RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 LRRFIP1Q32MZ4 808 aaKnown RBP18.72■□□□□ 0.59
VAMP1-202ENST00000396308 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
VAMP1-202ENST00000396308 HAUS7Q99871 368 aa18.72■□□□□ 0.59
VAMP1-202ENST00000396308 ZNF804BA4D1E1 1349 aa18.72■□□□□ 0.59
VAMP1-202ENST00000396308 MAP4K4O95819 1239 aaPredicted RBP18.71■□□□□ 0.59
VAMP1-202ENST00000396308 ZNF512BQ96KM6 892 aaPredicted RBP18.71■□□□□ 0.59
VAMP1-202ENST00000396308 FSD1Q9BTV5 496 aa18.71■□□□□ 0.59
VAMP1-202ENST00000396308 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
VAMP1-202ENST00000396308 ATP6V0A2Q9Y487 856 aa18.71■□□□□ 0.59
VAMP1-202ENST00000396308 LTBP1Q14766 1721 aa18.71■□□□□ 0.59
VAMP1-202ENST00000396308 RFX7Q2KHR2 1363 aa18.7■□□□□ 0.58
VAMP1-202ENST00000396308 CCDC102BQ68D86 513 aa18.7■□□□□ 0.58
VAMP1-202ENST00000396308 DIAPH3Q9NSV4 1193 aa18.7■□□□□ 0.58
VAMP1-202ENST00000396308 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
VAMP1-202ENST00000396308 AKAP11Q9UKA4 1901 aa18.7■□□□□ 0.58
VAMP1-202ENST00000396308 SLX4Q8IY92 1834 aa18.7■□□□□ 0.58
VAMP1-202ENST00000396308 UFL1O94874 794 aa18.69■□□□□ 0.58
VAMP1-202ENST00000396308 ARID4AP29374 1257 aaPredicted RBP18.69■□□□□ 0.58
VAMP1-202ENST00000396308 TTF1Q15361 905 aaPredicted RBP18.69■□□□□ 0.58
VAMP1-202ENST00000396308 PRPF40BQ6NWY9 871 aaKnown RBP18.69■□□□□ 0.58
VAMP1-202ENST00000396308 TBC1D9Q6ZT07 1266 aa18.69■□□□□ 0.58
VAMP1-202ENST00000396308 RUFY2Q8WXA3 655 aa18.69■□□□□ 0.58
VAMP1-202ENST00000396308 PAG1Q9NWQ8 432 aa18.69■□□□□ 0.58
VAMP1-202ENST00000396308 KIAA1551Q9HCM1 1747 aa18.69■□□□□ 0.58
VAMP1-202ENST00000396308 DUOX1Q9NRD9 1551 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 CHRNA5P30532 468 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 TGFB2P61812 414 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 GPSM2P81274 684 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 FKBP4Q02790 459 aaKnown RBP eCLIP18.68■□□□□ 0.58
VAMP1-202ENST00000396308 CC2D2BQ6DHV5 1058 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 ZNF804AQ7Z570 1209 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 SPON1Q9HCB6 807 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 PODXL2Q9NZ53 605 aa18.68■□□□□ 0.58
VAMP1-202ENST00000396308 DOCK2Q92608 1830 aa18.67■□□□□ 0.58
VAMP1-202ENST00000396308 GOLIM4O00461 696 aa18.67■□□□□ 0.58
VAMP1-202ENST00000396308 SEMA3EO15041 775 aa18.67■□□□□ 0.58
VAMP1-202ENST00000396308 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
VAMP1-202ENST00000396308 PHKA1P46020 1223 aa18.67■□□□□ 0.58
VAMP1-202ENST00000396308 GRIPAP1Q4V328 841 aa18.67■□□□□ 0.58
VAMP1-202ENST00000396308 DPP8Q6V1X1 898 aaPredicted RBP18.67■□□□□ 0.58
VAMP1-202ENST00000396308 KLHL34Q8N239 644 aa18.67■□□□□ 0.58
VAMP1-202ENST00000396308 PPP1R1BQ9UD71 204 aaPredicted RBP18.67■□□□□ 0.58
VAMP1-202ENST00000396308 C6orf229H3BNL8 230 aa18.66■□□□□ 0.58
VAMP1-202ENST00000396308 MPNDQ8N594 471 aa18.66■□□□□ 0.58
VAMP1-202ENST00000396308 TTLL6Q8N841 843 aa18.66■□□□□ 0.58
VAMP1-202ENST00000396308 EYA3Q99504 573 aa18.66■□□□□ 0.58
VAMP1-202ENST00000396308 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.66■□□□□ 0.58
VAMP1-202ENST00000396308 CD2APQ9Y5K6 639 aa18.66■□□□□ 0.58
VAMP1-202ENST00000396308 BRCA1P38398 1863 aaKnown RBP18.66■□□□□ 0.58
VAMP1-202ENST00000396308 MED23Q9ULK4 1368 aa18.66■□□□□ 0.58
VAMP1-202ENST00000396308 REC8O95072 547 aa18.65■□□□□ 0.58
VAMP1-202ENST00000396308 HIBADHP31937 336 aaKnown RBP18.65■□□□□ 0.58
VAMP1-202ENST00000396308 SOGA3Q5TF21 947 aa18.65■□□□□ 0.58
VAMP1-202ENST00000396308 ZSCAN25Q6NSZ9 544 aa18.65■□□□□ 0.58
VAMP1-202ENST00000396308 C15orf52Q6ZUT6 534 aaKnown RBP18.65■□□□□ 0.58
VAMP1-202ENST00000396308 KBTBD3Q8NAB2 608 aa18.65■□□□□ 0.58
VAMP1-202ENST00000396308 DENND2AQ9ULE3 1009 aa18.65■□□□□ 0.58
VAMP1-202ENST00000396308 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
VAMP1-202ENST00000396308 SNAP23O00161 211 aa18.64■□□□□ 0.57
VAMP1-202ENST00000396308 CHMLP26374 656 aa18.64■□□□□ 0.57
VAMP1-202ENST00000396308 MCAMP43121 646 aa18.64■□□□□ 0.57
VAMP1-202ENST00000396308 GYG1P46976 350 aa18.64■□□□□ 0.57
VAMP1-202ENST00000396308 BCAMP50895 628 aa18.64■□□□□ 0.57
VAMP1-202ENST00000396308 MFAP1P55081 439 aaKnown RBP18.64■□□□□ 0.57
VAMP1-202ENST00000396308 SPATA5Q8NB90 893 aa18.64■□□□□ 0.57
VAMP1-202ENST00000396308 SUPT20HQ8NEM7 779 aa18.64■□□□□ 0.57
VAMP1-202ENST00000396308 CCDC88AQ3V6T2 1871 aa18.64■□□□□ 0.57
VAMP1-202ENST00000396308 G3V3G9 751 aa18.63■□□□□ 0.57
VAMP1-202ENST00000396308 DPEP1P16444 411 aa18.63■□□□□ 0.57
VAMP1-202ENST00000396308 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
VAMP1-202ENST00000396308 DCAF8Q5TAQ9 597 aa18.63■□□□□ 0.57
VAMP1-202ENST00000396308 TBC1D16Q8TBP0 767 aa18.63■□□□□ 0.57
VAMP1-202ENST00000396308 SNRKQ9NRH2 765 aa18.63■□□□□ 0.57
VAMP1-202ENST00000396308 PIM2Q9P1W9 311 aa18.63■□□□□ 0.57
VAMP1-202ENST00000396308 RAD50Q92878 1312 aa18.63■□□□□ 0.57
VAMP1-202ENST00000396308 ZFYP08048 801 aaPredicted RBP18.62■□□□□ 0.57
VAMP1-202ENST00000396308 ZAP70P43403 619 aa18.62■□□□□ 0.57
VAMP1-202ENST00000396308 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
VAMP1-202ENST00000396308 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
VAMP1-202ENST00000396308 FBXO33Q7Z6M2 555 aa18.62■□□□□ 0.57
VAMP1-202ENST00000396308 SGIP1Q9BQI5 828 aa18.62■□□□□ 0.57
VAMP1-202ENST00000396308 PDS5AQ29RF7 1337 aaKnown RBP18.62■□□□□ 0.57
VAMP1-202ENST00000396308 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
VAMP1-202ENST00000396308 PTGER2P43116 358 aa18.61■□□□□ 0.57
VAMP1-202ENST00000396308 SCARF1Q14162 830 aa18.61■□□□□ 0.57
VAMP1-202ENST00000396308 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
VAMP1-202ENST00000396308 FAM84BQ96KN1 310 aaPredicted RBP18.61■□□□□ 0.57
VAMP1-202ENST00000396308 ESYT1Q9BSJ8 1104 aa18.61■□□□□ 0.57
VAMP1-202ENST00000396308 ZC3H12CQ9C0D7 883 aaKnown RBP18.61■□□□□ 0.57
VAMP1-202ENST00000396308 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
VAMP1-202ENST00000396308 HMG20BQ9P0W2 317 aa18.61■□□□□ 0.57
VAMP1-202ENST00000396308 MYO5AQ9Y4I1 1855 aaKnown RBP18.6■□□□□ 0.57
VAMP1-202ENST00000396308 RTKN2Q8IZC4 609 aa18.6■□□□□ 0.57
VAMP1-202ENST00000396308 ZGPATQ8N5A5 531 aaKnown RBP18.6■□□□□ 0.57
VAMP1-202ENST00000396308 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
VAMP1-202ENST00000396308 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
VAMP1-202ENST00000396308 NDUFB9Q9Y6M9 179 aa18.6■□□□□ 0.57
VAMP1-202ENST00000396308 ARFGEF1Q9Y6D6 1849 aa18.59■□□□□ 0.57
VAMP1-202ENST00000396308 ZBTB22O15209 634 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms