RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 VWA3BQ502W6 1294 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 DNAJC21Q5F1R6 531 aaKnown RBP8.4□□□□□ -1.07
SYNE2-205ENST00000394768 LDHAL6AQ6ZMR3 332 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 FSIP1Q8NA03 581 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 KIFC2Q96AC6 838 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 HAUS8Q9BT25 410 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 NR1I2O75469 434 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 NLRP3Q96P20 1036 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 NACA2Q9H009 215 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 PICK1Q9NRD5 415 aa8.4□□□□□ -1.07
SYNE2-205ENST00000394768 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.4□□□□□ -1.07
SYNE2-205ENST00000394768 AKNAQ7Z591 1439 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 ANKRD2Q9GZV1 360 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 NCAPD3P42695 1498 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 SYCE3A1L190 88 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 E7EVH7 732 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 SARNPP82979 210 aaKnown RBP8.39□□□□□ -1.07
SYNE2-205ENST00000394768 CAMK4Q16566 473 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 MCM10Q7L590 875 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 PPFIA2O75334 1257 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 CCT6AP40227 531 aaKnown RBP8.39□□□□□ -1.07
SYNE2-205ENST00000394768 IFT74Q96LB3 600 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 PLCB4Q15147 1175 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 DNA2P51530 1060 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 FYB2Q5VWT5 728 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 STMN2Q93045 179 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 CCDC160A6NGH7 325 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 PLCB3Q01970 1234 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 SEL1L2Q5TEA6 688 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 UBE2HP62256 183 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 ZNF569Q5MCW4 686 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
SYNE2-205ENST00000394768 IVNS1ABPQ9Y6Y0 642 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 ERICH4A6NGS2 130 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 ATP6V1E1P36543 226 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 SAMD15Q9P1V8 674 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 FAM8A1Q9UBU6 413 aa8.39□□□□□ -1.07
SYNE2-205ENST00000394768 ESPNB1AK53 854 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 CASQ2O14958 399 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 UTP14CQ5TAP6 766 aaKnown RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 TRIM6Q9C030 488 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 BOLA2Q9H3K6 86 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 ARFGAP3Q9NP61 516 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 ORC3Q9UBD5 711 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 TRIML1Q8N9V2 468 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 TSR2Q969E8 191 aaKnown RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 IQGAP2Q13576 1575 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 NAIPQ13075 1403 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 KRT79Q5XKE5 535 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 NUF2Q9BZD4 464 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 ECHDC1Q9NTX5 307 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 CD2APQ9Y5K6 639 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 SNRPA1P09661 255 aaKnown RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 UVSSAQ2YD98 709 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 LIN9Q5TKA1 542 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 ATP2A3Q93084 1043 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 TNNC1P63316 161 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 XPCQ01831 940 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 TEX14Q8IWB6 1497 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 P4HA1P13674 534 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 PDE6BP35913 854 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 SYKP43405 635 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 NAPAP54920 295 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 LGSNQ5TDP6 509 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 HAUS3Q68CZ6 603 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 ARHGAP24Q8N264 748 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 TEKT1Q969V4 418 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 PAIP2Q9BPZ3 127 aaKnown RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 PNMA2Q9UL42 364 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 CTAGE15A4D2H0 777 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 CTAGE8P0CG41 777 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 ZC3H6P61129 1189 aaKnown RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 CTAGE6Q86UF2 777 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 CTAGE4Q8IX94 777 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 ZNF277Q9NRM2 450 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-205ENST00000394768 PPP1R7Q15435 360 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 NEK11Q8NG66 645 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 PARP3Q9Y6F1 533 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 RTN1Q16799 776 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 HVCN1Q96D96 273 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 IL1RAPL2Q9NP60 686 aa8.38□□□□□ -1.07
SYNE2-205ENST00000394768 EIF2AK4Q9P2K8 1649 aaKnown RBP8.37□□□□□ -1.07
SYNE2-205ENST00000394768 YWHAEP62258 255 aaKnown RBP8.37□□□□□ -1.07
SYNE2-205ENST00000394768 MICU3Q86XE3 530 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 ARHGEF10LQ9HCE6 1279 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 ZBTB43O43298 467 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 AGTPBP1Q9UPW5 1226 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 EIF4G3O43432 1585 aaKnown RBP8.37□□□□□ -1.07
SYNE2-205ENST00000394768 ERCC5P28715 1186 aaPredicted RBP8.37□□□□□ -1.07
SYNE2-205ENST00000394768 TMC6Q7Z403 805 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 CCDC26Q8TAB7 109 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 SEPT10Q9P0V9 454 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 UBL4BQ8N7F7 174 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 VAV2P52735 878 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 CACNA2D3Q8IZS8 1091 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 FNBP1Q96RU3 617 aa8.37□□□□□ -1.07
SYNE2-205ENST00000394768 FAM204AQ9H8W3 233 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms