RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 LPIN2Q92539 896 aa20.29■□□□□ 0.84
AP1S3-202ENST00000396653 IFIT1P09914 478 aaKnown RBP20.28■□□□□ 0.84
AP1S3-202ENST00000396653 SLC5A1P13866 664 aa20.28■□□□□ 0.84
AP1S3-202ENST00000396653 ATP2B3Q16720 1220 aa20.28■□□□□ 0.84
AP1S3-202ENST00000396653 JDP2Q8WYK2 163 aa20.28■□□□□ 0.84
AP1S3-202ENST00000396653 KIF1BPQ96EK5 621 aa20.28■□□□□ 0.84
AP1S3-202ENST00000396653 GPR101Q96P66 508 aaPredicted RBP20.28■□□□□ 0.84
AP1S3-202ENST00000396653 WTIPA6NIX2 430 aaPredicted RBP20.27■□□□□ 0.84
AP1S3-202ENST00000396653 SNAP23O00161 211 aa20.27■□□□□ 0.84
AP1S3-202ENST00000396653 NIM1KQ8IY84 436 aa20.27■□□□□ 0.84
AP1S3-202ENST00000396653 RWDD1Q9H446 243 aaPredicted RBP20.27■□□□□ 0.84
AP1S3-202ENST00000396653 ZNF646O15015 1829 aaPredicted RBP20.27■□□□□ 0.84
AP1S3-202ENST00000396653 SCN9AQ15858 1988 aa20.26■□□□□ 0.83
AP1S3-202ENST00000396653 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
AP1S3-202ENST00000396653 KLRK1P26718 216 aa20.26■□□□□ 0.83
AP1S3-202ENST00000396653 RHPN1Q8TCX5 695 aa20.26■□□□□ 0.83
AP1S3-202ENST00000396653 COA1Q9GZY4 146 aa20.26■□□□□ 0.83
AP1S3-202ENST00000396653 TNNI3KQ59H18 835 aa20.25■□□□□ 0.83
AP1S3-202ENST00000396653 ERICH6BQ5W0A0 696 aa20.25■□□□□ 0.83
AP1S3-202ENST00000396653 ZNF804AQ7Z570 1209 aa20.25■□□□□ 0.83
AP1S3-202ENST00000396653 TXNRD3Q86VQ6 643 aa20.25■□□□□ 0.83
AP1S3-202ENST00000396653 GCC1Q96CN9 775 aa20.25■□□□□ 0.83
AP1S3-202ENST00000396653 FPGT-TNNI3KV9GXZ4 949 aa20.25■□□□□ 0.83
AP1S3-202ENST00000396653 A0A1B0GUL7 405 aa20.24■□□□□ 0.83
AP1S3-202ENST00000396653 FZD9O00144 591 aa20.24■□□□□ 0.83
AP1S3-202ENST00000396653 PODNQ7Z5L7 613 aa20.24■□□□□ 0.83
AP1S3-202ENST00000396653 ZNRF3Q9ULT6 936 aa20.24■□□□□ 0.83
AP1S3-202ENST00000396653 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.24■□□□□ 0.83
AP1S3-202ENST00000396653 G3V3G9 751 aa20.23■□□□□ 0.83
AP1S3-202ENST00000396653 ZBTB22O15209 634 aa20.23■□□□□ 0.83
AP1S3-202ENST00000396653 ECE2O60344 883 aa20.23■□□□□ 0.83
AP1S3-202ENST00000396653 CAVIN4Q5BKX8 364 aa20.23■□□□□ 0.83
AP1S3-202ENST00000396653 DCAF8Q5TAQ9 597 aa20.23■□□□□ 0.83
AP1S3-202ENST00000396653 LRRCC1Q9C099 1032 aa20.23■□□□□ 0.83
AP1S3-202ENST00000396653 UTRNP46939 3433 aa20.23■□□□□ 0.83
AP1S3-202ENST00000396653 HIBADHP31937 336 aaKnown RBP20.22■□□□□ 0.83
AP1S3-202ENST00000396653 FBXO33Q7Z6M2 555 aa20.22■□□□□ 0.83
AP1S3-202ENST00000396653 SMC5Q8IY18 1101 aa20.22■□□□□ 0.83
AP1S3-202ENST00000396653 CLASRPQ8N2M8 674 aaKnown RBP20.22■□□□□ 0.83
AP1S3-202ENST00000396653 FAM84BQ96KN1 310 aaPredicted RBP20.22■□□□□ 0.83
AP1S3-202ENST00000396653 DBNDD1Q9H9R9 158 aa20.22■□□□□ 0.83
AP1S3-202ENST00000396653 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
AP1S3-202ENST00000396653 IL1R1P14778 569 aa20.21■□□□□ 0.83
AP1S3-202ENST00000396653 EIF6P56537 245 aaKnown RBP20.21■□□□□ 0.83
AP1S3-202ENST00000396653 DOK7Q18PE1 504 aa20.21■□□□□ 0.83
AP1S3-202ENST00000396653 YDJCA8MPS7 323 aa20.2■□□□□ 0.82
AP1S3-202ENST00000396653 IGHDP01880 384 aa20.2■□□□□ 0.82
AP1S3-202ENST00000396653 GYG1P46976 350 aa20.2■□□□□ 0.82
AP1S3-202ENST00000396653 TIMM10P62072 90 aa20.2■□□□□ 0.82
AP1S3-202ENST00000396653 XAGE2Q96GT9 111 aa20.2■□□□□ 0.82
AP1S3-202ENST00000396653 APBB1O00213 710 aa20.19■□□□□ 0.82
AP1S3-202ENST00000396653 ADORA1P30542 326 aa20.19■□□□□ 0.82
AP1S3-202ENST00000396653 VPS37DQ86XT2 251 aa20.19■□□□□ 0.82
AP1S3-202ENST00000396653 TDRD7Q8NHU6 1098 aaKnown RBP20.19■□□□□ 0.82
AP1S3-202ENST00000396653 EAF2Q96CJ1 260 aaPredicted RBP20.19■□□□□ 0.82
AP1S3-202ENST00000396653 NEUROD6Q96NK8 337 aa20.19■□□□□ 0.82
AP1S3-202ENST00000396653 IL1RAPL2Q9NP60 686 aa20.19■□□□□ 0.82
AP1S3-202ENST00000396653 AACSQ86V21 672 aa20.18■□□□□ 0.82
AP1S3-202ENST00000396653 GNL3LQ9NVN8 582 aaKnown RBP20.18■□□□□ 0.82
AP1S3-202ENST00000396653 ZNF541Q9H0D2 1346 aa20.18■□□□□ 0.82
AP1S3-202ENST00000396653 WDR90Q96KV7 1748 aa20.18■□□□□ 0.82
AP1S3-202ENST00000396653 SEMA3EO15041 775 aa20.17■□□□□ 0.82
AP1S3-202ENST00000396653 BCAMP50895 628 aa20.17■□□□□ 0.82
AP1S3-202ENST00000396653 CXCL9Q07325 125 aa20.17■□□□□ 0.82
AP1S3-202ENST00000396653 CCDC102BQ68D86 513 aa20.17■□□□□ 0.82
AP1S3-202ENST00000396653 CIAPIN1Q6FI81 312 aa20.17■□□□□ 0.82
AP1S3-202ENST00000396653 DBNDD2Q9BQY9 259 aa20.17■□□□□ 0.82
AP1S3-202ENST00000396653 DBNLQ9UJU6 430 aaKnown RBP20.17■□□□□ 0.82
AP1S3-202ENST00000396653 AKAP11Q9UKA4 1901 aa20.17■□□□□ 0.82
AP1S3-202ENST00000396653 SCN4AP35499 1836 aa20.16■□□□□ 0.82
AP1S3-202ENST00000396653 PHKA1P46020 1223 aa20.16■□□□□ 0.82
AP1S3-202ENST00000396653 TNIP1Q15025 636 aa20.16■□□□□ 0.82
AP1S3-202ENST00000396653 STRIP1Q5VSL9 837 aa20.16■□□□□ 0.82
AP1S3-202ENST00000396653 DPY19L2Q6NUT2 758 aa20.16■□□□□ 0.82
AP1S3-202ENST00000396653 GPC2Q8N158 579 aa20.16■□□□□ 0.82
AP1S3-202ENST00000396653 FAM205AQ6ZU69 1335 aa20.16■□□□□ 0.82
AP1S3-202ENST00000396653 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
AP1S3-202ENST00000396653 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
AP1S3-202ENST00000396653 GLTPD2A6NH11 291 aa20.15■□□□□ 0.82
AP1S3-202ENST00000396653 IFIT2P09913 472 aaKnown RBP20.15■□□□□ 0.82
AP1S3-202ENST00000396653 ARID4AP29374 1257 aaPredicted RBP20.15■□□□□ 0.82
AP1S3-202ENST00000396653 CCDC158Q5M9N0 1113 aa20.15■□□□□ 0.82
AP1S3-202ENST00000396653 GORABQ5T7V8 394 aa20.15■□□□□ 0.82
AP1S3-202ENST00000396653 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
AP1S3-202ENST00000396653 ZNF512BQ96KM6 892 aaPredicted RBP20.15■□□□□ 0.82
AP1S3-202ENST00000396653 CCDC8Q9H0W5 538 aaPredicted RBP20.15■□□□□ 0.82
AP1S3-202ENST00000396653 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
AP1S3-202ENST00000396653 PDS5AQ29RF7 1337 aaKnown RBP20.15■□□□□ 0.82
AP1S3-202ENST00000396653 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.81
AP1S3-202ENST00000396653 RAD17O75943 681 aa20.14■□□□□ 0.81
AP1S3-202ENST00000396653 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
AP1S3-202ENST00000396653 UQCRFS1P1P0C7P4 283 aa20.14■□□□□ 0.81
AP1S3-202ENST00000396653 FKBP1AP62942 108 aaKnown RBP20.14■□□□□ 0.81
AP1S3-202ENST00000396653 TLR7Q9NYK1 1049 aaKnown RBP20.14■□□□□ 0.81
AP1S3-202ENST00000396653 COL1A1P02452 1464 aaPredicted RBP20.13■□□□□ 0.81
AP1S3-202ENST00000396653 MYO3BQ8WXR4 1341 aa20.13■□□□□ 0.81
AP1S3-202ENST00000396653 PSMD14O00487 310 aa20.13■□□□□ 0.81
AP1S3-202ENST00000396653 ANKRD45Q5TZF3 282 aa20.13■□□□□ 0.81
AP1S3-202ENST00000396653 DENND2AQ9ULE3 1009 aa20.13■□□□□ 0.81
AP1S3-202ENST00000396653 KDM2BQ8NHM5 1336 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms