RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	XAGE2	Q96GT9	111 aa		11.03	□□□□□ -0.64
MITF-205	ENST00000394348	ZNF594	Q96JF6	807 aa	Predicted RBP	11.03	□□□□□ -0.64
MITF-205	ENST00000394348	UTP14A	Q9BVJ6	771 aa	Known RBP	11.03	□□□□□ -0.64
MITF-205	ENST00000394348	PUS3	Q9BZE2	481 aa	Known RBP	11.03	□□□□□ -0.64
MITF-205	ENST00000394348	GREM2	Q9H772	168 aa		11.03	□□□□□ -0.64
MITF-205	ENST00000394348	MYH7	P12883	1935 aa		11.03	□□□□□ -0.64
MITF-205	ENST00000394348	WDR33	Q9C0J8	1336 aa	Known RBP	11.03	□□□□□ -0.64
MITF-205	ENST00000394348	ATRN	O75882	1429 aa		11.02	□□□□□ -0.64
MITF-205	ENST00000394348	RNF113A	O15541	343 aa	Known RBP	11.02	□□□□□ -0.65
MITF-205	ENST00000394348	HMGB1	P09429	215 aa	Known RBP	11.02	□□□□□ -0.65
MITF-205	ENST00000394348	TIMM10	P62072	90 aa		11.02	□□□□□ -0.65
MITF-205	ENST00000394348	ATP2B3	Q16720	1220 aa		11.02	□□□□□ -0.65
MITF-205	ENST00000394348	KLHL40	Q2TBA0	621 aa		11.02	□□□□□ -0.65
MITF-205	ENST00000394348	METTL24	Q5JXM2	366 aa		11.02	□□□□□ -0.65
MITF-205	ENST00000394348	TTC39A	Q5SRH9	613 aa		11.02	□□□□□ -0.65
MITF-205	ENST00000394348	RC3H1	Q5TC82	1133 aa	Known RBP	11.02	□□□□□ -0.65
MITF-205	ENST00000394348	BLOC1S2	Q6QNY1	142 aa		11.02	□□□□□ -0.65
MITF-205	ENST00000394348	LDHAL6A	Q6ZMR3	332 aa		11.02	□□□□□ -0.65
MITF-205	ENST00000394348	DDX46	Q7L014	1031 aa	Known RBP	11.02	□□□□□ -0.65
MITF-205	ENST00000394348	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.02	□□□□□ -0.65
MITF-205	ENST00000394348	TBC1D2B	Q9UPU7	963 aa		11.02	□□□□□ -0.65
MITF-205	ENST00000394348	COL24A1	Q17RW2	1714 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	BTAF1	O14981	1849 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	FSD2	A1L4K1	749 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	GOLIM4	O00461	696 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	ATMIN	O43313	823 aa	Predicted RBP	11.01	□□□□□ -0.65
MITF-205	ENST00000394348	UQCRFS1P1	P0C7P4	283 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	RPS6KB1	P23443	525 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	TIE1	P35590	1138 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	TTF1	Q15361	905 aa	Predicted RBP	11.01	□□□□□ -0.65
MITF-205	ENST00000394348	CCDC152	Q4G0S7	254 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	GORAB	Q5T7V8	394 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	ZSCAN25	Q6NSZ9	544 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.01	□□□□□ -0.65
MITF-205	ENST00000394348	EDC3	Q96F86	508 aa	Known RBP	11.01	□□□□□ -0.65
MITF-205	ENST00000394348	ACSBG1	Q96GR2	724 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	NGLY1	Q96IV0	654 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	ARX	Q96QS3	562 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	CNNM1	Q9NRU3	951 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	ZDHHC9	Q9Y397	364 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	LY75	O60449	1722 aa		11.01	□□□□□ -0.65
MITF-205	ENST00000394348	AKAP11	Q9UKA4	1901 aa		11	□□□□□ -0.65
MITF-205	ENST00000394348	PDE8B	O95263	885 aa		11	□□□□□ -0.65
MITF-205	ENST00000394348	NTSR2	O95665	410 aa		11	□□□□□ -0.65
MITF-205	ENST00000394348	ARID4A	P29374	1257 aa	Predicted RBP	11	□□□□□ -0.65
MITF-205	ENST00000394348	PUM3	Q15397	648 aa	Known RBP	11	□□□□□ -0.65
MITF-205	ENST00000394348	FAM98C	Q17RN3	349 aa	Known RBP	11	□□□□□ -0.65
MITF-205	ENST00000394348	ADCK5	Q3MIX3	580 aa		11	□□□□□ -0.65
MITF-205	ENST00000394348	SUSD4	Q5VX71	490 aa		11	□□□□□ -0.65
MITF-205	ENST00000394348	ASTL	Q6HA08	431 aa	Predicted RBP	11	□□□□□ -0.65
MITF-205	ENST00000394348	C8orf37	Q96NL8	207 aa		11	□□□□□ -0.65
MITF-205	ENST00000394348	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11	□□□□□ -0.65
MITF-205	ENST00000394348	FGFR2	P21802	821 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	PKP1	Q13835	747 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	LPIN2	Q92539	896 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	APPBP2	Q92624	585 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	CHMP4C	Q96CF2	233 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	CTNNA3	Q9UI47	895 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	SMC3	Q9UQE7	1217 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	ATP6V1D	Q9Y5K8	247 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	MAST3	O60307	1309 aa		10.99	□□□□□ -0.65
MITF-205	ENST00000394348	DOCK2	Q92608	1830 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	GOLGA6L3	A6NEY3	463 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	TTLL13P	A6NNM8	815 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	MBD3	O95983	291 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	SLC5A1	P13866	664 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	ADORA1	P30542	326 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	ATN1	P54259	1190 aa	Predicted RBP	10.98	□□□□□ -0.65
MITF-205	ENST00000394348	SYNE4	Q8N205	404 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	FBXL16	Q8N461	479 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	TMEM87A	Q8NBN3	555 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	NEK1	Q96PY6	1258 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	LMBRD1	Q9NUN5	540 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	USP21	Q9UK80	565 aa		10.98	□□□□□ -0.65
MITF-205	ENST00000394348	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
MITF-205	ENST00000394348	KCNQ2	O43526	872 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348	ONECUT3	O60422	494 aa	Predicted RBP	10.97	□□□□□ -0.65
MITF-205	ENST00000394348	CYP21A2	P08686	494 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348	HSPD1	P10809	573 aa	Known RBP	10.97	□□□□□ -0.65
MITF-205	ENST00000394348	PDC	P20941	246 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348	IGHMBP2	P38935	993 aa	Known RBP	10.97	□□□□□ -0.65
MITF-205	ENST00000394348	UBE3C	Q15386	1083 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348	MCTP1	Q6DN14	999 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348	NOL8	Q76FK4	1167 aa	Known RBP	10.97	□□□□□ -0.65
MITF-205	ENST00000394348	LINC00116	Q8NCU8	138 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348	CDC5L	Q99459	802 aa	Known RBP	10.97	□□□□□ -0.65
MITF-205	ENST00000394348	NYX	Q9GZU5	481 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348		A0A1B0GUL6	1792 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348	SBF2	Q86WG5	1849 aa		10.97	□□□□□ -0.65
MITF-205	ENST00000394348	LAMA4	Q16363	1823 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	TAF1L	Q8IZX4	1826 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	ZMYM6	O95789	1325 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	WDR19	Q8NEZ3	1342 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348		A0A0G2JS52	829 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	STX6	O43752	255 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	RPS6KA4	O75676	772 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	ZSCAN22	P10073	491 aa	Predicted RBP	10.96	□□□□□ -0.65
MITF-205	ENST00000394348	HMGB2	P26583	209 aa	Known RBP	10.96	□□□□□ -0.65
MITF-205	ENST00000394348	MRE11	P49959	708 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms