RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RBL2Q08999 1139 aa7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 GIMAP6Q6P9H5 292 aa7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 DTHD1Q6ZMT9 781 aa7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 GTPBP3Q969Y2 492 aaKnown RBP7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 RHOVQ96L33 236 aa7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 TMEM74Q96NL1 305 aa7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
HMGB1P10-201ENST00000395823 ZBTB42B2RXF5 422 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 GARTP22102 1010 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 ITGA6P23229 1130 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 NRLP54845 237 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 MAP3K11Q16584 847 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 TPTE2Q6XPS3 522 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 SV2BQ7L1I2 683 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 KIAA0825Q8IV33 1275 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 PHC3Q8NDX5 983 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 NXPE3Q969Y0 559 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 SPATA32Q96LK8 384 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 SPON2Q9BUD6 331 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 EFCC1Q9HA90 598 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 KCNQ5Q9NR82 932 aa7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P10-201ENST00000395823 MINDY4BA8MYZ0 360 aa7.68□□□□□ -1.18
HMGB1P10-201ENST00000395823 ENC1O14682 589 aa7.68□□□□□ -1.18
HMGB1P10-201ENST00000395823 GBP2P32456 591 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P10-201ENST00000395823 GPLD1P80108 840 aa7.68□□□□□ -1.18
HMGB1P10-201ENST00000395823 FAM182BQ5T319 152 aa7.68□□□□□ -1.18
HMGB1P10-201ENST00000395823 TRPM4Q8TD43 1214 aa7.68□□□□□ -1.18
HMGB1P10-201ENST00000395823 EAF1Q96JC9 268 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P10-201ENST00000395823 FGFR3P22607 806 aa7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 EIF4A3P38919 411 aaKnown RBP7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 LIG3P49916 1009 aa7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 ATP11AP98196 1134 aa7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 CTBSQ01459 385 aa7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 MLLT1Q03111 559 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 FAAP100Q0VG06 881 aa7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 FBXL19Q6PCT2 694 aa7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 TMEM102Q8N9M5 508 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 ZNF296Q8WUU4 475 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 RASSF4Q9H2L5 321 aa7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 TLR6Q9Y2C9 796 aa7.67□□□□□ -1.18
HMGB1P10-201ENST00000395823 J3QW42 95 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 PAGE1O75459 146 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 PWP1Q13610 501 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 CCDC144BQ3MJ40 725 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 ADAMTSL4Q6UY14 1074 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 VPS37DQ86XT2 251 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 RELL1Q8IUW5 271 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 GMCL1Q96IK5 515 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 TRIM47Q96LD4 638 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 ZNF576Q9H609 170 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 PIF1Q9H611 641 aa7.66□□□□□ -1.18
HMGB1P10-201ENST00000395823 A0A096LPE4 126 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 LOC102724428A0A0B4J2F2 783 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 A0A1W2PPZ6 126 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 PDE2AO00408 941 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 GREM1O60565 184 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 PF4P02776 101 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 SIK1P57059 783 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 FAM160A1Q05DH4 1040 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 HFE2Q6ZVN8 426 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 PMFBP1Q8TBY8 1022 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 SEC16BQ96JE7 1060 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 NECAB3Q96P71 396 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 PBX4Q9BYU1 374 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 CEP44Q9C0F1 390 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 SEC31BQ9NQW1 1179 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 GINM1Q9NU53 330 aa7.65□□□□□ -1.18
HMGB1P10-201ENST00000395823 CADPSQ9ULU8 1353 aa7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 GPR25O00155 361 aa7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 C2CD2LO14523 706 aa7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 TFE3P19532 575 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 NASPP49321 788 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 RASIP1Q5U651 963 aa7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 POP1Q99575 1024 aaKnown RBP7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 MUC3BQ9H195 1237 aa7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 DNAJB12Q9NXW2 375 aaKnown RBP7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 EFR3BQ9Y2G0 817 aa7.64□□□□□ -1.19
HMGB1P10-201ENST00000395823 RLBP1P12271 317 aa7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 CRKP46108 304 aa7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 SOX9P48436 509 aa7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 CAMK2GQ13555 558 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 RPS26P11Q5JNZ5 115 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 AGMOQ6ZNB7 445 aa7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 ASAP3Q8TDY4 903 aa7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 PUS7Q96PZ0 661 aaKnown RBP7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 NT5C1AQ9BXI3 368 aa7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 UBP1Q9NZI7 540 aa7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 GMPR2Q9P2T1 348 aaKnown RBP7.63□□□□□ -1.19
HMGB1P10-201ENST00000395823 STK10O94804 968 aaKnown RBP7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 LMNB2Q03252 620 aa7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 ZNF468Q5VIY5 522 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 TTBK2Q6IQ55 1244 aa7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 SYT9Q86SS6 491 aa7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 NOP9Q86U38 636 aaKnown RBP7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 KIFC2Q96AC6 838 aa7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 SPACA7Q96KW9 195 aa7.62□□□□□ -1.19
HMGB1P10-201ENST00000395823 HIRIP3Q9BW71 556 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms