RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 KCNF1Q9H3M0 494 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 SPATS2LQ9NUQ6 558 aaKnown RBP10.39□□□□□ -0.75
MSH5-205ENST00000395853 ZNF215Q9UL58 517 aaPredicted RBP10.39□□□□□ -0.75
MSH5-205ENST00000395853 KIF2AO00139 706 aaPredicted RBP10.39□□□□□ -0.75
MSH5-205ENST00000395853 SGSM2O43147 1006 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 ZBTB7AO95365 584 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 MBD3O95983 291 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 HMOX1P09601 288 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 ELF1P32519 619 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 MYBPC2Q14324 1141 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 RRS1Q15050 365 aaKnown RBP10.39□□□□□ -0.75
MSH5-205ENST00000395853 MAF1Q9H063 256 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 EXOC4Q96A65 974 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 COG3Q96JB2 828 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 VEZTQ9HBM0 779 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 COG6Q9Y2V7 657 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 H2AFXP16104 143 aaPredicted RBP10.38□□□□□ -0.75
MSH5-205ENST00000395853 PRKAR2BP31323 418 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 PDE3AQ14432 1141 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 NEDD9Q14511 834 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 PDCD2Q16342 344 aaPredicted RBP10.38□□□□□ -0.75
MSH5-205ENST00000395853 ARHGEF25Q86VW2 580 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 EXOC8Q8IYI6 725 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 FHDC1Q9C0D6 1143 aaPredicted RBP10.38□□□□□ -0.75
MSH5-205ENST00000395853 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
MSH5-205ENST00000395853 EXOC5O00471 708 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 FCHSD2O94868 740 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 GCFC2P16383 781 aaKnown RBP10.37□□□□□ -0.75
MSH5-205ENST00000395853 RPS6KA3P51812 740 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 RBBP5Q15291 538 aaKnown RBP10.37□□□□□ -0.75
MSH5-205ENST00000395853 RPUSD2Q8IZ73 545 aaKnown RBP10.37□□□□□ -0.75
MSH5-205ENST00000395853 PHACTR3Q96KR7 559 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 KIF2CQ99661 725 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 EXOC6BQ9Y2D4 811 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 NHSQ6T4R5 1651 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 RLBP1P12271 317 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 IL13P35225 146 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 EXOSC9Q06265 439 aaKnown RBP10.37□□□□□ -0.75
MSH5-205ENST00000395853 GRIK3Q13003 919 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 NFXL1Q6ZNB6 911 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 TADA2BQ86TJ2 420 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 SYAP1Q96A49 352 aaPredicted RBP10.37□□□□□ -0.75
MSH5-205ENST00000395853 CLUAP1Q96AJ1 413 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 CHCHD3Q9NX63 227 aaKnown RBP10.37□□□□□ -0.75
MSH5-205ENST00000395853 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.37□□□□□ -0.75
MSH5-205ENST00000395853 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
MSH5-205ENST00000395853 PIK3C2AO00443 1686 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 TNS2Q63HR2 1409 aa10.37□□□□□ -0.75
MSH5-205ENST00000395853 LMAN1P49257 510 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 TBC1D25Q3MII6 688 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 PIAS4Q8N2W9 510 aaPredicted RBP10.36□□□□□ -0.75
MSH5-205ENST00000395853 ATL2Q8NHH9 583 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 A1CFQ9NQ94 594 aaKnown RBP10.36□□□□□ -0.75
MSH5-205ENST00000395853 PAPPAQ13219 1627 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 TTC21AQ8NDW8 1320 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 ICA1Q05084 483 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 HDGFL1Q5TGJ6 251 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 ANKRD45Q5TZF3 282 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 PTF1AQ7RTS3 328 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 ARMC2Q8NEN0 867 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 SRRTQ9BXP5 876 aaKnown RBP10.36□□□□□ -0.75
MSH5-205ENST00000395853 PDGFDQ9GZP0 370 aaPredicted RBP10.36□□□□□ -0.75
MSH5-205ENST00000395853 RMI1Q9H9A7 625 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 NUB1Q9Y5A7 615 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 TTC21BQ7Z4L5 1316 aa10.36□□□□□ -0.75
MSH5-205ENST00000395853 TPD52L2O43399 206 aaKnown RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 MFSD4BQ5TF39 518 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 FAM177A1Q8N128 213 aaPredicted RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 KCNB2Q92953 911 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 TMX4Q9H1E5 349 aaPredicted RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 PDRG1Q9NUG6 133 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 IL16Q14005 1332 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 QSER1Q2KHR3 1735 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 CCNHP51946 323 aaPredicted RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 CRYMQ14894 314 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 AMOTQ4VCS5 1084 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 NUTM1Q86Y26 1132 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 REXO1L1PQ8IX06 675 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 SLC16A10Q8TF71 515 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 PCDHGA4Q9Y5G9 962 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 A0A087WUV0 522 aaPredicted RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 AP1G2O75843 785 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 CLCN6P51797 869 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 SLC5A9Q2M3M2 681 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 DRAXINQ8NBI3 349 aaPredicted RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 CTCFLQ8NI51 663 aaPredicted RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 ZNF396Q96N95 335 aaPredicted RBP10.35□□□□□ -0.75
MSH5-205ENST00000395853 PDZRN3Q9UPQ7 1066 aa10.35□□□□□ -0.75
MSH5-205ENST00000395853 COL24A1Q17RW2 1714 aa10.34□□□□□ -0.75
MSH5-205ENST00000395853 CYP2E1P05181 493 aaPredicted RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 OAS2P29728 719 aaKnown RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 NAP1L1P55209 391 aaKnown RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 CEP135Q66GS9 1140 aa10.34□□□□□ -0.75
MSH5-205ENST00000395853 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
MSH5-205ENST00000395853 UBXN6Q9BZV1 441 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms