RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 MYH13Q9UKX3 1938 aa16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 GNAI3P08754 354 aa16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 GMPSP49915 693 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 EAPPQ56P03 285 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 TXNRD3Q86VQ6 643 aa16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 COA1Q9GZY4 146 aa16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 KCNQ5Q9NR82 932 aa16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
HLA-DMA-202ENST00000395303 TMEM88BA6NKF7 163 aa16.73■□□□□ 0.27
HLA-DMA-202ENST00000395303 TAF5LO75529 589 aa16.73■□□□□ 0.27
HLA-DMA-202ENST00000395303 RPS12P25398 132 aaKnown RBP16.73■□□□□ 0.27
HLA-DMA-202ENST00000395303 CLUAP1Q96AJ1 413 aa16.73■□□□□ 0.27
HLA-DMA-202ENST00000395303 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
HLA-DMA-202ENST00000395303 MROH5Q6ZUA9 1318 aa16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 G3V3G9 751 aa16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 FOXN1O15353 648 aa16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 VEGFBP49765 207 aa16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 PTPN12Q05209 780 aaKnown RBP16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 UBE4AQ14139 1066 aa16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 DCAF8Q5TAQ9 597 aa16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 USP50Q70EL3 339 aaPredicted RBP16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 TMEM57Q8N5G2 664 aa16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 HELBQ8NG08 1087 aaPredicted RBP16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 ADARB2Q9NS39 739 aaKnown RBP16.72■□□□□ 0.27
HLA-DMA-202ENST00000395303 ARAP2Q8WZ64 1704 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 SNAP23O00161 211 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 KLRK1P26718 216 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 KCNJ4P48050 445 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 MTX1Q13505 466 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 LRRC24Q50LG9 513 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 MAP1SQ66K74 1059 aaPredicted RBP16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 VGLL2Q8N8G2 317 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 GMLQ99445 158 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 FBXO3Q9UK99 471 aa16.71■□□□□ 0.27
HLA-DMA-202ENST00000395303 RLBP1P12271 317 aa16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 AGBL3Q8NEM8 1001 aa16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 CNOT7Q9UIV1 285 aaKnown RBP16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 CLEC11AQ9Y240 323 aa16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 ECM29Q5VYK3 1845 aa16.7■□□□□ 0.26
HLA-DMA-202ENST00000395303 USP17L3A6NCW0 530 aa16.69■□□□□ 0.26
HLA-DMA-202ENST00000395303 USP17L4A6NCW7 530 aa16.69■□□□□ 0.26
HLA-DMA-202ENST00000395303 RASSF10A6NK89 507 aa16.69■□□□□ 0.26
HLA-DMA-202ENST00000395303 EYA2O00167 538 aa16.69■□□□□ 0.26
HLA-DMA-202ENST00000395303 RSBN1LQ6PCB5 846 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-202ENST00000395303 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
HLA-DMA-202ENST00000395303 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
HLA-DMA-202ENST00000395303 THSD7BQ9C0I4 1608 aa16.68■□□□□ 0.26
HLA-DMA-202ENST00000395303 H7C1D1 291 aa16.68■□□□□ 0.26
HLA-DMA-202ENST00000395303 IL1R1P14778 569 aa16.68■□□□□ 0.26
HLA-DMA-202ENST00000395303 DACT2Q5SW24 774 aa16.68■□□□□ 0.26
HLA-DMA-202ENST00000395303 STRIP1Q5VSL9 837 aa16.68■□□□□ 0.26
HLA-DMA-202ENST00000395303 ATG9AQ7Z3C6 839 aa16.68■□□□□ 0.26
HLA-DMA-202ENST00000395303 MICALL2Q8IY33 904 aa16.68■□□□□ 0.26
HLA-DMA-202ENST00000395303 COPRSQ9NQ92 184 aa16.68■□□□□ 0.26
HLA-DMA-202ENST00000395303 SHTN1A0MZ66 631 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 PLIN1O60240 522 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 CIAO1O76071 339 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 PDE8BO95263 885 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 GNAI2P04899 355 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 ZNF280AP59817 542 aaPredicted RBP16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 FTSJ3Q8IY81 847 aaKnown RBP16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 WBP1LQ9NX94 342 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 RCAN3Q9UKA8 241 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 MYO3BQ8WXR4 1341 aa16.67■□□□□ 0.26
HLA-DMA-202ENST00000395303 ZBTB7BO15156 539 aaPredicted RBP16.66■□□□□ 0.26
HLA-DMA-202ENST00000395303 MS4A1P11836 297 aa16.66■□□□□ 0.26
HLA-DMA-202ENST00000395303 FGFR2P21802 821 aa16.66■□□□□ 0.26
HLA-DMA-202ENST00000395303 MMP14P50281 582 aa16.66■□□□□ 0.26
HLA-DMA-202ENST00000395303 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
HLA-DMA-202ENST00000395303 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
HLA-DMA-202ENST00000395303 ZNF804AQ7Z570 1209 aa16.66■□□□□ 0.26
HLA-DMA-202ENST00000395303 TRPM4Q8TD43 1214 aa16.66■□□□□ 0.26
HLA-DMA-202ENST00000395303 FMR1Q06787 632 aaKnown RBP eCLIP16.65■□□□□ 0.26
HLA-DMA-202ENST00000395303 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
HLA-DMA-202ENST00000395303 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
HLA-DMA-202ENST00000395303 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
HLA-DMA-202ENST00000395303 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
HLA-DMA-202ENST00000395303 DEFB115Q30KQ5 88 aa16.64■□□□□ 0.25
HLA-DMA-202ENST00000395303 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
HLA-DMA-202ENST00000395303 FBXO33Q7Z6M2 555 aa16.64■□□□□ 0.25
HLA-DMA-202ENST00000395303 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
HLA-DMA-202ENST00000395303 SRGAP3O43295 1099 aa16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 EGFRP00533 1210 aa16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 HIBADHP31937 336 aaKnown RBP16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 GTF2IP78347 998 aa16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 PUM3Q15397 648 aaKnown RBP16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 ITPRIPQ8IWB1 547 aa16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 PA2G4Q9UQ80 394 aaKnown RBP16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 FAM205AQ6ZU69 1335 aa16.63■□□□□ 0.25
HLA-DMA-202ENST00000395303 USP17L8P0C7I0 530 aa16.62■□□□□ 0.25
HLA-DMA-202ENST00000395303 IL15P40933 162 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms