RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ITPK1Q13572 414 aa30.39■■■□□ 2.46
SMARCD3-203ENST00000392811 PDIA4P13667 645 aaKnown RBP30.39■■■□□ 2.45
SMARCD3-203ENST00000392811 PDCP20941 246 aa30.39■■■□□ 2.45
SMARCD3-203ENST00000392811 BARGINQ6ZT62 677 aa30.39■■■□□ 2.45
SMARCD3-203ENST00000392811 GTF3C6Q969F1 213 aa30.39■■■□□ 2.45
SMARCD3-203ENST00000392811 RREB1Q92766 1687 aa30.39■■■□□ 2.45
SMARCD3-203ENST00000392811 SUSD4Q5VX71 490 aa30.38■■■□□ 2.45
SMARCD3-203ENST00000392811 DHX32Q7L7V1 743 aaKnown RBP30.38■■■□□ 2.45
SMARCD3-203ENST00000392811 SYAP1Q96A49 352 aaPredicted RBP30.38■■■□□ 2.45
SMARCD3-203ENST00000392811 LRRC2Q9BYS8 371 aa30.38■■■□□ 2.45
SMARCD3-203ENST00000392811 DNM1Q05193 864 aaKnown RBP30.37■■■□□ 2.45
SMARCD3-203ENST00000392811 WASHC4Q2M389 1173 aa30.37■■■□□ 2.45
SMARCD3-203ENST00000392811 FIBPO43427 364 aa30.37■■■□□ 2.45
SMARCD3-203ENST00000392811 PDE8BO95263 885 aa30.37■■■□□ 2.45
SMARCD3-203ENST00000392811 HSP90B1P14625 803 aaKnown RBP30.37■■■□□ 2.45
SMARCD3-203ENST00000392811 MCAMP43121 646 aa30.37■■■□□ 2.45
SMARCD3-203ENST00000392811 BRF1Q92994 677 aa30.37■■■□□ 2.45
SMARCD3-203ENST00000392811 LRP5O75197 1615 aa30.36■■■□□ 2.45
SMARCD3-203ENST00000392811 E7EWF7 191 aa30.36■■■□□ 2.45
SMARCD3-203ENST00000392811 PIP4K2BP78356 416 aa30.36■■■□□ 2.45
SMARCD3-203ENST00000392811 CDC37L1Q7L3B6 337 aa30.36■■■□□ 2.45
SMARCD3-203ENST00000392811 AK7Q96M32 723 aa30.36■■■□□ 2.45
SMARCD3-203ENST00000392811 AKAP11Q9UKA4 1901 aa30.36■■■□□ 2.45
SMARCD3-203ENST00000392811 CICQ96RK0 1608 aaPredicted RBP30.35■■■□□ 2.45
SMARCD3-203ENST00000392811 CAMTA2O94983 1202 aa30.35■■■□□ 2.45
SMARCD3-203ENST00000392811 HCLS1P14317 486 aaPredicted RBP30.35■■■□□ 2.45
SMARCD3-203ENST00000392811 TTLL5Q6EMB2 1281 aa30.35■■■□□ 2.45
SMARCD3-203ENST00000392811 APPBP2Q92624 585 aa30.35■■■□□ 2.45
SMARCD3-203ENST00000392811 ZNF512BQ96KM6 892 aaPredicted RBP30.35■■■□□ 2.45
SMARCD3-203ENST00000392811 UBE2HP62256 183 aa30.34■■■□□ 2.45
SMARCD3-203ENST00000392811 FGD1P98174 961 aa30.34■■■□□ 2.45
SMARCD3-203ENST00000392811 EXOSC10Q01780 885 aaKnown RBP30.34■■■□□ 2.45
SMARCD3-203ENST00000392811 MYH14Q7Z406 1995 aaKnown RBP30.34■■■□□ 2.45
SMARCD3-203ENST00000392811 MYH7P12883 1935 aa30.34■■■□□ 2.45
SMARCD3-203ENST00000392811 FAM177BA6PVY3 158 aa30.34■■■□□ 2.45
SMARCD3-203ENST00000392811 FOXP2O15409 715 aa30.34■■■□□ 2.45
SMARCD3-203ENST00000392811 UTP14AQ9BVJ6 771 aaKnown RBP30.33■■■□□ 2.45
SMARCD3-203ENST00000392811 JAK2O60674 1132 aa30.32■■■□□ 2.44
SMARCD3-203ENST00000392811 PUS7LQ9H0K6 701 aaKnown RBP30.32■■■□□ 2.44
SMARCD3-203ENST00000392811 CCDC173Q0VFZ6 552 aa30.32■■■□□ 2.44
SMARCD3-203ENST00000392811 CSPP1Q1MSJ5 1256 aa30.32■■■□□ 2.44
SMARCD3-203ENST00000392811 FERMT3Q86UX7 667 aa30.31■■■□□ 2.44
SMARCD3-203ENST00000392811 AGXT2Q9BYV1 514 aa30.31■■■□□ 2.44
SMARCD3-203ENST00000392811 RRAGDQ9NQL2 400 aaPredicted RBP30.31■■■□□ 2.44
SMARCD3-203ENST00000392811 MROH5Q6ZUA9 1318 aa30.31■■■□□ 2.44
SMARCD3-203ENST00000392811 KCNQ2O43526 872 aa30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 SCRN1Q12765 414 aa30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 ANP32BQ92688 251 aaKnown RBP30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 PPP1R9BQ96SB3 815 aa30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 CTNNA3Q9UI47 895 aa30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 PFKFB2O60825 505 aa30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 PUM3Q15397 648 aaKnown RBP30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 PARP10Q53GL7 1025 aa30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.3■■■□□ 2.44
SMARCD3-203ENST00000392811 PHKA1P46020 1223 aa30.29■■■□□ 2.44
SMARCD3-203ENST00000392811 CCDC102BQ68D86 513 aa30.29■■■□□ 2.44
SMARCD3-203ENST00000392811 HELBQ8NG08 1087 aaPredicted RBP30.29■■■□□ 2.44
SMARCD3-203ENST00000392811 TOM1O60784 492 aa30.29■■■□□ 2.44
SMARCD3-203ENST00000392811 PHF14O94880 888 aa30.29■■■□□ 2.44
SMARCD3-203ENST00000392811 FGFR2P21802 821 aa30.29■■■□□ 2.44
SMARCD3-203ENST00000392811 APOBRQ0VD83 1088 aa30.29■■■□□ 2.44
SMARCD3-203ENST00000392811 SMARCC1Q92922 1105 aaPredicted RBP30.29■■■□□ 2.44
SMARCD3-203ENST00000392811 TPRNQ4KMQ1 711 aa30.28■■■□□ 2.44
SMARCD3-203ENST00000392811 LPIN2Q92539 896 aa30.28■■■□□ 2.44
SMARCD3-203ENST00000392811 DDX60Q8IY21 1712 aaKnown RBP30.28■■■□□ 2.44
SMARCD3-203ENST00000392811 ARAP2Q8WZ64 1704 aa30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 ARID4AP29374 1257 aaPredicted RBP30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 TTF1Q15361 905 aaPredicted RBP30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 PIH1D3Q9NQM4 214 aaKnown RBP30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 GPAA1O43292 621 aa30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 FGAP02671 866 aa30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 ADD2P35612 726 aa30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 IMMTQ16891 758 aaKnown RBP30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 ZSCAN25Q6NSZ9 544 aa30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 SEC31BQ9NQW1 1179 aa30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 NIP7Q9Y221 180 aaKnown RBP eCLIP30.27■■■□□ 2.44
SMARCD3-203ENST00000392811 CCDC183Q5T5S1 534 aa30.26■■■□□ 2.43
SMARCD3-203ENST00000392811 NTSR2O95665 410 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 UQCRFS1P1P0C7P4 283 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 HAND2P61296 217 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 KRT85P78386 507 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 FAM173BQ6P4H8 233 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 CHST3Q7LGC8 479 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 SMARCC2Q8TAQ2 1214 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 LLPHQ9BRT6 129 aaKnown RBP30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 TSPY26PQ9H489 355 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 COL5A3P25940 1745 aaPredicted RBP30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 FAM98CQ17RN3 349 aaKnown RBP30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 SLC9C2Q5TAH2 1124 aa30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 TRIM44Q96DX7 344 aaPredicted RBP30.25■■■□□ 2.43
SMARCD3-203ENST00000392811 DDX11Q96FC9 970 aa30.24■■■□□ 2.43
SMARCD3-203ENST00000392811 MPHOSPH8Q99549 860 aa30.24■■■□□ 2.43
SMARCD3-203ENST00000392811 MYO5AQ9Y4I1 1855 aaKnown RBP30.24■■■□□ 2.43
SMARCD3-203ENST00000392811 ATRNO75882 1429 aa30.23■■■□□ 2.43
SMARCD3-203ENST00000392811 CCDC152Q4G0S7 254 aa30.23■■■□□ 2.43
SMARCD3-203ENST00000392811 NSUN7Q8NE18 718 aaKnown RBP30.23■■■□□ 2.43
SMARCD3-203ENST00000392811 LAMB2P55268 1798 aa30.23■■■□□ 2.43
SMARCD3-203ENST00000392811 IDH1O75874 414 aaKnown RBP30.22■■■□□ 2.43
SMARCD3-203ENST00000392811 SLC5A1P13866 664 aa30.22■■■□□ 2.43
SMARCD3-203ENST00000392811 TTC6Q86TZ1 520 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms