RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 IFIT1P09914 478 aaKnown RBP29.03■■■□□ 2.24
TSPAN4-203ENST00000397397 AACSQ86V21 672 aa29.03■■■□□ 2.24
TSPAN4-203ENST00000397397 SUPT20HQ8NEM7 779 aa29.03■■■□□ 2.24
TSPAN4-203ENST00000397397 EAF2Q96CJ1 260 aaPredicted RBP29.03■■■□□ 2.24
TSPAN4-203ENST00000397397 GPR101Q96P66 508 aaPredicted RBP29.03■■■□□ 2.24
TSPAN4-203ENST00000397397 RTFDC1Q9BY42 306 aaPredicted RBP29.03■■■□□ 2.24
TSPAN4-203ENST00000397397 CHD1LQ86WJ1 897 aa29.03■■■□□ 2.24
TSPAN4-203ENST00000397397 LNPKQ9C0E8 428 aa29.03■■■□□ 2.24
TSPAN4-203ENST00000397397 FKBP4Q02790 459 aaKnown RBP eCLIP29.02■■■□□ 2.241e-6■■■■□ 24.5
TSPAN4-203ENST00000397397 PSMD1Q99460 953 aa29.02■■■□□ 2.24
TSPAN4-203ENST00000397397 CCDC8Q9H0W5 538 aaPredicted RBP29.02■■■□□ 2.24
TSPAN4-203ENST00000397397 IFIT2P09913 472 aaKnown RBP29.01■■■□□ 2.23
TSPAN4-203ENST00000397397 ARHGAP27Q6ZUM4 889 aa29.01■■■□□ 2.23
TSPAN4-203ENST00000397397 EYA3Q99504 573 aa29.01■■■□□ 2.23
TSPAN4-203ENST00000397397 ARAP2Q8WZ64 1704 aa29.01■■■□□ 2.23
TSPAN4-203ENST00000397397 KLRK1P26718 216 aa29■■■□□ 2.23
TSPAN4-203ENST00000397397 ADORA1P30542 326 aa29■■■□□ 2.23
TSPAN4-203ENST00000397397 TAOK3Q9H2K8 898 aa29■■■□□ 2.23
TSPAN4-203ENST00000397397 NFKBIEO00221 500 aa28.99■■■□□ 2.23
TSPAN4-203ENST00000397397 XAGE2Q96GT9 111 aa28.99■■■□□ 2.23
TSPAN4-203ENST00000397397 RIMBP2O15034 1052 aa28.98■■■□□ 2.23
TSPAN4-203ENST00000397397 WASHC4Q2M389 1173 aa28.98■■■□□ 2.23
TSPAN4-203ENST00000397397 C16orf71Q8IYS4 520 aaPredicted RBP28.98■■■□□ 2.23
TSPAN4-203ENST00000397397 DBNDD2Q9BQY9 259 aa28.98■■■□□ 2.23
TSPAN4-203ENST00000397397 ZC3H12CQ9C0D7 883 aaKnown RBP28.98■■■□□ 2.23
TSPAN4-203ENST00000397397 MED23Q9ULK4 1368 aa28.98■■■□□ 2.23
TSPAN4-203ENST00000397397 IRS2Q9Y4H2 1338 aa28.97■■■□□ 2.23
TSPAN4-203ENST00000397397 C15orf52Q6ZUT6 534 aaKnown RBP28.97■■■□□ 2.23
TSPAN4-203ENST00000397397 TLR7Q9NYK1 1049 aaKnown RBP28.97■■■□□ 2.23
TSPAN4-203ENST00000397397 DBNLQ9UJU6 430 aaKnown RBP28.97■■■□□ 2.23
TSPAN4-203ENST00000397397 LTBP3Q9NS15 1303 aa28.96■■■□□ 2.23
TSPAN4-203ENST00000397397 RASSF7Q02833 373 aa28.96■■■□□ 2.23
TSPAN4-203ENST00000397397 GORABQ5T7V8 394 aa28.96■■■□□ 2.23
TSPAN4-203ENST00000397397 TXNRD3Q86VQ6 643 aa28.96■■■□□ 2.23
TSPAN4-203ENST00000397397 ZNF277Q9NRM2 450 aaPredicted RBP28.96■■■□□ 2.23
TSPAN4-203ENST00000397397 GYG1P46976 350 aa28.95■■■□□ 2.23
TSPAN4-203ENST00000397397 CAVIN4Q5BKX8 364 aa28.95■■■□□ 2.23
TSPAN4-203ENST00000397397 ZNF784Q8NCA9 323 aaPredicted RBP28.95■■■□□ 2.23
TSPAN4-203ENST00000397397 PPIP5K2O43314 1243 aa28.94■■■□□ 2.22
TSPAN4-203ENST00000397397 AOC3Q16853 763 aa28.94■■■□□ 2.22
TSPAN4-203ENST00000397397 OTUD7AQ8TE49 926 aaPredicted RBP28.94■■■□□ 2.22
TSPAN4-203ENST00000397397 FAM84BQ96KN1 310 aaPredicted RBP28.94■■■□□ 2.22
TSPAN4-203ENST00000397397 BCAMP50895 628 aa28.93■■■□□ 2.22
TSPAN4-203ENST00000397397 KIAA2012Q0VF49 1180 aa28.93■■■□□ 2.22
TSPAN4-203ENST00000397397 ZNF804AQ7Z570 1209 aa28.93■■■□□ 2.22
TSPAN4-203ENST00000397397 VPS37DQ86XT2 251 aa28.93■■■□□ 2.22
TSPAN4-203ENST00000397397 VPS33BQ9H267 617 aa28.93■■■□□ 2.22
TSPAN4-203ENST00000397397 G3V3G9 751 aa28.92■■■□□ 2.22
TSPAN4-203ENST00000397397 HIBADHP31937 336 aaKnown RBP28.92■■■□□ 2.22
TSPAN4-203ENST00000397397 IARSP41252 1262 aaKnown RBP28.92■■■□□ 2.22
TSPAN4-203ENST00000397397 DCAF8Q5TAQ9 597 aa28.92■■■□□ 2.22
TSPAN4-203ENST00000397397 FBXO33Q7Z6M2 555 aa28.92■■■□□ 2.22
TSPAN4-203ENST00000397397 PHKA1P46020 1223 aa28.91■■■□□ 2.22
TSPAN4-203ENST00000397397 CCDC158Q5M9N0 1113 aa28.91■■■□□ 2.22
TSPAN4-203ENST00000397397 CCDC102BQ68D86 513 aa28.91■■■□□ 2.22
TSPAN4-203ENST00000397397 LARGE2Q8N3Y3 721 aa28.91■■■□□ 2.22
TSPAN4-203ENST00000397397 CCDC88AQ3V6T2 1871 aa28.91■■■□□ 2.22
TSPAN4-203ENST00000397397 PDE4AP27815 886 aa28.9■■■□□ 2.22
TSPAN4-203ENST00000397397 DOK7Q18PE1 504 aa28.9■■■□□ 2.22
TSPAN4-203ENST00000397397 TTC39AQ5SRH9 613 aa28.9■■■□□ 2.22
TSPAN4-203ENST00000397397 GPATCH3Q96I76 525 aa28.9■■■□□ 2.22
TSPAN4-203ENST00000397397 MX1P20591 662 aa28.88■■■□□ 2.21
TSPAN4-203ENST00000397397 COA1Q9GZY4 146 aa28.88■■■□□ 2.21
TSPAN4-203ENST00000397397 GNL3LQ9NVN8 582 aaKnown RBP28.88■■■□□ 2.21
TSPAN4-203ENST00000397397 SALL3Q9BXA9 1300 aa28.88■■■□□ 2.21
TSPAN4-203ENST00000397397 PRELPP51888 382 aa28.87■■■□□ 2.21
TSPAN4-203ENST00000397397 DBNDD1Q9H9R9 158 aa28.87■■■□□ 2.21
TSPAN4-203ENST00000397397 CD209Q9NNX6 404 aa28.87■■■□□ 2.21
TSPAN4-203ENST00000397397 ECHDC1Q9NTX5 307 aa28.87■■■□□ 2.21
TSPAN4-203ENST00000397397 SBF1O95248 1867 aa28.87■■■□□ 2.21
TSPAN4-203ENST00000397397 SKAP1Q86WV1 359 aa28.86■■■□□ 2.21
TSPAN4-203ENST00000397397 IQSEC3Q9UPP2 1182 aaPredicted RBP28.86■■■□□ 2.21
TSPAN4-203ENST00000397397 UQCRFS1P1P0C7P4 283 aa28.86■■■□□ 2.21
TSPAN4-203ENST00000397397 LMNB1P20700 586 aa28.86■■■□□ 2.21
TSPAN4-203ENST00000397397 TSHZ3Q63HK5 1081 aa28.86■■■□□ 2.21
TSPAN4-203ENST00000397397 PLEKHM2Q8IWE5 1019 aa28.86■■■□□ 2.21
TSPAN4-203ENST00000397397 NIM1KQ8IY84 436 aa28.86■■■□□ 2.21
TSPAN4-203ENST00000397397 TTC41PQ6P2S7 1318 aa28.85■■■□□ 2.21
TSPAN4-203ENST00000397397 ECE2O60344 883 aa28.85■■■□□ 2.21
TSPAN4-203ENST00000397397 FRAT2O75474 233 aaPredicted RBP28.85■■■□□ 2.21
TSPAN4-203ENST00000397397 ARID4AP29374 1257 aaPredicted RBP28.85■■■□□ 2.21
TSPAN4-203ENST00000397397 PDE1AP54750 535 aa28.85■■■□□ 2.21
TSPAN4-203ENST00000397397 STAP2Q9UGK3 403 aa28.85■■■□□ 2.21
TSPAN4-203ENST00000397397 COL4A5P29400 1685 aa28.84■■■□□ 2.21
TSPAN4-203ENST00000397397 IL1R1P14778 569 aa28.84■■■□□ 2.21
TSPAN4-203ENST00000397397 TDRD7Q8NHU6 1098 aaKnown RBP28.84■■■□□ 2.21
TSPAN4-203ENST00000397397 JDP2Q8WYK2 163 aa28.84■■■□□ 2.21
TSPAN4-203ENST00000397397 MYH13Q9UKX3 1938 aa28.84■■■□□ 2.21
TSPAN4-203ENST00000397397 ZNF512BQ96KM6 892 aaPredicted RBP28.83■■■□□ 2.21
TSPAN4-203ENST00000397397 DICER1Q9UPY3 1922 aaKnown RBP28.82■■■□□ 2.2
TSPAN4-203ENST00000397397 ATP5JP18859 108 aa28.82■■■□□ 2.2
TSPAN4-203ENST00000397397 PODNQ7Z5L7 613 aa28.82■■■□□ 2.2
TSPAN4-203ENST00000397397 ERC2O15083 957 aa28.81■■■□□ 2.2
TSPAN4-203ENST00000397397 RGS3P49796 1198 aa28.81■■■□□ 2.2
TSPAN4-203ENST00000397397 SEMA3EO15041 775 aa28.8■■■□□ 2.2
TSPAN4-203ENST00000397397 MCAMP43121 646 aa28.8■■■□□ 2.2
TSPAN4-203ENST00000397397 RASGRF1Q13972 1273 aa28.8■■■□□ 2.2
TSPAN4-203ENST00000397397 SCARF1Q14162 830 aa28.8■■■□□ 2.2
TSPAN4-203ENST00000397397 BOLA2Q9H3K6 86 aa28.8■■■□□ 2.2
TSPAN4-203ENST00000397397 RNF181Q9P0P0 153 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms