RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 C7orf43Q8WVR3 580 aa18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 XAGE2Q96GT9 111 aa18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 GPATCH3Q96I76 525 aa18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 ECHDC1Q9NTX5 307 aa18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 AK9Q5TCS8 1911 aa18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 MYH13Q9UKX3 1938 aa18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 IFIT1P09914 478 aaKnown RBP18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 PIM2Q9P1W9 311 aa18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
TM9SF1-202ENST00000396854 ZNF804BA4D1E1 1349 aa18.06■□□□□ 0.48
TM9SF1-202ENST00000396854 SNAP23O00161 211 aa18.06■□□□□ 0.48
TM9SF1-202ENST00000396854 ADORA1P30542 326 aa18.06■□□□□ 0.48
TM9SF1-202ENST00000396854 CC2D2BQ6DHV5 1058 aa18.06■□□□□ 0.48
TM9SF1-202ENST00000396854 KLHL34Q8N239 644 aa18.06■□□□□ 0.48
TM9SF1-202ENST00000396854 PI4K2BQ8TCG2 481 aa18.06■□□□□ 0.48
TM9SF1-202ENST00000396854 AKAP11Q9UKA4 1901 aa18.06■□□□□ 0.48
TM9SF1-202ENST00000396854 TMX4Q9H1E5 349 aaPredicted RBP18.05■□□□□ 0.48
TM9SF1-202ENST00000396854 NSFL1CQ9UNZ2 370 aaKnown RBP18.05■□□□□ 0.48
TM9SF1-202ENST00000396854 IRS2Q9Y4H2 1338 aa18.05■□□□□ 0.48
TM9SF1-202ENST00000396854 ATP2B4P23634 1241 aa18.05■□□□□ 0.48
TM9SF1-202ENST00000396854 KCNJ4P48050 445 aa18.05■□□□□ 0.48
TM9SF1-202ENST00000396854 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
TM9SF1-202ENST00000396854 FER1L6Q2WGJ9 1857 aa18.04■□□□□ 0.48
TM9SF1-202ENST00000396854 ERC2O15083 957 aa18.04■□□□□ 0.48
TM9SF1-202ENST00000396854 BMP2KLQ5H9B9 411 aa18.04■□□□□ 0.48
TM9SF1-202ENST00000396854 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
TM9SF1-202ENST00000396854 GGA1Q9UJY5 639 aa18.04■□□□□ 0.48
TM9SF1-202ENST00000396854 WTIPA6NIX2 430 aaPredicted RBP18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 GLRX3O76003 335 aaKnown RBP18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 C15orf52Q6ZUT6 534 aaKnown RBP18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 MPNDQ8N594 471 aa18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 ATP5JP18859 108 aa18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 GRIPAP1Q4V328 841 aa18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 CCDC158Q5M9N0 1113 aa18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 OLFM4Q6UX06 510 aa18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 TBC1D16Q8TBP0 767 aa18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 ZNF512BQ96KM6 892 aaPredicted RBP18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 FHDC1Q9C0D6 1143 aaPredicted RBP18.03■□□□□ 0.48
TM9SF1-202ENST00000396854 UFL1O94874 794 aa18.02■□□□□ 0.48
TM9SF1-202ENST00000396854 GSPT1P15170 499 aaKnown RBP18.02■□□□□ 0.48
TM9SF1-202ENST00000396854 DALRD3Q5D0E6 543 aaKnown RBP18.02■□□□□ 0.48
TM9SF1-202ENST00000396854 GORABQ5T7V8 394 aa18.02■□□□□ 0.48
TM9SF1-202ENST00000396854 MED23Q9ULK4 1368 aa18.02■□□□□ 0.47
TM9SF1-202ENST00000396854 CCDC102BQ68D86 513 aa18.02■□□□□ 0.47
TM9SF1-202ENST00000396854 DPP8Q6V1X1 898 aaPredicted RBP18.02■□□□□ 0.47
TM9SF1-202ENST00000396854 TBC1D2Q9BYX2 928 aa18.02■□□□□ 0.47
TM9SF1-202ENST00000396854 POLLQ9UGP5 575 aa18.02■□□□□ 0.47
TM9SF1-202ENST00000396854 C21orf2O43822 256 aa18.01■□□□□ 0.47
TM9SF1-202ENST00000396854 ARID4AP29374 1257 aaPredicted RBP18.01■□□□□ 0.47
TM9SF1-202ENST00000396854 SOGA3Q5TF21 947 aa18.01■□□□□ 0.47
TM9SF1-202ENST00000396854 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
TM9SF1-202ENST00000396854 ZBTB22O15209 634 aa18■□□□□ 0.47
TM9SF1-202ENST00000396854 KLRK1P26718 216 aa18■□□□□ 0.47
TM9SF1-202ENST00000396854 PHKA1P46020 1223 aa18■□□□□ 0.47
TM9SF1-202ENST00000396854 CCDC93Q567U6 631 aa18■□□□□ 0.47
TM9SF1-202ENST00000396854 TTC39AQ5SRH9 613 aa18■□□□□ 0.47
TM9SF1-202ENST00000396854 CAVIN4Q5BKX8 364 aa18■□□□□ 0.47
TM9SF1-202ENST00000396854 FBXO33Q7Z6M2 555 aa18■□□□□ 0.47
TM9SF1-202ENST00000396854 FAM84BQ96KN1 310 aaPredicted RBP18■□□□□ 0.47
TM9SF1-202ENST00000396854 UQCRFS1P1P0C7P4 283 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 ZNF219Q9P2Y4 722 aaPredicted RBP17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 DOCK2Q92608 1830 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 C6orf229H3BNL8 230 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 GYG1P46976 350 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 BCAMP50895 628 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 TXNRD3Q86VQ6 643 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 RTKN2Q8IZC4 609 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 IL27Q8NEV9 243 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 HAUS7Q99871 368 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 SYT17Q9BSW7 474 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 BOLA2Q9H3K6 86 aa17.99■□□□□ 0.47
TM9SF1-202ENST00000396854 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
TM9SF1-202ENST00000396854 MYH7P12883 1935 aa17.98■□□□□ 0.47
TM9SF1-202ENST00000396854 HIBADHP31937 336 aaKnown RBP17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 GPR101Q96P66 508 aaPredicted RBP17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 PSMD1Q99460 953 aa17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 EYA3Q99504 573 aa17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 MCAMP43121 646 aa17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 VPS37DQ86XT2 251 aa17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 SUPT20HQ8NEM7 779 aa17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 GNL3LQ9NVN8 582 aaKnown RBP17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 MYO5AQ9Y4I1 1855 aaKnown RBP17.97■□□□□ 0.47
TM9SF1-202ENST00000396854 CHD4Q14839 1912 aa17.96■□□□□ 0.47
TM9SF1-202ENST00000396854 SDSP20132 328 aa17.96■□□□□ 0.47
TM9SF1-202ENST00000396854 SCARF1Q14162 830 aa17.96■□□□□ 0.47
TM9SF1-202ENST00000396854 ZNF804AQ7Z570 1209 aa17.96■□□□□ 0.47
TM9SF1-202ENST00000396854 BCS1LQ9Y276 419 aa17.96■□□□□ 0.47
TM9SF1-202ENST00000396854 SEMA3EO15041 775 aa17.95■□□□□ 0.46
TM9SF1-202ENST00000396854 COL1A1P02452 1464 aaPredicted RBP17.95■□□□□ 0.46
TM9SF1-202ENST00000396854 PDS5AQ29RF7 1337 aaKnown RBP17.95■□□□□ 0.46
TM9SF1-202ENST00000396854 RASGRF1Q13972 1273 aa17.95■□□□□ 0.46
TM9SF1-202ENST00000396854 WASHC4Q2M389 1173 aa17.95■□□□□ 0.46
TM9SF1-202ENST00000396854 CNTROBQ8N137 903 aa17.95■□□□□ 0.46
TM9SF1-202ENST00000396854 ZC3H12CQ9C0D7 883 aaKnown RBP17.95■□□□□ 0.46
TM9SF1-202ENST00000396854 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms