00000398258 CILP2Q8IUL8 1156 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 OSBPL1AQ9BXW6 950 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 PBX4Q9BYU1 374 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 ADAM19Q9H013 955 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 RNF208Q9H0X6 261 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 ATG3Q9NT62 314 aa5.52□□□□□ -1.53
CD47-203ENST00000398258 TFIP11Q9UBB9 837 aaKnown RBP5.52□□□□□ -1.53
CD47-203ENST00000398258 FAM170BA6NMN3 283 aa5.51□□□□□ -1.53
CD47-203ENST00000398258 FOXO3O43524 673 aa5.51□□□□□ -1.53
CD47-203ENST00000398258 CDPF1Q6NVV7 123 aa5.51□□□□□ -1.53
CD47-203ENST00000398258 ZNF574Q6ZN55 896 aaPredicted RBP5.51□□□□□ -1.53
CD47-203ENST00000398258 CEP120Q8N960 986 aa5.51□□□□□ -1.53
CD47-203ENST00000398258 FLCNQ8NFG4 579 aa5.51□□□□□ -1.53
CD47-203ENST00000398258 RUSC1Q9BVN2 902 aa5.51□□□□□ -1.53
CD47-203ENST00000398258 SAP130Q9H0E3 1048 aa5.51□□□□□ -1.53
CD47-203ENST00000398258 SMNDC1O75940 238 aaKnown RBP eCLIP5.5□□□□□ -1.53
CD47-203ENST00000398258 TIAF1O95411 115 aa5.5□□□□□ -1.53
CD47-203ENST00000398258 HYAL2Q12891 473 aa5.5□□□□□ -1.53
CD47-203ENST00000398258 ANKMY2Q8IV38 441 aa5.5□□□□□ -1.53
CD47-203ENST00000398258 BSDC1Q9NW68 430 aaPredicted RBP5.5□□□□□ -1.53
CD47-203ENST00000398258 A6NJR5 290 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L15C9J2P7 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L10C9JJH3 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L13C9JLJ4 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L12C9JPN9 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L11C9JVI0 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L21D6R901 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L18D6R9N7 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L22D6RA61 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L17D6RBQ6 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L19D6RCP7 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L20D6RJB6 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 H3BRJ5 948 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 NFKBIEO00221 500 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 GAS2O43903 313 aaKnown RBP5.49□□□□□ -1.53
CD47-203ENST00000398258 USP17L24Q0WX57 530 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 FDX2Q6P4F2 183 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 FBLIM1Q8WUP2 373 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 HHIPQ96QV1 700 aa5.49□□□□□ -1.53
CD47-203ENST00000398258 ZC3H7BQ9UGR2 993 aaKnown RBP5.49□□□□□ -1.53
CD47-203ENST00000398258 MEGF11A6BM72 1044 aa5.48□□□□□ -1.53
CD47-203ENST00000398258 UBAP1LF5GYI3 381 aa5.48□□□□□ -1.53
CD47-203ENST00000398258 CYP26A1O43174 497 aa5.48□□□□□ -1.53
CD47-203ENST00000398258 TRPA1O75762 1119 aa5.48□□□□□ -1.53
CD47-203ENST00000398258 DRD2P14416 443 aa5.48□□□□□ -1.53
CD47-203ENST00000398258 FKBP5Q13451 457 aaPredicted RBP5.48□□□□□ -1.53
CD47-203ENST00000398258 SPRED2Q7Z698 418 aa5.48□□□□□ -1.53
CD47-203ENST00000398258 TMPRSS13Q9BYE2 586 aa5.48□□□□□ -1.53
CD47-203ENST00000398258 PRKAG2Q9UGJ0 569 aa5.48□□□□□ -1.53
CD47-203ENST00000398258 FAM95CA0A1B0GW59 222 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms