RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PDE8AO60658 829 aa10.98□□□□□ -0.65
SCFD1-202ENST00000396629 DACT2Q5SW24 774 aa10.98□□□□□ -0.65
SCFD1-202ENST00000396629 ARMC9Q7Z3E5 817 aa10.98□□□□□ -0.65
SCFD1-202ENST00000396629 MYH3P11055 1940 aa10.98□□□□□ -0.65
SCFD1-202ENST00000396629 MED23Q9ULK4 1368 aa10.98□□□□□ -0.65
SCFD1-202ENST00000396629 PCCAP05165 728 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-202ENST00000396629 INHBEP58166 350 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 OTOP1Q7RTM1 612 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 ANKRD18AQ8IVF6 992 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 MYO3BQ8WXR4 1341 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 ECM29Q5VYK3 1845 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 OGFOD1Q8N543 542 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 CCDC191Q8NCU4 936 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 MXD3Q9BW11 206 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 TRIM17Q9Y577 477 aa10.97□□□□□ -0.65
SCFD1-202ENST00000396629 MANSC4A6NHS7 340 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-202ENST00000396629 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-202ENST00000396629 FXR1P51114 621 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCFD1-202ENST00000396629 STRIP1Q5VSL9 837 aa10.96□□□□□ -0.65
SCFD1-202ENST00000396629 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.65
SCFD1-202ENST00000396629 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
SCFD1-202ENST00000396629 APOBEC3FQ8IUX4 373 aaKnown RBP10.96□□□□□ -0.65
SCFD1-202ENST00000396629 ZBED3Q96IU2 234 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-202ENST00000396629 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
SCFD1-202ENST00000396629 COL1A1P02452 1464 aaPredicted RBP10.96□□□□□ -0.66
SCFD1-202ENST00000396629 MAP3K11Q16584 847 aa10.96□□□□□ -0.66
SCFD1-202ENST00000396629 SASH1O94885 1247 aa10.95□□□□□ -0.66
SCFD1-202ENST00000396629 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
SCFD1-202ENST00000396629 PRKG1Q13976 671 aa10.95□□□□□ -0.66
SCFD1-202ENST00000396629 DUSP27Q5VZP5 1158 aa10.95□□□□□ -0.66
SCFD1-202ENST00000396629 ARMC5Q96C12 935 aa10.95□□□□□ -0.66
SCFD1-202ENST00000396629 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
SCFD1-202ENST00000396629 MYD88Q99836 296 aa10.95□□□□□ -0.66
SCFD1-202ENST00000396629 COA1Q9GZY4 146 aa10.95□□□□□ -0.66
SCFD1-202ENST00000396629 ANGEL1Q9UNK9 670 aaKnown RBP10.95□□□□□ -0.66
SCFD1-202ENST00000396629 PTPN22Q9Y2R2 807 aa10.95□□□□□ -0.66
SCFD1-202ENST00000396629 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
SCFD1-202ENST00000396629 SLC10A4Q96EP9 437 aa10.94□□□□□ -0.66
SCFD1-202ENST00000396629 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
SCFD1-202ENST00000396629 CDC5LQ99459 802 aaKnown RBP10.94□□□□□ -0.66
SCFD1-202ENST00000396629 PHAXQ9H814 394 aaKnown RBP10.94□□□□□ -0.66
SCFD1-202ENST00000396629 BSDC1Q9NW68 430 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-202ENST00000396629 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-202ENST00000396629 MINPP1Q9UNW1 487 aa10.94□□□□□ -0.66
SCFD1-202ENST00000396629 IGF2BP3O00425 579 aaKnown RBP eCLIP10.94□□□□□ -0.66
SCFD1-202ENST00000396629 ZBTB48P10074 688 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-202ENST00000396629 CCT4P50991 539 aaKnown RBP10.94□□□□□ -0.66
SCFD1-202ENST00000396629 JARID2Q92833 1246 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-202ENST00000396629 WNK4Q96J92 1243 aa10.94□□□□□ -0.66
SCFD1-202ENST00000396629 HTTP42858 3142 aa10.94□□□□□ -0.66
SCFD1-202ENST00000396629 KIAA0100Q14667 2235 aaKnown RBP10.93□□□□□ -0.66
SCFD1-202ENST00000396629 UNCXA6NJT0 531 aa10.93□□□□□ -0.66
SCFD1-202ENST00000396629 EN2P19622 333 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-202ENST00000396629 CTSWP56202 376 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 TTLL5Q6EMB2 1281 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 TXNRD3Q86VQ6 643 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 CD99L2Q8TCZ2 262 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 FBXW7Q969H0 707 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 METTL22Q9BUU2 404 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-202ENST00000396629 FZD1Q9UP38 647 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 LEMD3Q9Y2U8 911 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 SSC5DA1L4H1 1573 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 TTLL11Q8NHH1 800 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 RUNDC1Q96C34 613 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 DEFB129Q9H1M3 183 aa10.92□□□□□ -0.66
SCFD1-202ENST00000396629 MKI67P46013 3256 aaKnown RBP10.91□□□□□ -0.66
SCFD1-202ENST00000396629 TESPA1A2RU30 521 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-202ENST00000396629 ZNF853P0CG23 659 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 KIAA0825Q8IV33 1275 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 CLMNQ96JQ2 1002 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 EFCC1Q9HA90 598 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 MBIPQ9NS73 344 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 PPP2R3BQ9Y5P8 575 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 PPP1R12BO60237 982 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-202ENST00000396629 CAP1Q01518 475 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 CRHR2Q13324 411 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 OTUD7BQ6GQQ9 843 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 GREM2Q9H772 168 aa10.91□□□□□ -0.66
SCFD1-202ENST00000396629 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-202ENST00000396629 OTOFQ9HC10 1997 aa10.9□□□□□ -0.66
SCFD1-202ENST00000396629 GJA5P36382 358 aa10.9□□□□□ -0.66
SCFD1-202ENST00000396629 SP3Q02447 781 aa10.9□□□□□ -0.66
SCFD1-202ENST00000396629 RALBP1Q15311 655 aa10.9□□□□□ -0.66
SCFD1-202ENST00000396629 ZNF804BA4D1E1 1349 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 GTF2IP78347 998 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 DLGAP5Q15398 846 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 ZNF333Q96JL9 665 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 PTPN18Q99952 460 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 TMEM106CQ9BVX2 250 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 USP2O75604 605 aaPredicted RBP10.89□□□□□ -0.67
SCFD1-202ENST00000396629 DDX58O95786 925 aaKnown RBP10.89□□□□□ -0.67
SCFD1-202ENST00000396629 IGKV5-2P06315 115 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 KLRK1P26718 216 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 SUPT20HL1Q3ZLR7 823 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 ANKRD2Q9GZV1 360 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 A0A1B0GUL6 1792 aa10.89□□□□□ -0.67
SCFD1-202ENST00000396629 CD209Q9NNX6 404 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms