RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 P4HBP07237 508 aaKnown RBP5.56□□□□□ -1.52
GTDC1-205ENST00000392871 ATP1A2P50993 1020 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 HDLBPQ00341 1268 aaKnown RBP5.56□□□□□ -1.52
GTDC1-205ENST00000392871 NAA30Q147X3 362 aaPredicted RBP5.56□□□□□ -1.52
GTDC1-205ENST00000392871 BMP2KLQ5H9B9 411 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 INTS3Q68E01 1043 aaKnown RBP5.56□□□□□ -1.52
GTDC1-205ENST00000392871 CEP85Q6P2H3 762 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 SLC4A10Q6U841 1118 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 LAPTM4BQ86VI4 370 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 TSEN2Q8NCE0 465 aaKnown RBP5.56□□□□□ -1.52
GTDC1-205ENST00000392871 NUDT12Q9BQG2 462 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 DCTN4Q9UJW0 460 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 DOLKQ9UPQ8 538 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 KIAA0232Q92628 1395 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 NPHP3Q7Z494 1330 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 FMNL1O95466 1100 aaPredicted RBP5.55□□□□□ -1.52
GTDC1-205ENST00000392871 TSHZ3Q63HK5 1081 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 PTCRAQ6ISU1 281 aaPredicted RBP5.55□□□□□ -1.52
GTDC1-205ENST00000392871 GCC1Q96CN9 775 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 KIF2CQ99661 725 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 ARHGAP9Q9BRR9 750 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 XIRP1Q702N8 1843 aaKnown RBP5.55□□□□□ -1.52
GTDC1-205ENST00000392871 USP54Q70EL1 1684 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 NFAT5O94916 1531 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 ERCC5P28715 1186 aaPredicted RBP5.55□□□□□ -1.52
GTDC1-205ENST00000392871 MRPL58Q14197 206 aaKnown RBP5.55□□□□□ -1.52
GTDC1-205ENST00000392871 GIMAP6Q6P9H5 292 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 SH3BP5LQ7L8J4 393 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 TRIM50Q86XT4 487 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 RTF1Q92541 710 aaKnown RBP5.55□□□□□ -1.52
GTDC1-205ENST00000392871 SPATA32Q96LK8 384 aa5.55□□□□□ -1.52
GTDC1-205ENST00000392871 LTBP4Q8N2S1 1624 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 PXDNQ92626 1479 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 MAP3K5Q99683 1374 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 GCP02774 474 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 RAD51AP2Q09MP3 1159 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 ANKRD44Q8N8A2 993 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 LRCH3Q96II8 777 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 HINFPQ9BQA5 517 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 CHMP4AQ9BY43 222 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 DCTPP1Q9H773 170 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 SCUBE2Q9NQ36 999 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.54□□□□□ -1.52
GTDC1-205ENST00000392871 KIF1AQ12756 1690 aa5.54□□□□□ -1.52
GTDC1-205ENST00000392871 DXOO77932 396 aaKnown RBP5.53□□□□□ -1.52
GTDC1-205ENST00000392871 KCNH5Q8NCM2 988 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 IL17REQ8NFR9 667 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 LRRC59Q96AG4 307 aaKnown RBP5.53□□□□□ -1.52
GTDC1-205ENST00000392871 NBPF3Q9H094 633 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 EXOC6BQ9Y2D4 811 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 PTPRCP08575 1304 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 SOS2Q07890 1332 aaPredicted RBP5.53□□□□□ -1.52
GTDC1-205ENST00000392871 SPATA31A3Q5VYP0 1347 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 MAGEB6P1A0A0J9YX57 407 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 STAU1O95793 577 aaKnown RBP5.53□□□□□ -1.52
GTDC1-205ENST00000392871 TTC22Q5TAA0 569 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 TMC7Q7Z402 723 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 ZBTB33Q86T24 672 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 HSCBQ8IWL3 235 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 SETDB2Q96T68 719 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 PCDHB3Q9Y5E6 796 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 KIF24Q5T7B8 1368 aa5.53□□□□□ -1.52
GTDC1-205ENST00000392871 GNAT3A8MTJ3 354 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 KCNQ3O43525 872 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 CDC45O75419 566 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 WEE1P30291 646 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 FKBP4Q02790 459 aaKnown RBP eCLIP5.52□□□□□ -1.53
GTDC1-205ENST00000392871 EAPPQ56P03 285 aaPredicted RBP5.52□□□□□ -1.53
GTDC1-205ENST00000392871 NBPF14Q5TI25 921 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 NBPF6Q5VWK0 638 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 ARHGEF25Q86VW2 580 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 DZIP3Q86Y13 1208 aaKnown RBP5.52□□□□□ -1.53
GTDC1-205ENST00000392871 GPKOWQ92917 476 aaPredicted RBP eCLIP5.52□□□□□ -1.53
GTDC1-205ENST00000392871 NBPF4Q96M43 638 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 TNS3Q68CZ2 1445 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 TRPM3Q9HCF6 1732 aaPredicted RBP5.52□□□□□ -1.53
GTDC1-205ENST00000392871 SLIT3O75094 1523 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 PNMA6EA0A0J9YXQ4 647 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 ANXA1P04083 346 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 BCAMP50895 628 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 MCCD1P59942 119 aaPredicted RBP5.52□□□□□ -1.53
GTDC1-205ENST00000392871 C4orf48Q5BLP8 95 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 SH3RF1Q7Z6J0 888 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 RGL4Q8IZJ4 473 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 IP6K1Q92551 441 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 UBXN4Q92575 508 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 UNC93B1Q9H1C4 597 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 LGR6Q9HBX8 967 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 ERBB3P21860 1342 aa5.52□□□□□ -1.53
GTDC1-205ENST00000392871 MED1Q15648 1581 aaPredicted RBP5.51□□□□□ -1.53
GTDC1-205ENST00000392871 AK9Q5TCS8 1911 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 N4BP2Q86UW6 1770 aaPredicted RBP5.51□□□□□ -1.53
GTDC1-205ENST00000392871 SDSP20132 328 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 DDIT3P35638 169 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 MMP16P51512 607 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 ARMC2Q8NEN0 867 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 PIK3R5Q8WYR1 880 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 DNAJC2Q99543 621 aaKnown RBP5.51□□□□□ -1.53
GTDC1-205ENST00000392871 CHMP4BQ9H444 224 aaKnown RBP5.51□□□□□ -1.53
GTDC1-205ENST00000392871 PHAXQ9H814 394 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms