RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 MLLT1Q03111 559 aaPredicted RBP8.71□□□□□ -1.02
CDKN3-203ENST00000395577 CCDC85BQ15834 202 aaPredicted RBP8.71□□□□□ -1.02
CDKN3-203ENST00000395577 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
CDKN3-203ENST00000395577 SV2AQ7L0J3 742 aa8.71□□□□□ -1.02
CDKN3-203ENST00000395577 UBXN4Q92575 508 aa8.71□□□□□ -1.02
CDKN3-203ENST00000395577 C11orf95C9JLR9 678 aaPredicted RBP8.7□□□□□ -1.02
CDKN3-203ENST00000395577 GRIA4P48058 902 aa8.7□□□□□ -1.02
CDKN3-203ENST00000395577 TBC1D8BQ0IIM8 1120 aa8.7□□□□□ -1.02
CDKN3-203ENST00000395577 SYT9Q86SS6 491 aa8.7□□□□□ -1.02
CDKN3-203ENST00000395577 HHIPQ96QV1 700 aa8.7□□□□□ -1.02
CDKN3-203ENST00000395577 UBE2OQ9C0C9 1292 aaKnown RBP8.7□□□□□ -1.02
CDKN3-203ENST00000395577 ZFYVE1Q9HBF4 777 aa8.7□□□□□ -1.02
CDKN3-203ENST00000395577 METTL12A8MUP2 240 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 NFKBIEO00221 500 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 FBXO24O75426 580 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 GHRHP01286 108 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 BMP4P12644 408 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 PCSK7Q16549 785 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 SPRED3Q2MJR0 410 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 RELL1Q8IUW5 271 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 TMEM102Q8N9M5 508 aaPredicted RBP8.69□□□□□ -1.02
CDKN3-203ENST00000395577 ANKRD24Q8TF21 1146 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 NXPE3Q969Y0 559 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 RSRP1Q9BUV0 290 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 PBX4Q9BYU1 374 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 BHLHE41Q9C0J9 482 aaPredicted RBP8.69□□□□□ -1.02
CDKN3-203ENST00000395577 RASSF4Q9H2L5 321 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 KBTBD4Q9NVX7 518 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 DNAJB12Q9NXW2 375 aaKnown RBP8.69□□□□□ -1.02
CDKN3-203ENST00000395577 PRKAG2Q9UGJ0 569 aa8.69□□□□□ -1.02
CDKN3-203ENST00000395577 PDE2AO00408 941 aaPredicted RBP8.68□□□□□ -1.02
CDKN3-203ENST00000395577 DNAJA1P31689 397 aaKnown RBP8.68□□□□□ -1.02
CDKN3-203ENST00000395577 ATP11AP98196 1134 aa8.68□□□□□ -1.02
CDKN3-203ENST00000395577 MAP3K10Q02779 954 aa8.68□□□□□ -1.02
CDKN3-203ENST00000395577 PWP1Q13610 501 aa8.68□□□□□ -1.02
CDKN3-203ENST00000395577 ZNF468Q5VIY5 522 aaPredicted RBP8.68□□□□□ -1.02
CDKN3-203ENST00000395577 TPTE2Q6XPS3 522 aa8.68□□□□□ -1.02
CDKN3-203ENST00000395577 ASAP3Q8TDY4 903 aa8.68□□□□□ -1.02
CDKN3-203ENST00000395577 RBSNQ9H1K0 784 aa8.68□□□□□ -1.02
CDKN3-203ENST00000395577 A0A096LPE4 126 aa8.67□□□□□ -1.02
CDKN3-203ENST00000395577 A0A1W2PPZ6 126 aa8.67□□□□□ -1.02
CDKN3-203ENST00000395577 C2CD2LO14523 706 aa8.67□□□□□ -1.02
CDKN3-203ENST00000395577 SIN3BO75182 1162 aa8.67□□□□□ -1.02
CDKN3-203ENST00000395577 EIF2AK2P19525 551 aaKnown RBP8.67□□□□□ -1.02
CDKN3-203ENST00000395577 ITPKAP23677 461 aa8.67□□□□□ -1.02
CDKN3-203ENST00000395577 PCBP4P57723 403 aaKnown RBP8.67□□□□□ -1.02
CDKN3-203ENST00000395577 SV2BQ7L1I2 683 aa8.67□□□□□ -1.02
CDKN3-203ENST00000395577 NANOS1Q8WY41 292 aaKnown RBP8.67□□□□□ -1.02
CDKN3-203ENST00000395577 TRIM56Q9BRZ2 755 aaKnown RBP8.67□□□□□ -1.02
CDKN3-203ENST00000395577 F6X3S4 739 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 RLBP1P12271 317 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 ATP2B1P20020 1258 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 ARID5AQ03989 594 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 PAK2Q13177 524 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 VPS37DQ86XT2 251 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 GMLQ99445 158 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 CEP44Q9C0F1 390 aa8.66□□□□□ -1.02
CDKN3-203ENST00000395577 MINDY4BA8MYZ0 360 aa8.65□□□□□ -1.02
CDKN3-203ENST00000395577 GBP2P32456 591 aaPredicted RBP8.65□□□□□ -1.02
CDKN3-203ENST00000395577 CEP135Q66GS9 1140 aa8.65□□□□□ -1.02
CDKN3-203ENST00000395577 TMEM74Q96NL1 305 aa8.65□□□□□ -1.02
CDKN3-203ENST00000395577 SPON2Q9BUD6 331 aa8.65□□□□□ -1.02
CDKN3-203ENST00000395577 ZNF576Q9H609 170 aa8.65□□□□□ -1.02
CDKN3-203ENST00000395577 SMNDC1O75940 238 aaKnown RBP eCLIP8.64□□□□□ -1.03
CDKN3-203ENST00000395577 CELA3AP09093 270 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 CPB1P15086 417 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 MX2P20592 715 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 GJA8P48165 433 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 RPS26P11Q5JNZ5 115 aaPredicted RBP8.64□□□□□ -1.03
CDKN3-203ENST00000395577 Q6ZNB5 142 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 MICALL1Q8N3F8 863 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 GPRASP2Q96D09 838 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 POP1Q99575 1024 aaKnown RBP8.64□□□□□ -1.03
CDKN3-203ENST00000395577 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
CDKN3-203ENST00000395577 SEC31BQ9NQW1 1179 aa8.64□□□□□ -1.03
CDKN3-203ENST00000395577 LIG3P49916 1009 aa8.63□□□□□ -1.03
CDKN3-203ENST00000395577 KIAA0825Q8IV33 1275 aa8.63□□□□□ -1.03
CDKN3-203ENST00000395577 DHX38Q92620 1227 aaKnown RBP8.63□□□□□ -1.03
CDKN3-203ENST00000395577 TNFRSF25Q93038 417 aa8.63□□□□□ -1.03
CDKN3-203ENST00000395577 NECAB3Q96P71 396 aaPredicted RBP8.63□□□□□ -1.03
CDKN3-203ENST00000395577 GPN3Q9UHW5 284 aaPredicted RBP8.63□□□□□ -1.03
CDKN3-203ENST00000395577 SLC6A14Q9UN76 642 aa8.63□□□□□ -1.03
CDKN3-203ENST00000395577 GTF2F1P35269 517 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDKN3-203ENST00000395577 EIF4A3P38919 411 aaKnown RBP8.62□□□□□ -1.03
CDKN3-203ENST00000395577 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
CDKN3-203ENST00000395577 PLD4Q96BZ4 506 aa8.62□□□□□ -1.03
CDKN3-203ENST00000395577 MUC3BQ9H195 1237 aa8.62□□□□□ -1.03
CDKN3-203ENST00000395577 ADAMTS1Q9UHI8 967 aa8.62□□□□□ -1.03
CDKN3-203ENST00000395577 KLF15Q9UIH9 416 aa8.62□□□□□ -1.03
CDKN3-203ENST00000395577 ENC1O14682 589 aa8.61□□□□□ -1.03
CDKN3-203ENST00000395577 ARAFP10398 606 aa8.61□□□□□ -1.03
CDKN3-203ENST00000395577 ADH6P28332 368 aa8.61□□□□□ -1.03
CDKN3-203ENST00000395577 ADH7P40394 386 aa8.61□□□□□ -1.03
CDKN3-203ENST00000395577 PERM1Q5SV97 790 aa8.61□□□□□ -1.03
CDKN3-203ENST00000395577 ELMSAN1Q6PJG2 1045 aa8.61□□□□□ -1.03
CDKN3-203ENST00000395577 PHC3Q8NDX5 983 aa8.61□□□□□ -1.03
CDKN3-203ENST00000395577 BSNDQ8WZ55 320 aa8.61□□□□□ -1.03
CDKN3-203ENST00000395577 TLR6Q9Y2C9 796 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms