RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 KIFC2Q96AC6 838 aa8.3□□□□□ -1.08
NPHP1-203ENST00000393272 USP28Q96RU2 1077 aa8.3□□□□□ -1.08
NPHP1-203ENST00000393272 CEP89Q96ST8 783 aa8.3□□□□□ -1.08
NPHP1-203ENST00000393272 RCOR1Q9UKL0 485 aa8.3□□□□□ -1.08
NPHP1-203ENST00000393272 N4BP2Q86UW6 1770 aaPredicted RBP8.3□□□□□ -1.08
NPHP1-203ENST00000393272 PIK3C2BO00750 1634 aa8.3□□□□□ -1.08
NPHP1-203ENST00000393272 BIN1O00499 593 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 GLRX3O76003 335 aaKnown RBP8.29□□□□□ -1.08
NPHP1-203ENST00000393272 PSMA5P28066 241 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 MAP2K2P36507 400 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 DHX8Q14562 1220 aaKnown RBP8.29□□□□□ -1.08
NPHP1-203ENST00000393272 NCAPHQ15003 741 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 HDXQ7Z353 690 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 MICALL1Q8N3F8 863 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 ANKRD20A12PQ8NF67 263 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 NECTIN2Q92692 538 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 FAM227BQ96M60 508 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 SDF4Q9BRK5 362 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 STK31Q9BXU1 1019 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 ANKZF1Q9H8Y5 726 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 SUFUQ9UMX1 484 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 MAP3K5Q99683 1374 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 ZSCAN12O43309 604 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 EIF3JO75822 258 aaKnown RBP8.29□□□□□ -1.08
NPHP1-203ENST00000393272 ME1P48163 572 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 FANCCQ00597 558 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 ZRSR1Q15695 479 aaKnown RBP8.29□□□□□ -1.08
NPHP1-203ENST00000393272 DNAJC21Q5F1R6 531 aaKnown RBP8.29□□□□□ -1.08
NPHP1-203ENST00000393272 FMR1NBQ8N0W7 255 aaPredicted RBP8.29□□□□□ -1.08
NPHP1-203ENST00000393272 DPF2Q92785 391 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 MAP4K1Q92918 833 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 PNKPQ96T60 521 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 BPIFA3Q9BQP9 254 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 TSPYL4Q9UJ04 414 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 NPHP4O75161 1426 aaPredicted RBP8.29□□□□□ -1.08
NPHP1-203ENST00000393272 NEDD4P46934 1319 aa8.29□□□□□ -1.08
NPHP1-203ENST00000393272 PPFIA4O75335 1185 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 ISM2Q6H9L7 571 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 TMEM139Q8IV31 216 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 HNRNPLLQ8WVV9 542 aaKnown RBP8.28□□□□□ -1.08
NPHP1-203ENST00000393272 CCDC102AQ96A19 550 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 HSD3B7Q9H2F3 369 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 KIAA1468Q9P260 1216 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 ARAP3Q8WWN8 1544 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 A0A1B0GVL5 298 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 ATP6V1AP38606 617 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 CHMP4BP1P59074 171 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 POLA2Q14181 598 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 SKIDA1Q1XH10 827 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 ERCC6L2Q5T890 1561 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 TTLL5Q6EMB2 1281 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 FCHSD1Q86WN1 690 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 DNAAF4Q8WXU2 420 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 CARD10Q9BWT7 1032 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 SIGLEC1Q9BZZ2 1709 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 FAM204AQ9H8W3 233 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 L1RE1Q9UN81 338 aa8.28□□□□□ -1.08
NPHP1-203ENST00000393272 USP42Q9H9J4 1324 aaKnown RBP8.28□□□□□ -1.08
NPHP1-203ENST00000393272 A0A087WUV0 522 aaPredicted RBP8.27□□□□□ -1.08
NPHP1-203ENST00000393272 USP5P45974 858 aa8.27□□□□□ -1.08
NPHP1-203ENST00000393272 SIL1Q9H173 461 aa8.27□□□□□ -1.08
NPHP1-203ENST00000393272 ABCB6Q9NP58 842 aa8.27□□□□□ -1.08
NPHP1-203ENST00000393272 PUF60Q9UHX1 559 aaKnown RBP8.27□□□□□ -1.08
NPHP1-203ENST00000393272 ABCC6O95255 1503 aa8.27□□□□□ -1.08
NPHP1-203ENST00000393272 KIDINS220Q9ULH0 1771 aa8.27□□□□□ -1.08
NPHP1-203ENST00000393272 POGZQ7Z3K3 1410 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 TMEM232C9JQI7 657 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 ARHGAP6O43182 974 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 LIG3P49916 1009 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 MNAT1P51948 309 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 NDUFA8P51970 172 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 NMIQ13287 307 aaPredicted RBP8.27□□□□□ -1.09
NPHP1-203ENST00000393272 TOGARAM2Q6ZUX3 1019 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 FAM71BQ8TC56 605 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 CCDC12Q8WUD4 166 aaPredicted RBP8.27□□□□□ -1.09
NPHP1-203ENST00000393272 MRPS27Q92552 414 aaKnown RBP8.27□□□□□ -1.09
NPHP1-203ENST00000393272 FAM212AQ96EL1 285 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 IRX2Q9BZI1 471 aaPredicted RBP8.27□□□□□ -1.09
NPHP1-203ENST00000393272 MED4Q9NPJ6 270 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 KIF1CO43896 1103 aaKnown RBP8.27□□□□□ -1.09
NPHP1-203ENST00000393272 WDHD1O75717 1129 aaPredicted RBP8.27□□□□□ -1.09
NPHP1-203ENST00000393272 ERLIN2O94905 339 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 UBASH3AP57075 661 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 EIF4A2Q14240 407 aaKnown RBP8.27□□□□□ -1.09
NPHP1-203ENST00000393272 CASP8Q14790 479 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 CFAP100Q494V2 611 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 HSP90B2PQ58FF3 399 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 KCNV1Q6PIU1 500 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 ERC1Q8IUD2 1116 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 CNPY4Q8N129 248 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 RAB21Q9UL25 225 aa8.27□□□□□ -1.09
NPHP1-203ENST00000393272 NRKQ7Z2Y5 1582 aa8.26□□□□□ -1.09
NPHP1-203ENST00000393272 FOXO3O43524 673 aa8.26□□□□□ -1.09
NPHP1-203ENST00000393272 CUTAO60888 179 aa8.26□□□□□ -1.09
NPHP1-203ENST00000393272 EIF5P55010 431 aaKnown RBP8.26□□□□□ -1.09
NPHP1-203ENST00000393272 KARSQ15046 597 aaKnown RBP8.26□□□□□ -1.09
NPHP1-203ENST00000393272 SRGAP1Q7Z6B7 1085 aa8.26□□□□□ -1.09
NPHP1-203ENST00000393272 MSL3Q8N5Y2 521 aaKnown RBP8.26□□□□□ -1.09
NPHP1-203ENST00000393272 CLIC6Q96NY7 704 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms