RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 VPS37CA5D8V6 355 aaPredicted RBP16.58■□□□□ 0.24
SNCA-204ENST00000394989 DNM1Q05193 864 aaKnown RBP16.58■□□□□ 0.24
SNCA-204ENST00000394989 ATP2B3Q16720 1220 aa16.58■□□□□ 0.24
SNCA-204ENST00000394989 RREB1Q92766 1687 aa16.58■□□□□ 0.24
SNCA-204ENST00000394989 MYH14Q7Z406 1995 aaKnown RBP16.58■□□□□ 0.24
SNCA-204ENST00000394989 LRP5O75197 1615 aa16.57■□□□□ 0.24
SNCA-204ENST00000394989 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
SNCA-204ENST00000394989 LARP1BQ659C4 914 aaKnown RBP16.57■□□□□ 0.24
SNCA-204ENST00000394989 CDC37L1Q7L3B6 337 aa16.57■□□□□ 0.24
SNCA-204ENST00000394989 GTF3C6Q969F1 213 aa16.57■□□□□ 0.24
SNCA-204ENST00000394989 PDE8AO60658 829 aa16.57■□□□□ 0.24
SNCA-204ENST00000394989 CRKLP46109 303 aaKnown RBP16.57■□□□□ 0.24
SNCA-204ENST00000394989 ITPK1Q13572 414 aa16.57■□□□□ 0.24
SNCA-204ENST00000394989 MCAMP43121 646 aa16.57■□□□□ 0.24
SNCA-204ENST00000394989 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 ATP6V1DQ9Y5K8 247 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 MYH7P12883 1935 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 A0A0G2JS52 829 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
SNCA-204ENST00000394989 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
SNCA-204ENST00000394989 FIBPO43427 364 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
SNCA-204ENST00000394989 BRF1Q92994 677 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 CNNM1Q9NRU3 951 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 CCDC87Q9NVE4 849 aa16.56■□□□□ 0.24
SNCA-204ENST00000394989 CICQ96RK0 1608 aaPredicted RBP16.55■□□□□ 0.24
SNCA-204ENST00000394989 LOC102724428A0A0B4J2F2 783 aa16.55■□□□□ 0.24
SNCA-204ENST00000394989 JAK2O60674 1132 aa16.55■□□□□ 0.24
SNCA-204ENST00000394989 SIK1P57059 783 aa16.55■□□□□ 0.24
SNCA-204ENST00000394989 EXOSC10Q01780 885 aaKnown RBP16.55■□□□□ 0.24
SNCA-204ENST00000394989 SUSD4Q5VX71 490 aa16.55■□□□□ 0.24
SNCA-204ENST00000394989 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
SNCA-204ENST00000394989 E7EWF7 191 aa16.55■□□□□ 0.24
SNCA-204ENST00000394989 PUS7LQ9H0K6 701 aaKnown RBP16.55■□□□□ 0.24
SNCA-204ENST00000394989 PDE8BO95263 885 aa16.54■□□□□ 0.24
SNCA-204ENST00000394989 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
SNCA-204ENST00000394989 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
SNCA-204ENST00000394989 MYO5AQ9Y4I1 1855 aaKnown RBP16.54■□□□□ 0.24
SNCA-204ENST00000394989 A0A0U1RQG5 324 aaPredicted RBP16.54■□□□□ 0.24
SNCA-204ENST00000394989 AGXT2Q9BYV1 514 aa16.54■□□□□ 0.24
SNCA-204ENST00000394989 UBE2HP62256 183 aa16.54■□□□□ 0.24
SNCA-204ENST00000394989 SCRN1Q12765 414 aa16.54■□□□□ 0.24
SNCA-204ENST00000394989 FERMT3Q86UX7 667 aa16.54■□□□□ 0.24
SNCA-204ENST00000394989 DDX60Q8IY21 1712 aaKnown RBP16.54■□□□□ 0.24
SNCA-204ENST00000394989 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
SNCA-204ENST00000394989 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
SNCA-204ENST00000394989 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
SNCA-204ENST00000394989 FAM173BQ6P4H8 233 aa16.53■□□□□ 0.24
SNCA-204ENST00000394989 KCNQ2O43526 872 aa16.53■□□□□ 0.24
SNCA-204ENST00000394989 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
SNCA-204ENST00000394989 ZFYP08048 801 aaPredicted RBP16.52■□□□□ 0.24
SNCA-204ENST00000394989 PDCP20941 246 aa16.52■□□□□ 0.24
SNCA-204ENST00000394989 BARGINQ6ZT62 677 aa16.52■□□□□ 0.24
SNCA-204ENST00000394989 ZNF512BQ96KM6 892 aaPredicted RBP16.52■□□□□ 0.24
SNCA-204ENST00000394989 R3HCC1Q9Y3T6 440 aaKnown RBP16.52■□□□□ 0.24
SNCA-204ENST00000394989 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.24
SNCA-204ENST00000394989 CCDC173Q0VFZ6 552 aa16.52■□□□□ 0.24
SNCA-204ENST00000394989 TPRNQ4KMQ1 711 aa16.52■□□□□ 0.24
SNCA-204ENST00000394989 ARAP2Q8WZ64 1704 aa16.52■□□□□ 0.23
SNCA-204ENST00000394989 FAM177BA6PVY3 158 aa16.52■□□□□ 0.23
SNCA-204ENST00000394989 APPBP2Q92624 585 aa16.52■□□□□ 0.23
SNCA-204ENST00000394989 SYAP1Q96A49 352 aaPredicted RBP16.52■□□□□ 0.23
SNCA-204ENST00000394989 APOBRQ0VD83 1088 aa16.51■□□□□ 0.23
SNCA-204ENST00000394989 CHST3Q7LGC8 479 aa16.51■□□□□ 0.23
SNCA-204ENST00000394989 HELBQ8NG08 1087 aaPredicted RBP16.51■□□□□ 0.23
SNCA-204ENST00000394989 COL5A3P25940 1745 aaPredicted RBP16.51■□□□□ 0.23
SNCA-204ENST00000394989 PFKFB2O60825 505 aa16.51■□□□□ 0.23
SNCA-204ENST00000394989 FGAP02671 866 aa16.51■□□□□ 0.23
SNCA-204ENST00000394989 PDIA4P13667 645 aaKnown RBP16.51■□□□□ 0.23
SNCA-204ENST00000394989 FGFR2P21802 821 aa16.51■□□□□ 0.23
SNCA-204ENST00000394989 PHKA1P46020 1223 aa16.51■□□□□ 0.23
SNCA-204ENST00000394989 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
SNCA-204ENST00000394989 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 PIP4K2BP78356 416 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 CCDC102BQ68D86 513 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 AK7Q96M32 723 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 SMARCC2Q8TAQ2 1214 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 PIH1D3Q9NQM4 214 aaKnown RBP16.5■□□□□ 0.23
SNCA-204ENST00000394989 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 COL4A1P02462 1669 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 SNAP23O00161 211 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 MSNP26038 577 aaKnown RBP16.5■□□□□ 0.23
SNCA-204ENST00000394989 HAND2P61296 217 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
SNCA-204ENST00000394989 GPAA1O43292 621 aa16.49■□□□□ 0.23
SNCA-204ENST00000394989 ARID4AP29374 1257 aaPredicted RBP16.49■□□□□ 0.23
SNCA-204ENST00000394989 ADD2P35612 726 aa16.49■□□□□ 0.23
SNCA-204ENST00000394989 FGD1P98174 961 aa16.49■□□□□ 0.23
SNCA-204ENST00000394989 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
SNCA-204ENST00000394989 NTSR2O95665 410 aa16.49■□□□□ 0.23
SNCA-204ENST00000394989 PUM3Q15397 648 aaKnown RBP16.49■□□□□ 0.23
SNCA-204ENST00000394989 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
SNCA-204ENST00000394989 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
SNCA-204ENST00000394989 MROH5Q6ZUA9 1318 aa16.49■□□□□ 0.23
SNCA-204ENST00000394989 CCDC183Q5T5S1 534 aa16.48■□□□□ 0.23
SNCA-204ENST00000394989 RNF214Q8ND24 703 aa16.48■□□□□ 0.23
SNCA-204ENST00000394989 NSUN7Q8NE18 718 aaKnown RBP16.48■□□□□ 0.23
SNCA-204ENST00000394989 LAMB2P55268 1798 aa16.48■□□□□ 0.23
SNCA-204ENST00000394989 ATRNO75882 1429 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms