RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MYH3P11055 1940 aa20.81■□□□□ 0.92
CUX2-202ENST00000397643 WNT10BO00744 389 aa20.81■□□□□ 0.92
CUX2-202ENST00000397643 TM4SF4P48230 202 aa20.81■□□□□ 0.92
CUX2-202ENST00000397643 PKN2Q16513 984 aaKnown RBP20.81■□□□□ 0.92
CUX2-202ENST00000397643 MINPP1Q9UNW1 487 aa20.81■□□□□ 0.92
CUX2-202ENST00000397643 IGKV5-2P06315 115 aa20.8■□□□□ 0.92
CUX2-202ENST00000397643 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
CUX2-202ENST00000397643 C8orf58Q8NAV2 365 aa20.8■□□□□ 0.92
CUX2-202ENST00000397643 CDC5LQ99459 802 aaKnown RBP20.8■□□□□ 0.92
CUX2-202ENST00000397643 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
CUX2-202ENST00000397643 TTLL11Q8NHH1 800 aa20.79■□□□□ 0.92
CUX2-202ENST00000397643 GREM2Q9H772 168 aa20.79■□□□□ 0.92
CUX2-202ENST00000397643 BSDC1Q9NW68 430 aaPredicted RBP20.79■□□□□ 0.92
CUX2-202ENST00000397643 HDAC9Q9UKV0 1011 aa20.79■□□□□ 0.92
CUX2-202ENST00000397643 HTTP42858 3142 aa20.78■□□□□ 0.92
CUX2-202ENST00000397643 GPR25O00155 361 aa20.78■□□□□ 0.92
CUX2-202ENST00000397643 GNAI1P63096 354 aa20.78■□□□□ 0.92
CUX2-202ENST00000397643 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
CUX2-202ENST00000397643 TXNRD3Q86VQ6 643 aa20.78■□□□□ 0.92
CUX2-202ENST00000397643 CFHR5Q9BXR6 569 aa20.78■□□□□ 0.92
CUX2-202ENST00000397643 MAP3K2Q9Y2U5 619 aa20.78■□□□□ 0.92
CUX2-202ENST00000397643 MYO3BQ8WXR4 1341 aa20.78■□□□□ 0.92
CUX2-202ENST00000397643 SASH1O94885 1247 aa20.77■□□□□ 0.92
CUX2-202ENST00000397643 CCT4P50991 539 aaKnown RBP20.77■□□□□ 0.92
CUX2-202ENST00000397643 R3HDMLQ9H3Y0 253 aa20.77■□□□□ 0.92
CUX2-202ENST00000397643 APAF1O14727 1248 aa20.76■□□□□ 0.91
CUX2-202ENST00000397643 DDX58O95786 925 aaKnown RBP20.76■□□□□ 0.91
CUX2-202ENST00000397643 MKRN3Q13064 507 aaKnown RBP20.76■□□□□ 0.91
CUX2-202ENST00000397643 TTLL12Q14166 644 aaPredicted RBP20.76■□□□□ 0.91
CUX2-202ENST00000397643 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
CUX2-202ENST00000397643 COA1Q9GZY4 146 aa20.76■□□□□ 0.91
CUX2-202ENST00000397643 KLRK1P26718 216 aa20.75■□□□□ 0.91
CUX2-202ENST00000397643 PTPN12Q05209 780 aaKnown RBP20.75■□□□□ 0.91
CUX2-202ENST00000397643 FBXO46Q6PJ61 603 aaPredicted RBP20.75■□□□□ 0.91
CUX2-202ENST00000397643 KSR2Q6VAB6 950 aa20.75■□□□□ 0.91
CUX2-202ENST00000397643 TSPYL6Q8N831 410 aa20.75■□□□□ 0.91
CUX2-202ENST00000397643 ZBED3Q96IU2 234 aaPredicted RBP20.75■□□□□ 0.91
CUX2-202ENST00000397643 PI4KAP2A4QPH2 592 aa20.74■□□□□ 0.91
CUX2-202ENST00000397643 NF2P35240 595 aa20.74■□□□□ 0.91
CUX2-202ENST00000397643 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
CUX2-202ENST00000397643 PI4KAP1Q8N8J0 262 aa20.74■□□□□ 0.91
CUX2-202ENST00000397643 CALD1Q05682 793 aaKnown RBP20.73■□□□□ 0.91
CUX2-202ENST00000397643 SREBF2Q12772 1141 aa20.73■□□□□ 0.91
CUX2-202ENST00000397643 CWF19L2Q2TBE0 894 aaKnown RBP20.73■□□□□ 0.91
CUX2-202ENST00000397643 LDLRAD1Q5T700 205 aa20.73■□□□□ 0.91
CUX2-202ENST00000397643 FBXW7Q969H0 707 aa20.73■□□□□ 0.91
CUX2-202ENST00000397643 LEMD3Q9Y2U8 911 aa20.73■□□□□ 0.91
CUX2-202ENST00000397643 LAMB1P07942 1786 aa20.72■□□□□ 0.91
CUX2-202ENST00000397643 NEURL1BA8MQ27 555 aa20.72■□□□□ 0.91
CUX2-202ENST00000397643 MMP14P50281 582 aa20.72■□□□□ 0.91
CUX2-202ENST00000397643 SPRYD7Q5W111 196 aa20.72■□□□□ 0.91
CUX2-202ENST00000397643 APOBEC3FQ8IUX4 373 aaKnown RBP20.72■□□□□ 0.91
CUX2-202ENST00000397643 MKI67P46013 3256 aaKnown RBP20.72■□□□□ 0.91
CUX2-202ENST00000397643 SSC5DA1L4H1 1573 aa20.72■□□□□ 0.91
CUX2-202ENST00000397643 COL1A1P02452 1464 aaPredicted RBP20.71■□□□□ 0.91
CUX2-202ENST00000397643 FKTNO75072 461 aa20.71■□□□□ 0.91
CUX2-202ENST00000397643 PRKG1Q13976 671 aa20.71■□□□□ 0.91
CUX2-202ENST00000397643 KIAA0825Q8IV33 1275 aa20.71■□□□□ 0.91
CUX2-202ENST00000397643 FZD1Q9UP38 647 aa20.71■□□□□ 0.91
CUX2-202ENST00000397643 ZNF804BA4D1E1 1349 aa20.71■□□□□ 0.91
CUX2-202ENST00000397643 H7C1W4 665 aa20.7■□□□□ 0.9
CUX2-202ENST00000397643 TTLL5Q6EMB2 1281 aa20.7■□□□□ 0.9
CUX2-202ENST00000397643 ARMC9Q7Z3E5 817 aa20.7■□□□□ 0.9
CUX2-202ENST00000397643 IRS2Q9Y4H2 1338 aa20.7■□□□□ 0.9
CUX2-202ENST00000397643 UBE3BQ7Z3V4 1068 aa20.69■□□□□ 0.9
CUX2-202ENST00000397643 PLA2G12BQ9BX93 195 aa20.69■□□□□ 0.9
CUX2-202ENST00000397643 ANGEL1Q9UNK9 670 aaKnown RBP20.69■□□□□ 0.9
CUX2-202ENST00000397643 ITGA6P23229 1130 aa20.68■□□□□ 0.9
CUX2-202ENST00000397643 IGHMBP2P38935 993 aaKnown RBP20.68■□□□□ 0.9
CUX2-202ENST00000397643 CASP7P55210 303 aa20.68■□□□□ 0.9
CUX2-202ENST00000397643 GTF2IP78347 998 aa20.68■□□□□ 0.9
CUX2-202ENST00000397643 MAP3K11Q16584 847 aa20.68■□□□□ 0.9
CUX2-202ENST00000397643 G2E3Q7L622 706 aa20.68■□□□□ 0.9
CUX2-202ENST00000397643 CHMP4AQ9BY43 222 aa20.68■□□□□ 0.9
CUX2-202ENST00000397643 PRKRIP1Q9H875 184 aaPredicted RBP20.68■□□□□ 0.9
CUX2-202ENST00000397643 CENPFP49454 3210 aa20.67■□□□□ 0.9
CUX2-202ENST00000397643 NEXNQ0ZGT2 675 aa20.67■□□□□ 0.9
CUX2-202ENST00000397643 CERS5Q8N5B7 392 aa20.67■□□□□ 0.9
CUX2-202ENST00000397643 ANKRD2Q9GZV1 360 aa20.67■□□□□ 0.9
CUX2-202ENST00000397643 DEFB129Q9H1M3 183 aa20.67■□□□□ 0.9
CUX2-202ENST00000397643 BRCA2P51587 3418 aa20.67■□□□□ 0.9
CUX2-202ENST00000397643 A0A1B0GUL6 1792 aa20.67■□□□□ 0.9
CUX2-202ENST00000397643 ECM29Q5VYK3 1845 aa20.67■□□□□ 0.9
CUX2-202ENST00000397643 CSF1RP07333 972 aa20.66■□□□□ 0.9
CUX2-202ENST00000397643 TSR2Q969E8 191 aaKnown RBP20.66■□□□□ 0.9
CUX2-202ENST00000397643 PCDHAC2Q9Y5I4 1007 aa20.66■□□□□ 0.9
CUX2-202ENST00000397643 MANSC4A6NHS7 340 aaPredicted RBP20.65■□□□□ 0.9
CUX2-202ENST00000397643 IGF2BP3O00425 579 aaKnown RBP eCLIP20.65■□□□□ 0.9
CUX2-202ENST00000397643 ALDH1A1P00352 501 aa20.65■□□□□ 0.9
CUX2-202ENST00000397643 GCKRQ14397 625 aa20.65■□□□□ 0.9
CUX2-202ENST00000397643 IFNL1Q8IU54 200 aa20.65■□□□□ 0.9
CUX2-202ENST00000397643 MTMR14Q8NCE2 650 aa20.65■□□□□ 0.9
CUX2-202ENST00000397643 CLMNQ96JQ2 1002 aa20.65■□□□□ 0.9
CUX2-202ENST00000397643 CD209Q9NNX6 404 aa20.65■□□□□ 0.9
CUX2-202ENST00000397643 SNAP23O00161 211 aa20.64■□□□□ 0.89
CUX2-202ENST00000397643 ZBTB48P10074 688 aaPredicted RBP20.64■□□□□ 0.89
CUX2-202ENST00000397643 CHRNDQ07001 517 aa20.64■□□□□ 0.89
CUX2-202ENST00000397643 OTOP1Q7RTM1 612 aa20.64■□□□□ 0.89
CUX2-202ENST00000397643 WNK4Q96J92 1243 aa20.64■□□□□ 0.89
CUX2-202ENST00000397643 STK31Q9BXU1 1019 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms