RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
SMAD1-202ENST00000394092 CTNNA3Q9UI47 895 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 CNPY2Q9Y2B0 182 aa8.53□□□□□ -1.04
SMAD1-202ENST00000394092 AKAP11Q9UKA4 1901 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 RIC1Q4ADV7 1423 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 ELP1O95163 1332 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 ERVV-1B6SEH8 477 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 POTEB2H3BUK9 544 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 FIBPO43427 364 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 CYP19A1P11511 503 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 IL6STP40189 918 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 TIMM10P62072 90 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 ST3GAL1Q11201 340 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 FOXD4L6Q3SYB3 417 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 FOXD4L3Q6VB84 417 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 NECAB1Q8N987 351 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 ZNF594Q96JF6 807 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 CHAMP1Q96JM3 812 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 AK7Q96M32 723 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 LLPHQ9BRT6 129 aaKnown RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 RBSNQ9H1K0 784 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 GDPD2Q9HCC8 539 aa8.52□□□□□ -1.05
SMAD1-202ENST00000394092 RRAGDQ9NQL2 400 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 NSFL1CQ9UNZ2 370 aaKnown RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 THRAP3Q9Y2W1 955 aaKnown RBP8.52□□□□□ -1.05
SMAD1-202ENST00000394092 DDX60Q8IY21 1712 aaKnown RBP8.51□□□□□ -1.05
SMAD1-202ENST00000394092 MAST3O60307 1309 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 ANKRD18BA2A2Z9 1011 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 CTSWP56202 376 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 HMGN5P82970 282 aaKnown RBP8.51□□□□□ -1.05
SMAD1-202ENST00000394092 TTF1Q15361 905 aaPredicted RBP8.51□□□□□ -1.05
SMAD1-202ENST00000394092 UVSSAQ2YD98 709 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 ZSCAN25Q6NSZ9 544 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 CCDC129Q6ZRS4 1044 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 Q6ZUG5 572 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 DHX32Q7L7V1 743 aaKnown RBP8.51□□□□□ -1.05
SMAD1-202ENST00000394092 NLRP10Q86W26 655 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 PDLIM2Q96JY6 352 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 SEC62Q99442 399 aaKnown RBP8.51□□□□□ -1.05
SMAD1-202ENST00000394092 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMAD1-202ENST00000394092 SCAND2PQ9GZW5 306 aaPredicted RBP8.51□□□□□ -1.05
SMAD1-202ENST00000394092 CCDC9Q9Y3X0 531 aaKnown RBP8.51□□□□□ -1.05
SMAD1-202ENST00000394092 NDUFB9Q9Y6M9 179 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 ZNF831Q5JPB2 1677 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 CHD4Q14839 1912 aa8.51□□□□□ -1.05
SMAD1-202ENST00000394092 DOCK2Q92608 1830 aa8.5□□□□□ -1.05
SMAD1-202ENST00000394092 PDE8AO60658 829 aa8.5□□□□□ -1.05
SMAD1-202ENST00000394092 GADD45BO75293 160 aaPredicted RBP8.5□□□□□ -1.05
SMAD1-202ENST00000394092 HSPD1P10809 573 aaKnown RBP8.5□□□□□ -1.05
SMAD1-202ENST00000394092 MSNP26038 577 aaKnown RBP8.5□□□□□ -1.05
SMAD1-202ENST00000394092 ATP2B3Q16720 1220 aa8.5□□□□□ -1.05
SMAD1-202ENST00000394092 METTL24Q5JXM2 366 aa8.5□□□□□ -1.05
SMAD1-202ENST00000394092 FAM89AQ96GI7 184 aa8.5□□□□□ -1.05
SMAD1-202ENST00000394092 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
SMAD1-202ENST00000394092 ZNF512BQ96KM6 892 aaPredicted RBP8.5□□□□□ -1.05
SMAD1-202ENST00000394092 PUS3Q9BZE2 481 aaKnown RBP8.5□□□□□ -1.05
SMAD1-202ENST00000394092 ZSCAN16Q9H4T2 348 aaPredicted RBP8.5□□□□□ -1.05
SMAD1-202ENST00000394092 ATRNO75882 1429 aa8.5□□□□□ -1.05
SMAD1-202ENST00000394092 BCORQ6W2J9 1755 aa8.5□□□□□ -1.05
SMAD1-202ENST00000394092 H3BQV1 296 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 IRS4O14654 1257 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-202ENST00000394092 PFKFB2O60825 505 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 ITGA6P23229 1130 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMAD1-202ENST00000394092 DNM1Q05193 864 aaKnown RBP8.49□□□□□ -1.05
SMAD1-202ENST00000394092 STK3Q13188 491 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 IMMTQ16891 758 aaKnown RBP8.49□□□□□ -1.05
SMAD1-202ENST00000394092 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 LDHAL6AQ6ZMR3 332 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 CDC37L1Q7L3B6 337 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 ZSCAN30Q86W11 494 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 DZIP3Q86Y13 1208 aaKnown RBP8.49□□□□□ -1.05
SMAD1-202ENST00000394092 APPBP2Q92624 585 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 SYTL4Q96C24 671 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-202ENST00000394092 TCEANC2Q96MN5 208 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 AGXT2Q9BYV1 514 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 CNNM1Q9NRU3 951 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 MROH5Q6ZUA9 1318 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 GOLGA6L4A6NEF3 574 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 E7EWF7 191 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 GALR2O43603 387 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-202ENST00000394092 UQCRFS1P1P0C7P4 283 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 GPTP24298 496 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 WASHC4Q2M389 1173 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 FBXL16Q8N461 479 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 TTLL11Q8NHH1 800 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 SMARCC2Q8TAQ2 1214 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 BRF1Q92994 677 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 CCDC39Q9UFE4 941 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 TRMT112Q9UI30 125 aaKnown RBP8.49□□□□□ -1.05
SMAD1-202ENST00000394092 ZBTB1Q9Y2K1 713 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 TAF6LQ9Y6J9 622 aa8.49□□□□□ -1.05
SMAD1-202ENST00000394092 COL5A3P25940 1745 aaPredicted RBP8.48□□□□□ -1.05
SMAD1-202ENST00000394092 WDR19Q8NEZ3 1342 aa8.48□□□□□ -1.05
SMAD1-202ENST00000394092 DDB1Q16531 1140 aa8.48□□□□□ -1.05
SMAD1-202ENST00000394092 HLFQ16534 295 aa8.48□□□□□ -1.05
SMAD1-202ENST00000394092 PARP10Q53GL7 1025 aa8.48□□□□□ -1.05
SMAD1-202ENST00000394092 NAA16Q6N069 864 aaPredicted RBP8.48□□□□□ -1.05
SMAD1-202ENST00000394092 ZNF274Q96GC6 653 aaPredicted RBP8.48□□□□□ -1.05
SMAD1-202ENST00000394092 SPATA32Q96LK8 384 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms