RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SLC51AQ86UW1 340 aa23.37■■□□□ 1.33
PDLIM2-204ENST00000397760 MTFR1LQ9H019 292 aa23.37■■□□□ 1.33
PDLIM2-204ENST00000397760 ANKIB1Q9P2G1 1089 aa23.37■■□□□ 1.33
PDLIM2-204ENST00000397760 PPEF1O14829 653 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 UQCRFS1P1P0C7P4 283 aa23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 TMC4Q7Z404 712 aa23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 ZNF622Q969S3 477 aaKnown RBP eCLIP23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 ATF5Q9Y2D1 282 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 BCAMP50895 628 aa23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 SCARF1Q14162 830 aa23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 FSD1Q9BTV5 496 aa23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 SNRKQ9NRH2 765 aa23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 PAG1Q9NWQ8 432 aa23.36■■□□□ 1.33
PDLIM2-204ENST00000397760 GOLIM4O00461 696 aa23.35■■□□□ 1.33
PDLIM2-204ENST00000397760 ARID4AP29374 1257 aaPredicted RBP23.35■■□□□ 1.33
PDLIM2-204ENST00000397760 FKBP4Q02790 459 aaKnown RBP eCLIP23.35■■□□□ 1.33
PDLIM2-204ENST00000397760 SNX21Q969T3 373 aa23.35■■□□□ 1.33
PDLIM2-204ENST00000397760 ZNF804BA4D1E1 1349 aa23.35■■□□□ 1.33
PDLIM2-204ENST00000397760 XDHP47989 1333 aa23.35■■□□□ 1.33
PDLIM2-204ENST00000397760 MCAMP43121 646 aa23.34■■□□□ 1.33
PDLIM2-204ENST00000397760 STYK1Q6J9G0 422 aa23.34■■□□□ 1.33
PDLIM2-204ENST00000397760 SLKQ9H2G2 1235 aaPredicted RBP23.34■■□□□ 1.33
PDLIM2-204ENST00000397760 LEMD3Q9Y2U8 911 aa23.34■■□□□ 1.33
PDLIM2-204ENST00000397760 CHRNA5P30532 468 aa23.33■■□□□ 1.33
PDLIM2-204ENST00000397760 GPSM2P81274 684 aa23.33■■□□□ 1.33
PDLIM2-204ENST00000397760 SP8Q8IXZ3 490 aa23.33■■□□□ 1.33
PDLIM2-204ENST00000397760 NSFL1CQ9UNZ2 370 aaKnown RBP23.33■■□□□ 1.33
PDLIM2-204ENST00000397760 PSDA5PKW4 1024 aaPredicted RBP23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 POLD1P28340 1107 aa23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 ZAP70P43403 619 aa23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 GYG1P46976 350 aa23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 CAVIN4Q5BKX8 364 aa23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 ESYT1Q9BSJ8 1104 aa23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 DIAPH3Q9NSV4 1193 aa23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 CHMP5Q9NZZ3 219 aa23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 ATP6V0A2Q9Y487 856 aa23.33■■□□□ 1.32
PDLIM2-204ENST00000397760 C10orf71Q711Q0 1435 aa23.32■■□□□ 1.32
PDLIM2-204ENST00000397760 HIP1O00291 1037 aa23.32■■□□□ 1.32
PDLIM2-204ENST00000397760 PI16Q6UXB8 463 aa23.32■■□□□ 1.32
PDLIM2-204ENST00000397760 ILDR2Q71H61 639 aa23.32■■□□□ 1.32
PDLIM2-204ENST00000397760 KBTBD3Q8NAB2 608 aa23.32■■□□□ 1.32
PDLIM2-204ENST00000397760 HSCBQ8IWL3 235 aa23.31■■□□□ 1.32
PDLIM2-204ENST00000397760 FAM84BQ96KN1 310 aaPredicted RBP23.31■■□□□ 1.32
PDLIM2-204ENST00000397760 ARAP2Q8WZ64 1704 aa23.31■■□□□ 1.32
PDLIM2-204ENST00000397760 ATP2B4P23634 1241 aa23.31■■□□□ 1.32
PDLIM2-204ENST00000397760 KLRK1P26718 216 aa23.31■■□□□ 1.32
PDLIM2-204ENST00000397760 VPS37DQ86XT2 251 aa23.31■■□□□ 1.32
PDLIM2-204ENST00000397760 PODXL2Q9NZ53 605 aa23.31■■□□□ 1.32
PDLIM2-204ENST00000397760 A0A1B0GUL6 1792 aa23.3■■□□□ 1.32
PDLIM2-204ENST00000397760 CWC27Q6UX04 472 aaKnown RBP23.3■■□□□ 1.32
PDLIM2-204ENST00000397760 CNKSR1Q969H4 720 aa23.3■■□□□ 1.32
PDLIM2-204ENST00000397760 GNL3LQ9NVN8 582 aaKnown RBP23.3■■□□□ 1.32
PDLIM2-204ENST00000397760 HMG20BQ9P0W2 317 aa23.3■■□□□ 1.32
PDLIM2-204ENST00000397760 GGA1Q9UJY5 639 aa23.3■■□□□ 1.32
PDLIM2-204ENST00000397760 COL11A2P13942 1736 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-204ENST00000397760 RASGRF1Q13972 1273 aa23.29■■□□□ 1.32
PDLIM2-204ENST00000397760 FBXO33Q7Z6M2 555 aa23.29■■□□□ 1.32
PDLIM2-204ENST00000397760 UFL1O94874 794 aa23.29■■□□□ 1.32
PDLIM2-204ENST00000397760 SPATA5Q8NB90 893 aa23.29■■□□□ 1.32
PDLIM2-204ENST00000397760 RUFY2Q8WXA3 655 aa23.29■■□□□ 1.32
PDLIM2-204ENST00000397760 TMX4Q9H1E5 349 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-204ENST00000397760 REC8O95072 547 aa23.28■■□□□ 1.32
PDLIM2-204ENST00000397760 HIBADHP31937 336 aaKnown RBP23.28■■□□□ 1.32
PDLIM2-204ENST00000397760 RFX7Q2KHR2 1363 aa23.28■■□□□ 1.32
PDLIM2-204ENST00000397760 IRS2Q9Y4H2 1338 aa23.27■■□□□ 1.32
PDLIM2-204ENST00000397760 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
PDLIM2-204ENST00000397760 PRPF40BQ6NWY9 871 aaKnown RBP23.27■■□□□ 1.32
PDLIM2-204ENST00000397760 TXNRD3Q86VQ6 643 aa23.27■■□□□ 1.32
PDLIM2-204ENST00000397760 TICAM2Q86XR7 235 aa23.27■■□□□ 1.32
PDLIM2-204ENST00000397760 SGSM2O43147 1006 aa23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 NMIQ13287 307 aaPredicted RBP23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 TTF1Q15361 905 aaPredicted RBP23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 OLFM4Q6UX06 510 aa23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 FAM227BQ96M60 508 aa23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 IL25Q9H293 177 aa23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 IQSEC3Q9UPP2 1182 aaPredicted RBP23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 AK9Q5TCS8 1911 aa23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 C15orf52Q6ZUT6 534 aaKnown RBP23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 TBC1D16Q8TBP0 767 aa23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 POLLQ9UGP5 575 aa23.26■■□□□ 1.31
PDLIM2-204ENST00000397760 MPNDQ8N594 471 aa23.25■■□□□ 1.31
PDLIM2-204ENST00000397760 GPR101Q96P66 508 aaPredicted RBP23.25■■□□□ 1.31
PDLIM2-204ENST00000397760 A0A0G2JLW4 131 aa23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 C6orf229H3BNL8 230 aa23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 USP26Q9BXU7 913 aa23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 PIH1D3Q9NQM4 214 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 CIZ1Q9ULV3 898 aaPredicted RBP23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 DPEP1P16444 411 aa23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 LRRFIP1Q32MZ4 808 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 SGIP1Q9BQI5 828 aa23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 ANO2Q9NQ90 1003 aa23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 DENND2AQ9ULE3 1009 aa23.24■■□□□ 1.31
PDLIM2-204ENST00000397760 A0A0D9SFI3 127 aa23.23■■□□□ 1.31
PDLIM2-204ENST00000397760 SEMA3EO15041 775 aa23.23■■□□□ 1.31
PDLIM2-204ENST00000397760 CHGBP05060 677 aa23.23■■□□□ 1.31
PDLIM2-204ENST00000397760 DPP8Q6V1X1 898 aaPredicted RBP23.23■■□□□ 1.31
PDLIM2-204ENST00000397760 RNF113AO15541 343 aaKnown RBP23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 ZNF219Q9P2Y4 722 aaPredicted RBP23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 LRRC37AA6NMS7 1700 aa23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 KCNA3P22001 575 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms