RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
PTN-202ENST00000393083 PPIP5K2O43314 1243 aa16.64■□□□□ 0.25
PTN-202ENST00000393083 UFL1O94874 794 aa16.64■□□□□ 0.25
PTN-202ENST00000393083 BMP2KLQ5H9B9 411 aa16.64■□□□□ 0.25
PTN-202ENST00000393083 GPR101Q96P66 508 aaPredicted RBP16.64■□□□□ 0.25
PTN-202ENST00000393083 WASHC4Q2M389 1173 aa16.64■□□□□ 0.25
PTN-202ENST00000393083 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
PTN-202ENST00000393083 HELBQ8NG08 1087 aaPredicted RBP16.64■□□□□ 0.25
PTN-202ENST00000393083 COPRSQ9NQ92 184 aa16.64■□□□□ 0.25
PTN-202ENST00000393083 LEMD3Q9Y2U8 911 aa16.64■□□□□ 0.25
PTN-202ENST00000393083 SALL3Q9BXA9 1300 aa16.63■□□□□ 0.25
PTN-202ENST00000393083 FZD9O00144 591 aa16.63■□□□□ 0.25
PTN-202ENST00000393083 TAF5LO75529 589 aa16.63■□□□□ 0.25
PTN-202ENST00000393083 G3BP1Q13283 466 aaKnown RBP eCLIP16.63■□□□□ 0.25
PTN-202ENST00000393083 TTC22Q5TAA0 569 aa16.63■□□□□ 0.25
PTN-202ENST00000393083 EYA3Q99504 573 aa16.63■□□□□ 0.25
PTN-202ENST00000393083 SIL1Q9H173 461 aa16.63■□□□□ 0.25
PTN-202ENST00000393083 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
PTN-202ENST00000393083 EYA2O00167 538 aa16.62■□□□□ 0.25
PTN-202ENST00000393083 RIMBP2O15034 1052 aa16.62■□□□□ 0.25
PTN-202ENST00000393083 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
PTN-202ENST00000393083 JDP2Q8WYK2 163 aa16.62■□□□□ 0.25
PTN-202ENST00000393083 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
PTN-202ENST00000393083 ZNF804BA4D1E1 1349 aa16.62■□□□□ 0.25
PTN-202ENST00000393083 MROH5Q6ZUA9 1318 aa16.62■□□□□ 0.25
PTN-202ENST00000393083 SNAP23O00161 211 aa16.61■□□□□ 0.25
PTN-202ENST00000393083 GSPT1P15170 499 aaKnown RBP16.61■□□□□ 0.25
PTN-202ENST00000393083 MX1P20591 662 aa16.61■□□□□ 0.25
PTN-202ENST00000393083 PDE1AP54750 535 aa16.61■□□□□ 0.25
PTN-202ENST00000393083 VGLL2Q8N8G2 317 aa16.61■□□□□ 0.25
PTN-202ENST00000393083 IRS2Q9Y4H2 1338 aa16.61■□□□□ 0.25
PTN-202ENST00000393083 A0A1B0GUL6 1792 aa16.61■□□□□ 0.25
PTN-202ENST00000393083 MED23Q9ULK4 1368 aa16.6■□□□□ 0.25
PTN-202ENST00000393083 CIAO1O76071 339 aa16.6■□□□□ 0.25
PTN-202ENST00000393083 NIM1KQ8IY84 436 aa16.6■□□□□ 0.25
PTN-202ENST00000393083 ZNF784Q8NCA9 323 aaPredicted RBP16.6■□□□□ 0.25
PTN-202ENST00000393083 ZC3H12CQ9C0D7 883 aaKnown RBP16.6■□□□□ 0.25
PTN-202ENST00000393083 OSBPL3Q9H4L5 887 aa16.6■□□□□ 0.25
PTN-202ENST00000393083 GLTPD2A6NH11 291 aa16.6■□□□□ 0.25
PTN-202ENST00000393083 KLRK1P26718 216 aa16.6■□□□□ 0.25
PTN-202ENST00000393083 TXNRD3Q86VQ6 643 aa16.6■□□□□ 0.25
PTN-202ENST00000393083 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
PTN-202ENST00000393083 ZNRF3Q9ULT6 936 aa16.6■□□□□ 0.25
PTN-202ENST00000393083 ZNF541Q9H0D2 1346 aa16.59■□□□□ 0.25
PTN-202ENST00000393083 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
PTN-202ENST00000393083 SASH1O94885 1247 aa16.59■□□□□ 0.25
PTN-202ENST00000393083 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
PTN-202ENST00000393083 METTL24Q5JXM2 366 aa16.59■□□□□ 0.25
PTN-202ENST00000393083 C15orf52Q6ZUT6 534 aaKnown RBP16.59■□□□□ 0.25
PTN-202ENST00000393083 AOX1Q06278 1338 aa16.58■□□□□ 0.25
PTN-202ENST00000393083 PDE8BO95263 885 aa16.58■□□□□ 0.24
PTN-202ENST00000393083 KCNJ4P48050 445 aa16.58■□□□□ 0.24
PTN-202ENST00000393083 UBE4AQ14139 1066 aa16.58■□□□□ 0.24
PTN-202ENST00000393083 TSHZ3Q63HK5 1081 aa16.58■□□□□ 0.24
PTN-202ENST00000393083 DBNDD1Q9H9R9 158 aa16.58■□□□□ 0.24
PTN-202ENST00000393083 STAP2Q9UGK3 403 aa16.58■□□□□ 0.24
PTN-202ENST00000393083 ECE2O60344 883 aa16.57■□□□□ 0.24
PTN-202ENST00000393083 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
PTN-202ENST00000393083 DPY19L2Q6NUT2 758 aa16.57■□□□□ 0.24
PTN-202ENST00000393083 ZNF526Q8TF50 670 aaPredicted RBP16.57■□□□□ 0.24
PTN-202ENST00000393083 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
PTN-202ENST00000393083 FGFR2P21802 821 aa16.56■□□□□ 0.24
PTN-202ENST00000393083 EIF6P56537 245 aaKnown RBP16.56■□□□□ 0.24
PTN-202ENST00000393083 CXCL9Q07325 125 aa16.56■□□□□ 0.24
PTN-202ENST00000393083 AACSQ86V21 672 aa16.56■□□□□ 0.24
PTN-202ENST00000393083 CDC45O75419 566 aa16.55■□□□□ 0.24
PTN-202ENST00000393083 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
PTN-202ENST00000393083 KCNQ5Q9NR82 932 aa16.55■□□□□ 0.24
PTN-202ENST00000393083 GPC2Q8N158 579 aa16.55■□□□□ 0.24
PTN-202ENST00000393083 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
PTN-202ENST00000393083 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
PTN-202ENST00000393083 CEP126Q9P2H0 1117 aa16.55■□□□□ 0.24
PTN-202ENST00000393083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.55■□□□□ 0.24
PTN-202ENST00000393083 POTECB2RU33 542 aa16.54■□□□□ 0.24
PTN-202ENST00000393083 RAD17O75943 681 aa16.54■□□□□ 0.24
PTN-202ENST00000393083 SEC24BO95487 1268 aa16.54■□□□□ 0.24
PTN-202ENST00000393083 SDSP20132 328 aa16.54■□□□□ 0.24
PTN-202ENST00000393083 TFCP2Q12800 502 aa16.54■□□□□ 0.24
PTN-202ENST00000393083 PUM3Q15397 648 aaKnown RBP16.54■□□□□ 0.24
PTN-202ENST00000393083 PODNQ7Z5L7 613 aa16.54■□□□□ 0.24
PTN-202ENST00000393083 L3MBTL3Q96JM7 780 aaPredicted RBP16.54■□□□□ 0.24
PTN-202ENST00000393083 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
PTN-202ENST00000393083 TTC41PQ6P2S7 1318 aa16.54■□□□□ 0.24
PTN-202ENST00000393083 G3V3G9 751 aa16.53■□□□□ 0.24
PTN-202ENST00000393083 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
PTN-202ENST00000393083 CIAPIN1Q6FI81 312 aa16.53■□□□□ 0.24
PTN-202ENST00000393083 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
PTN-202ENST00000393083 FAM84BQ96KN1 310 aaPredicted RBP16.53■□□□□ 0.24
PTN-202ENST00000393083 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
PTN-202ENST00000393083 TNNI3KQ59H18 835 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 TBC1D9Q6ZT07 1266 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 LPIN2Q92539 896 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 UPF2Q9HAU5 1272 aaKnown RBP16.52■□□□□ 0.24
PTN-202ENST00000393083 CD209Q9NNX6 404 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 GJA3Q9Y6H8 435 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 FPGT-TNNI3KV9GXZ4 949 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 ZNF609O15014 1411 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 WDR90Q96KV7 1748 aa16.52■□□□□ 0.24
PTN-202ENST00000393083 SCN9AQ15858 1988 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms