RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 RGS22Q8NE09 1264 aa10.14□□□□□ -0.79
BDNF-204ENST00000395980 METTL22Q9BUU2 404 aaPredicted RBP10.14□□□□□ -0.79
BDNF-204ENST00000395980 HELLSQ9NRZ9 838 aa10.14□□□□□ -0.79
BDNF-204ENST00000395980 H2AFXP16104 143 aaPredicted RBP10.14□□□□□ -0.79
BDNF-204ENST00000395980 ELF2Q15723 593 aa10.14□□□□□ -0.79
BDNF-204ENST00000395980 NBPF11Q86T75 865 aa10.14□□□□□ -0.79
BDNF-204ENST00000395980 KBTBD3Q8NAB2 608 aa10.14□□□□□ -0.79
BDNF-204ENST00000395980 TPM4P67936 248 aa10.14□□□□□ -0.79
BDNF-204ENST00000395980 STOX1Q6ZVD7 989 aa10.14□□□□□ -0.79
BDNF-204ENST00000395980 ME1P48163 572 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 BMS1Q14692 1282 aaKnown RBP10.13□□□□□ -0.79
BDNF-204ENST00000395980 EDC3Q96F86 508 aaKnown RBP10.13□□□□□ -0.79
BDNF-204ENST00000395980 SPEF2Q9C093 1822 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 YEATS4O95619 227 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 CEBPZQ03701 1054 aaKnown RBP10.13□□□□□ -0.79
BDNF-204ENST00000395980 CCDC93Q567U6 631 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 E4F1Q66K89 784 aaPredicted RBP10.13□□□□□ -0.79
BDNF-204ENST00000395980 THEMISQ8N1K5 641 aaPredicted RBP10.13□□□□□ -0.79
BDNF-204ENST00000395980 EVCP57679 992 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 PTPN12Q05209 780 aaKnown RBP10.13□□□□□ -0.79
BDNF-204ENST00000395980 C14orf37Q86TY3 774 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 KCNG4Q8TDN1 519 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 PPP1R13BQ96KQ4 1090 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 TRMT1Q9NXH9 659 aaKnown RBP10.13□□□□□ -0.79
BDNF-204ENST00000395980 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 CARMIL3Q8ND23 1372 aa10.13□□□□□ -0.79
BDNF-204ENST00000395980 C5P01031 1676 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 SFPQP23246 707 aaKnown RBP eCLIP10.12□□□□□ -0.79
BDNF-204ENST00000395980 ZRSR1Q15695 479 aaKnown RBP10.12□□□□□ -0.79
BDNF-204ENST00000395980 EPHA10Q5JZY3 1008 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 ILDR1Q86SU0 546 aaPredicted RBP10.12□□□□□ -0.79
BDNF-204ENST00000395980 PCDHA7Q9UN72 937 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 KIF13AQ9H1H9 1805 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 KCNA6P17658 529 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 TFCP2Q12800 502 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 SDF4Q9BRK5 362 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 FTOQ9C0B1 505 aaKnown RBP eCLIP10.12□□□□□ -0.79
BDNF-204ENST00000395980 POLR3EQ9NVU0 708 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 IGSF3O75054 1194 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 CCDC129Q6ZRS4 1044 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 KLHDC4Q8TBB5 520 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 SRRTQ9BXP5 876 aaKnown RBP10.12□□□□□ -0.79
BDNF-204ENST00000395980 PHLPP2Q6ZVD8 1323 aa10.12□□□□□ -0.79
BDNF-204ENST00000395980 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 APOBRQ0VD83 1088 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 LRRC59Q96AG4 307 aaKnown RBP10.11□□□□□ -0.79
BDNF-204ENST00000395980 GPR108Q9NPR9 543 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 TMEM94Q12767 1356 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 IKBKBO14920 756 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 NLRP12P59046 1061 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 AIMP1Q12904 312 aaKnown RBP10.11□□□□□ -0.79
BDNF-204ENST00000395980 ZMYM1Q5SVZ6 1142 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 BRAPQ7Z569 592 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 LINC00301Q8NCQ3 95 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.11□□□□□ -0.79
BDNF-204ENST00000395980 MYO1BO43795 1136 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 PDIA3P30101 505 aaKnown RBP10.11□□□□□ -0.79
BDNF-204ENST00000395980 ARMCX5Q6P1M9 558 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
BDNF-204ENST00000395980 DNAJC2Q99543 621 aaKnown RBP10.11□□□□□ -0.79
BDNF-204ENST00000395980 DBNDD2Q9BQY9 259 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 LRRC2Q9BYS8 371 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 XPO4Q9C0E2 1151 aaKnown RBP10.11□□□□□ -0.79
BDNF-204ENST00000395980 PODXL2Q9NZ53 605 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 NEDD4P46934 1319 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 AFDNP55196 1824 aaKnown RBP10.11□□□□□ -0.79
BDNF-204ENST00000395980 SETD1BQ9UPS6 1966 aaKnown RBP10.11□□□□□ -0.79
BDNF-204ENST00000395980 SCN11AQ9UI33 1791 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 ARHGEF25Q86VW2 580 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 MYD88Q99836 296 aa10.11□□□□□ -0.79
BDNF-204ENST00000395980 TMC6Q7Z403 805 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 FCHSD1Q86WN1 690 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 XAGE3Q8WTP9 111 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 ZNF446Q9NWS9 450 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 E7EWF7 191 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 STK38Q15208 465 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 ARGLU1Q9NWB6 273 aaPredicted RBP10.1□□□□□ -0.79
BDNF-204ENST00000395980 IFNKQ9P0W0 207 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.1□□□□□ -0.79
BDNF-204ENST00000395980 V9GYY5 206 aaPredicted RBP10.1□□□□□ -0.79
BDNF-204ENST00000395980 PLEKHG2Q9H7P9 1386 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 ATP8B1O43520 1251 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 SMC2O95347 1197 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 SLC3A2P08195 630 aaKnown RBP10.1□□□□□ -0.79
BDNF-204ENST00000395980 TPM1P09493 284 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 ETF1P62495 437 aaKnown RBP10.1□□□□□ -0.79
BDNF-204ENST00000395980 DPCR1Q3MIW9 517 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 ZNF790Q6PG37 636 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 CALCOCO1Q9P1Z2 691 aa10.1□□□□□ -0.79
BDNF-204ENST00000395980 DHX16O60231 1041 aaKnown RBP10.09□□□□□ -0.79
BDNF-204ENST00000395980 NDUFA8P51970 172 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 CBFA2T2O43439 604 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 CCT2P78371 535 aaKnown RBP10.09□□□□□ -0.79
BDNF-204ENST00000395980 NCAPHQ15003 741 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 SF3A1Q15459 793 aaKnown RBP10.09□□□□□ -0.79
BDNF-204ENST00000395980 SYT10Q6XYQ8 523 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
BDNF-204ENST00000395980 DDX46Q7L014 1031 aaKnown RBP10.09□□□□□ -0.79
BDNF-204ENST00000395980 PAG1Q9NWQ8 432 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms