RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 GOLGA8AA7E2F4 631 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 PPP1R2P41236 205 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 NAA25Q14CX7 972 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.62■□□□□ 0.25
CCDC50-201ENST00000392455 GOLGA8QA0A0J9YX86 632 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 GOLGA8OA6NCC3 632 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 GOLGA8NF8WBI6 632 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 WHAMMP3Q1A5X7 153 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 CEP85LQ5SZL2 805 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 GNG11P61952 73 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 CAPN2P17655 700 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 AMOTQ4VCS5 1084 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 PHACTR2O75167 634 aa16.62■□□□□ 0.25
CCDC50-201ENST00000392455 NKTRP30414 1462 aaKnown RBP16.61■□□□□ 0.25
CCDC50-201ENST00000392455 HLA-DOAP06340 250 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
CCDC50-201ENST00000392455 TMTC2Q8N394 836 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 ATP2A3Q93084 1043 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
CCDC50-201ENST00000392455 LGSNQ5TDP6 509 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 FAM76AQ8TAV0 307 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 MICALL1Q8N3F8 863 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 PTPN23Q9H3S7 1636 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 TRMT1LQ7Z2T5 733 aaKnown RBP16.61■□□□□ 0.25
CCDC50-201ENST00000392455 A0A1B0GUL7 405 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 TMC6Q7Z403 805 aa16.61■□□□□ 0.25
CCDC50-201ENST00000392455 TROQ12816 1431 aaPredicted RBP16.61■□□□□ 0.25
CCDC50-201ENST00000392455 ACTN4O43707 911 aaKnown RBP16.61■□□□□ 0.25
CCDC50-201ENST00000392455 F6X3S4 739 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 INPP1P49441 399 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 HAUS7Q99871 368 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 RSPH14Q9UHP6 348 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
CCDC50-201ENST00000392455 HDXQ7Z353 690 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 KIFAP3Q92845 792 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 PLCB1Q9NQ66 1216 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
CCDC50-201ENST00000392455 PSMA7O14818 248 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 GSDMBQ8TAX9 411 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 CPLX3Q8WVH0 158 aa16.6■□□□□ 0.25
CCDC50-201ENST00000392455 WDR46O15213 610 aaKnown RBP16.59■□□□□ 0.25
CCDC50-201ENST00000392455 GPTP24298 496 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 LARP6Q9BRS8 491 aaKnown RBP16.59■□□□□ 0.25
CCDC50-201ENST00000392455 CCDC141Q6ZP82 1450 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 LDHCP07864 332 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 KCNG4Q8TDN1 519 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 ZC3H15Q8WU90 426 aaKnown RBP16.59■□□□□ 0.25
CCDC50-201ENST00000392455 TRIM47Q96LD4 638 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 RASSF4Q9H2L5 321 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 TMOD4Q9NZQ9 345 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 GNAQP50148 359 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 VAT1LQ9HCJ6 419 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 ZC4H2Q9NQZ6 224 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 CCDC170Q8IYT3 715 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 ATP6V0A2Q9Y487 856 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
CCDC50-201ENST00000392455 N4BP3O15049 544 aa16.58■□□□□ 0.25
CCDC50-201ENST00000392455 ALDH1L2Q3SY69 923 aa16.58■□□□□ 0.25
CCDC50-201ENST00000392455 LIMCH1Q9UPQ0 1083 aa16.58■□□□□ 0.25
CCDC50-201ENST00000392455 I3L4J1 428 aa16.58■□□□□ 0.25
CCDC50-201ENST00000392455 MYO1BO43795 1136 aa16.58■□□□□ 0.25
CCDC50-201ENST00000392455 GSTO1P78417 241 aa16.58■□□□□ 0.25
CCDC50-201ENST00000392455 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
CCDC50-201ENST00000392455 MCUR1Q96AQ8 359 aa16.58■□□□□ 0.24
CCDC50-201ENST00000392455 GOLGA6CA6NDK9 693 aa16.58■□□□□ 0.24
CCDC50-201ENST00000392455 GOLGA6BA6NDN3 693 aa16.58■□□□□ 0.24
CCDC50-201ENST00000392455 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.24
CCDC50-201ENST00000392455 GOLGA6DP0CG33 693 aa16.58■□□□□ 0.24
CCDC50-201ENST00000392455 GOLGA6AQ9NYA3 693 aa16.58■□□□□ 0.24
CCDC50-201ENST00000392455 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
CCDC50-201ENST00000392455 ZGPATQ8N5A5 531 aaKnown RBP16.58■□□□□ 0.24
CCDC50-201ENST00000392455 DDX27Q96GQ7 796 aaKnown RBP16.58■□□□□ 0.24
CCDC50-201ENST00000392455 PPP1R7Q15435 360 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 HSP90AA5PQ58FG0 334 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 ITIH3Q06033 890 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 MAP3K2Q9Y2U5 619 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 GKAP1Q5VSY0 366 aaPredicted RBP16.57■□□□□ 0.24
CCDC50-201ENST00000392455 ARMC9Q7Z3E5 817 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 STK24Q9Y6E0 443 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 CCDC124Q96CT7 223 aaKnown RBP16.57■□□□□ 0.24
CCDC50-201ENST00000392455 KIF11P52732 1056 aa16.57■□□□□ 0.24
CCDC50-201ENST00000392455 LARSQ9P2J5 1176 aaKnown RBP16.57■□□□□ 0.24
CCDC50-201ENST00000392455 LUC7L3O95232 432 aaKnown RBP16.56■□□□□ 0.24
CCDC50-201ENST00000392455 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
CCDC50-201ENST00000392455 TAF12Q16514 161 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 VWA3BQ502W6 1294 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 DRC3Q9H069 523 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 SEL1L2Q5TEA6 688 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 CABP5Q9NP86 173 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 NESP48681 1621 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 RNF10Q8N5U6 811 aaKnown RBP16.56■□□□□ 0.24
CCDC50-201ENST00000392455 UBASH3AP57075 661 aa16.56■□□□□ 0.24
CCDC50-201ENST00000392455 FAM8A1Q9UBU6 413 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms