RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 RPAP1Q9BWH6 1393 aaPredicted RBP13.91□□□□□ -0.18
FGFR1-208ENST00000397108 SYT1P21579 422 aa13.91□□□□□ -0.18
FGFR1-208ENST00000397108 DDR1Q08345 913 aa13.91□□□□□ -0.18
FGFR1-208ENST00000397108 TRIM5Q9C035 493 aa13.91□□□□□ -0.18
FGFR1-208ENST00000397108 EXOC6BQ9Y2D4 811 aa13.91□□□□□ -0.18
FGFR1-208ENST00000397108 PARP3Q9Y6F1 533 aa13.91□□□□□ -0.18
FGFR1-208ENST00000397108 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
FGFR1-208ENST00000397108 NFIXQ14938 502 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 ELF2Q15723 593 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 CLEC4GQ6UXB4 293 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 CHPF2Q9P2E5 772 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 DBF4Q9UBU7 674 aaPredicted RBP13.9□□□□□ -0.18
FGFR1-208ENST00000397108 CACNA1FO60840 1977 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 STX6O43752 255 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 TAF7LQ5H9L4 462 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 CEP135Q66GS9 1140 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 ZSCAN25Q6NSZ9 544 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 SYT17Q9BSW7 474 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
FGFR1-208ENST00000397108 MAP3K15Q6ZN16 1313 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 USP27XA6NNY8 438 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 ERVV-1B6SEH8 477 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 KIF6Q6ZMV9 814 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 TMEM87AQ8NBN3 555 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 IL25Q9H293 177 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 CALCOCO1Q9P1Z2 691 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 CPA1P15085 419 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 TBC1D9BQ66K14 1250 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 TTLL7Q6ZT98 887 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 RPAP2Q8IXW5 612 aaPredicted RBP13.89□□□□□ -0.19
FGFR1-208ENST00000397108 GTF3C6Q969F1 213 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 ANKRD36CQ5JPF3 1778 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 ANXA1P04083 346 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 HNRNPH2P55795 449 aaKnown RBP13.89□□□□□ -0.19
FGFR1-208ENST00000397108 ARID5BQ14865 1188 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 SYCP1Q15431 976 aa13.89□□□□□ -0.19
FGFR1-208ENST00000397108 ZNF397Q8NF99 534 aaPredicted RBP13.89□□□□□ -0.19
FGFR1-208ENST00000397108 CACTINQ8WUQ7 758 aaKnown RBP13.89□□□□□ -0.19
FGFR1-208ENST00000397108 TRMT1Q9NXH9 659 aaKnown RBP13.89□□□□□ -0.19
FGFR1-208ENST00000397108 F13A1P00488 732 aa13.88□□□□□ -0.19
FGFR1-208ENST00000397108 HYPKQ9NX55 129 aa13.88□□□□□ -0.19
FGFR1-208ENST00000397108 PAXBP1Q9Y5B6 917 aa13.88□□□□□ -0.19
FGFR1-208ENST00000397108 TCHHQ07283 1943 aa13.88□□□□□ -0.19
FGFR1-208ENST00000397108 CARMIL3Q8ND23 1372 aa13.88□□□□□ -0.19
FGFR1-208ENST00000397108 CCDC30Q5VVM6 783 aa13.88□□□□□ -0.19
FGFR1-208ENST00000397108 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
FGFR1-208ENST00000397108 ATP10DQ9P241 1426 aa13.88□□□□□ -0.19
FGFR1-208ENST00000397108 MAP4K4O95819 1239 aaPredicted RBP13.87□□□□□ -0.19
FGFR1-208ENST00000397108 CHMLP26374 656 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 FAM173BQ6P4H8 233 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 SLC4A10Q6U841 1118 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 FAM200AQ8TCP9 573 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 CCDC144BQ3MJ40 725 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 CCDC144CPQ8IYA2 1237 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 XAGE3Q8WTP9 111 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 ARFGEF2Q9Y6D5 1785 aa13.87□□□□□ -0.19
FGFR1-208ENST00000397108 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
FGFR1-208ENST00000397108 TYRO3Q06418 890 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 HLFQ16534 295 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 ANO6Q4KMQ2 910 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 BICDL1Q6ZP65 573 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 COPS6Q7L5N1 327 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 SETDB2Q96T68 719 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 SMC3Q9UQE7 1217 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 TULP2O00295 520 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 SERPINB2P05120 415 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 NLGN2Q8NFZ4 835 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
FGFR1-208ENST00000397108 CBX8Q9HC52 389 aa13.86□□□□□ -0.19
FGFR1-208ENST00000397108 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
FGFR1-208ENST00000397108 LIG1P18858 919 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 FERMT3Q86UX7 667 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 ZBTB3Q9H5J0 574 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 ZNF446Q9NWS9 450 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 CLIP2Q9UDT6 1046 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.85□□□□□ -0.19
FGFR1-208ENST00000397108 ANKRD31Q8N7Z5 1873 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 GIGYF2Q6Y7W6 1299 aaKnown RBP13.85□□□□□ -0.19
FGFR1-208ENST00000397108 BRCA1P38398 1863 aaKnown RBP13.85□□□□□ -0.19
FGFR1-208ENST00000397108 LARGE1O95461 756 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 ZNF75DP51815 510 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 AK2P54819 239 aa13.85□□□□□ -0.19
FGFR1-208ENST00000397108 PXDNLA1KZ92 1463 aa13.84□□□□□ -0.19
FGFR1-208ENST00000397108 DLEC1Q9Y238 1755 aa13.84□□□□□ -0.19
FGFR1-208ENST00000397108 AIMP1Q12904 312 aaKnown RBP13.84□□□□□ -0.19
FGFR1-208ENST00000397108 MAP3K11Q16584 847 aa13.84□□□□□ -0.19
FGFR1-208ENST00000397108 CCDC83Q8IWF9 413 aa13.84□□□□□ -0.19
FGFR1-208ENST00000397108 NIP7Q9Y221 180 aaKnown RBP eCLIP13.84□□□□□ -0.19
FGFR1-208ENST00000397108 F6X3S4 739 aa13.84□□□□□ -0.19
FGFR1-208ENST00000397108 ANAPC15P60006 121 aa13.84□□□□□ -0.19
FGFR1-208ENST00000397108 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
FGFR1-208ENST00000397108 NUP62CLQ9H1M0 184 aa13.84□□□□□ -0.19
FGFR1-208ENST00000397108 POLR3GO15318 223 aaPredicted RBP13.83□□□□□ -0.2
FGFR1-208ENST00000397108 PTPN14Q15678 1187 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms