RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 DIAPH3Q9NSV4 1193 aa23.05■■□□□ 1.28
TSPAN4-204ENST00000397404 RBM19Q9Y4C8 960 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-204ENST00000397404 LRRC37AA6NMS7 1700 aa23.04■■□□□ 1.28
TSPAN4-204ENST00000397404 TAF5LO75529 589 aa23.04■■□□□ 1.28
TSPAN4-204ENST00000397404 ZFYP08048 801 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-204ENST00000397404 ATP2B4P23634 1241 aa23.04■■□□□ 1.28
TSPAN4-204ENST00000397404 CC2D2BQ6DHV5 1058 aa23.04■■□□□ 1.28
TSPAN4-204ENST00000397404 ANKIB1Q9P2G1 1089 aa23.04■■□□□ 1.28
TSPAN4-204ENST00000397404 ZNF804BA4D1E1 1349 aa23.03■■□□□ 1.28
TSPAN4-204ENST00000397404 PPEF1O14829 653 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-204ENST00000397404 ADORA1P30542 326 aa23.03■■□□□ 1.28
TSPAN4-204ENST00000397404 ZSCAN25Q6NSZ9 544 aa23.03■■□□□ 1.28
TSPAN4-204ENST00000397404 HELBQ8NG08 1087 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-204ENST00000397404 FSD1Q9BTV5 496 aa23.03■■□□□ 1.28
TSPAN4-204ENST00000397404 ATP6V0A2Q9Y487 856 aa23.03■■□□□ 1.28
TSPAN4-204ENST00000397404 VPS37DQ86XT2 251 aa23.02■■□□□ 1.28
TSPAN4-204ENST00000397404 ESYT1Q9BSJ8 1104 aa23.02■■□□□ 1.28
TSPAN4-204ENST00000397404 TAF1P21675 1872 aa23.01■■□□□ 1.27
TSPAN4-204ENST00000397404 C2CD5Q86YS7 1000 aa23.01■■□□□ 1.27
TSPAN4-204ENST00000397404 DNAJC2Q99543 621 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-204ENST00000397404 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.01■■□□□ 1.27
TSPAN4-204ENST00000397404 GGA1Q9UJY5 639 aa23■■□□□ 1.27
TSPAN4-204ENST00000397404 DENND2AQ9ULE3 1009 aa23■■□□□ 1.27
TSPAN4-204ENST00000397404 COL4A1P02462 1669 aa23■■□□□ 1.27
TSPAN4-204ENST00000397404 MFAP1P55081 439 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-204ENST00000397404 TBC1D32Q96NH3 1257 aa22.99■■□□□ 1.27
TSPAN4-204ENST00000397404 SNRKQ9NRH2 765 aa22.99■■□□□ 1.27
TSPAN4-204ENST00000397404 KIF13BQ9NQT8 1826 aa22.99■■□□□ 1.27
TSPAN4-204ENST00000397404 ANP32AP39687 249 aaKnown RBP22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 TGFB2P61812 414 aa22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 FBXO33Q7Z6M2 555 aa22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 GOLIM4O00461 696 aa22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 SGSM2O43147 1006 aa22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 MAP4K4O95819 1239 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 MCAMP43121 646 aa22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 PHKA1P46020 1223 aa22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 RBM25P49756 843 aaKnown RBP22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 FKBP4Q02790 459 aaKnown RBP eCLIP22.98■■□□□ 1.272e-6■■■■■ 27.3
TSPAN4-204ENST00000397404 SPATA5Q8NB90 893 aa22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 C22orf23Q9BZE7 217 aa22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 COL11A2P13942 1736 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-204ENST00000397404 AKAP11Q9UKA4 1901 aa22.97■■□□□ 1.27
TSPAN4-204ENST00000397404 DLEC1Q9Y238 1755 aa22.97■■□□□ 1.27
TSPAN4-204ENST00000397404 HIBADHP31937 336 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-204ENST00000397404 KIAA1211Q6ZU35 1233 aa22.97■■□□□ 1.27
TSPAN4-204ENST00000397404 ZNF804AQ7Z570 1209 aa22.97■■□□□ 1.27
TSPAN4-204ENST00000397404 FAM84BQ96KN1 310 aaPredicted RBP22.97■■□□□ 1.27
TSPAN4-204ENST00000397404 HELLSQ9NRZ9 838 aa22.97■■□□□ 1.27
TSPAN4-204ENST00000397404 MED23Q9ULK4 1368 aa22.96■■□□□ 1.27
TSPAN4-204ENST00000397404 SEC24BO95487 1268 aa22.96■■□□□ 1.27
TSPAN4-204ENST00000397404 MCCP23508 829 aa22.96■■□□□ 1.27
TSPAN4-204ENST00000397404 ZNF622Q969S3 477 aaKnown RBP eCLIP22.96■■□□□ 1.27
TSPAN4-204ENST00000397404 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-204ENST00000397404 DUOX1Q9NRD9 1551 aa22.95■■□□□ 1.26
TSPAN4-204ENST00000397404 SOGA3Q5TF21 947 aa22.95■■□□□ 1.26
TSPAN4-204ENST00000397404 ZGPATQ8N5A5 531 aaKnown RBP22.95■■□□□ 1.26
TSPAN4-204ENST00000397404 EYA3Q99504 573 aa22.95■■□□□ 1.26
TSPAN4-204ENST00000397404 ZAP70P43403 619 aa22.94■■□□□ 1.26
TSPAN4-204ENST00000397404 BCAMP50895 628 aa22.94■■□□□ 1.26
TSPAN4-204ENST00000397404 R3HDM1Q15032 1099 aaKnown RBP22.94■■□□□ 1.26
TSPAN4-204ENST00000397404 PDGFDQ9GZP0 370 aaPredicted RBP22.94■■□□□ 1.26
TSPAN4-204ENST00000397404 HMG20BQ9P0W2 317 aa22.94■■□□□ 1.26
TSPAN4-204ENST00000397404 LTBP1Q14766 1721 aa22.94■■□□□ 1.26
TSPAN4-204ENST00000397404 RNF113AO15541 343 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-204ENST00000397404 GPSM2P81274 684 aa22.93■■□□□ 1.26
TSPAN4-204ENST00000397404 MAP3K12Q12852 859 aa22.93■■□□□ 1.26
TSPAN4-204ENST00000397404 RASGRF1Q13972 1273 aa22.93■■□□□ 1.26
TSPAN4-204ENST00000397404 CWC27Q6UX04 472 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-204ENST00000397404 MPNDQ8N594 471 aa22.93■■□□□ 1.26
TSPAN4-204ENST00000397404 USP26Q9BXU7 913 aa22.93■■□□□ 1.26
TSPAN4-204ENST00000397404 IRS2Q9Y4H2 1338 aa22.93■■□□□ 1.26
TSPAN4-204ENST00000397404 UFL1O94874 794 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 DDRGK1Q96HY6 314 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 CD2APQ9Y5K6 639 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 ANAPC15P60006 121 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 UBE3CQ15386 1083 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 WASHC4Q2M389 1173 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 MCMDC2Q4G0Z9 681 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 PRPF40BQ6NWY9 871 aaKnown RBP22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 TTLL6Q8N841 843 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 SUPT20HQ8NEM7 779 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 TBC1D16Q8TBP0 767 aa22.92■■□□□ 1.26
TSPAN4-204ENST00000397404 FRAT2O75474 233 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-204ENST00000397404 ZBTB7AO95365 584 aa22.91■■□□□ 1.26
TSPAN4-204ENST00000397404 CYP2E1P05181 493 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-204ENST00000397404 GYG1P46976 350 aa22.91■■□□□ 1.26
TSPAN4-204ENST00000397404 SCARF1Q14162 830 aa22.91■■□□□ 1.26
TSPAN4-204ENST00000397404 DPP8Q6V1X1 898 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-204ENST00000397404 ANO2Q9NQ90 1003 aa22.91■■□□□ 1.26
TSPAN4-204ENST00000397404 SALL1Q9NSC2 1324 aa22.9■■□□□ 1.26
TSPAN4-204ENST00000397404 ZMYM1Q5SVZ6 1142 aa22.9■■□□□ 1.26
TSPAN4-204ENST00000397404 SPTY2D1Q68D10 685 aaPredicted RBP22.9■■□□□ 1.26
TSPAN4-204ENST00000397404 WDR66Q8TBY9 1149 aa22.9■■□□□ 1.26
TSPAN4-204ENST00000397404 MYH7P12883 1935 aa22.9■■□□□ 1.26
TSPAN4-204ENST00000397404 SNAP23O00161 211 aa22.89■■□□□ 1.25
TSPAN4-204ENST00000397404 NMIQ13287 307 aaPredicted RBP22.89■■□□□ 1.25
TSPAN4-204ENST00000397404 APPBP2Q92624 585 aa22.89■■□□□ 1.25
TSPAN4-204ENST00000397404 RTFDC1Q9BY42 306 aaPredicted RBP22.89■■□□□ 1.25
TSPAN4-204ENST00000397404 VPS33BQ9H267 617 aa22.89■■□□□ 1.25
TSPAN4-204ENST00000397404 DOCK2Q92608 1830 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms