RNA–Protein interactions for RNA: ENST00000393062.6

SPIRE2-202, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE2, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-202ENST00000393062 SIK1P57059 783 aa25.32■■□□□ 1.64
SPIRE2-202ENST00000393062 TPRNQ4KMQ1 711 aa25.32■■□□□ 1.64
SPIRE2-202ENST00000393062 SUSD4Q5VX71 490 aa25.32■■□□□ 1.64
SPIRE2-202ENST00000393062 PDE8AO60658 829 aa25.31■■□□□ 1.64
SPIRE2-202ENST00000393062 DSCC1Q9BVC3 393 aa25.31■■□□□ 1.64
SPIRE2-202ENST00000393062 CCDC87Q9NVE4 849 aa25.31■■□□□ 1.64
SPIRE2-202ENST00000393062 AFF2P51816 1311 aa25.31■■□□□ 1.64
SPIRE2-202ENST00000393062 SYCE3A1L190 88 aa25.31■■□□□ 1.64
SPIRE2-202ENST00000393062 HCLS1P14317 486 aaPredicted RBP25.31■■□□□ 1.64
SPIRE2-202ENST00000393062 VPS37CA5D8V6 355 aaPredicted RBP25.3■■□□□ 1.64
SPIRE2-202ENST00000393062 MBD3O95983 291 aa25.3■■□□□ 1.64
SPIRE2-202ENST00000393062 TTLL5Q6EMB2 1281 aa25.3■■□□□ 1.64
SPIRE2-202ENST00000393062 VGLL2Q8N8G2 317 aa25.3■■□□□ 1.64
SPIRE2-202ENST00000393062 MYH14Q7Z406 1995 aaKnown RBP25.3■■□□□ 1.64
SPIRE2-202ENST00000393062 ATRNO75882 1429 aa25.29■■□□□ 1.64
SPIRE2-202ENST00000393062 MCAMP43121 646 aa25.29■■□□□ 1.64
SPIRE2-202ENST00000393062 LARP1BQ659C4 914 aaKnown RBP25.29■■□□□ 1.64
SPIRE2-202ENST00000393062 GJD4Q96KN9 370 aaPredicted RBP25.29■■□□□ 1.64
SPIRE2-202ENST00000393062 LAMA4Q16363 1823 aa25.29■■□□□ 1.64
SPIRE2-202ENST00000393062 HELBQ8NG08 1087 aaPredicted RBP25.28■■□□□ 1.64
SPIRE2-202ENST00000393062 RBSNQ9H1K0 784 aa25.28■■□□□ 1.64
SPIRE2-202ENST00000393062 FOXP2O15409 715 aa25.28■■□□□ 1.64
SPIRE2-202ENST00000393062 DNM1Q05193 864 aaKnown RBP25.28■■□□□ 1.64
SPIRE2-202ENST00000393062 SPEF2Q9C093 1822 aa25.28■■□□□ 1.64
SPIRE2-202ENST00000393062 NASPP49321 788 aaPredicted RBP25.27■■□□□ 1.64
SPIRE2-202ENST00000393062 WASHC4Q2M389 1173 aa25.27■■□□□ 1.64
SPIRE2-202ENST00000393062 BRF1Q92994 677 aa25.27■■□□□ 1.64
SPIRE2-202ENST00000393062 CDC37L1Q7L3B6 337 aa25.27■■□□□ 1.64
SPIRE2-202ENST00000393062 SMARCC1Q92922 1105 aaPredicted RBP25.27■■□□□ 1.64
SPIRE2-202ENST00000393062 PUS7LQ9H0K6 701 aaKnown RBP25.27■■□□□ 1.64
SPIRE2-202ENST00000393062 SNAP23O00161 211 aa25.26■■□□□ 1.63
SPIRE2-202ENST00000393062 FIBPO43427 364 aa25.26■■□□□ 1.63
SPIRE2-202ENST00000393062 JAK2O60674 1132 aa25.26■■□□□ 1.63
SPIRE2-202ENST00000393062 CAMTA2O94983 1202 aa25.26■■□□□ 1.63
SPIRE2-202ENST00000393062 PDE8BO95263 885 aa25.26■■□□□ 1.63
SPIRE2-202ENST00000393062 TMEM87AQ8NBN3 555 aa25.26■■□□□ 1.63
SPIRE2-202ENST00000393062 AKAP11Q9UKA4 1901 aa25.26■■□□□ 1.63
SPIRE2-202ENST00000393062 E7EWF7 191 aa25.25■■□□□ 1.63
SPIRE2-202ENST00000393062 FERMT3Q86UX7 667 aa25.25■■□□□ 1.63
SPIRE2-202ENST00000393062 TICAM2Q86XR7 235 aa25.25■■□□□ 1.63
SPIRE2-202ENST00000393062 CHST3Q7LGC8 479 aa25.25■■□□□ 1.63
SPIRE2-202ENST00000393062 SEC31BQ9NQW1 1179 aa25.25■■□□□ 1.63
SPIRE2-202ENST00000393062 RREB1Q92766 1687 aa25.25■■□□□ 1.63
SPIRE2-202ENST00000393062 ONECUT3O60422 494 aaPredicted RBP25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 KCNQ4P56696 695 aa25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 FAM173BQ6P4H8 233 aa25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 LRSAM1Q6UWE0 723 aa25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 DHX32Q7L7V1 743 aaKnown RBP25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 GTF3C6Q969F1 213 aa25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 ZNF831Q5JPB2 1677 aa25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 HSP90B1P14625 803 aaKnown RBP25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 TRPC5Q9UL62 973 aaPredicted RBP25.24■■□□□ 1.63
SPIRE2-202ENST00000393062 PHKA1P46020 1223 aa25.23■■□□□ 1.63
SPIRE2-202ENST00000393062 EXOSC10Q01780 885 aaKnown RBP25.23■■□□□ 1.63
SPIRE2-202ENST00000393062 RRAGDQ9NQL2 400 aaPredicted RBP25.23■■□□□ 1.63
SPIRE2-202ENST00000393062 ATP6V1DQ9Y5K8 247 aa25.22■■□□□ 1.63
SPIRE2-202ENST00000393062 MYO5AQ9Y4I1 1855 aaKnown RBP25.22■■□□□ 1.63
SPIRE2-202ENST00000393062 HAND2P61296 217 aa25.22■■□□□ 1.63
SPIRE2-202ENST00000393062 FGD1P98174 961 aa25.22■■□□□ 1.63
SPIRE2-202ENST00000393062 SCRN1Q12765 414 aa25.22■■□□□ 1.63
SPIRE2-202ENST00000393062 UTP14AQ9BVJ6 771 aaKnown RBP25.22■■□□□ 1.63
SPIRE2-202ENST00000393062 APOBRQ0VD83 1088 aa25.21■■□□□ 1.63
SPIRE2-202ENST00000393062 CCDC102BQ68D86 513 aa25.21■■□□□ 1.63
SPIRE2-202ENST00000393062 FAM43AQ8N2R8 423 aa25.21■■□□□ 1.63
SPIRE2-202ENST00000393062 ZFYP08048 801 aaPredicted RBP25.21■■□□□ 1.63
SPIRE2-202ENST00000393062 NIP7Q9Y221 180 aaKnown RBP eCLIP25.21■■□□□ 1.63
SPIRE2-202ENST00000393062 FGAP02671 866 aa25.2■■□□□ 1.62
SPIRE2-202ENST00000393062 SMIM5Q71RC9 77 aa25.2■■□□□ 1.62
SPIRE2-202ENST00000393062 PTF1AQ7RTS3 328 aa25.2■■□□□ 1.62
SPIRE2-202ENST00000393062 APPBP2Q92624 585 aa25.2■■□□□ 1.62
SPIRE2-202ENST00000393062 PIH1D3Q9NQM4 214 aaKnown RBP25.2■■□□□ 1.62
SPIRE2-202ENST00000393062 NHSQ6T4R5 1651 aa25.2■■□□□ 1.62
SPIRE2-202ENST00000393062 HMGB1P09429 215 aaKnown RBP25.2■■□□□ 1.62
SPIRE2-202ENST00000393062 DDX11Q96FC9 970 aa25.2■■□□□ 1.62
SPIRE2-202ENST00000393062 FGFR2P21802 821 aa25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 LRRFIP1Q32MZ4 808 aaKnown RBP25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 COL5A3P25940 1745 aaPredicted RBP25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 MYH7P12883 1935 aa25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 GPAA1O43292 621 aa25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 PDCP20941 246 aa25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 UBE2HP62256 183 aa25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 SLC9C2Q5TAH2 1124 aa25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 GPHNQ9NQX3 736 aaPredicted RBP25.18■■□□□ 1.62
SPIRE2-202ENST00000393062 ABCC12Q96J65 1359 aa25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 PPFIA3O75145 1194 aa25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 NTSR2O95665 410 aa25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 PUM3Q15397 648 aaKnown RBP25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 ZNF512BQ96KM6 892 aaPredicted RBP25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 AGXT2Q9BYV1 514 aa25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 ADD2P35612 726 aa25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 CCT2P78371 535 aaKnown RBP25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 LPIN2Q92539 896 aa25.17■■□□□ 1.62
SPIRE2-202ENST00000393062 IDH1O75874 414 aaKnown RBP25.16■■□□□ 1.62
SPIRE2-202ENST00000393062 LINC00116Q8NCU8 138 aa25.16■■□□□ 1.62
SPIRE2-202ENST00000393062 AK7Q96M32 723 aa25.16■■□□□ 1.62
SPIRE2-202ENST00000393062 MROH5Q6ZUA9 1318 aa25.16■■□□□ 1.62
SPIRE2-202ENST00000393062 PFKFB2O60825 505 aa25.15■■□□□ 1.62
SPIRE2-202ENST00000393062 CTDNEP1O95476 244 aa25.15■■□□□ 1.62
SPIRE2-202ENST00000393062 MPHOSPH8Q99549 860 aa25.15■■□□□ 1.62
SPIRE2-202ENST00000393062 NCOA5Q9HCD5 579 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms