RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ABCC12Q96J65 1359 aa23.78■■□□□ 1.4
CSNK1D-203ENST00000392334 TPTE2Q6XPS3 522 aa23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 TMEM63CQ9P1W3 806 aa23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 PALD1Q9ULE6 856 aa23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 NPHP1O15259 732 aa23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 RRP9O43818 475 aaKnown RBP23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 ADORA1P30542 326 aa23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 DDR1Q08345 913 aa23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 EVI5LQ96CN4 794 aa23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 RBM27Q9P2N5 1060 aaKnown RBP23.77■■□□□ 1.4
CSNK1D-203ENST00000392334 OFD1O75665 1012 aa23.76■■□□□ 1.39
CSNK1D-203ENST00000392334 ATP5JP18859 108 aa23.76■■□□□ 1.39
CSNK1D-203ENST00000392334 MSNP26038 577 aaKnown RBP23.76■■□□□ 1.39
CSNK1D-203ENST00000392334 NYXQ9GZU5 481 aa23.76■■□□□ 1.39
CSNK1D-203ENST00000392334 GPR108Q9NPR9 543 aa23.76■■□□□ 1.39
CSNK1D-203ENST00000392334 FBXO3Q9UK99 471 aa23.76■■□□□ 1.39
CSNK1D-203ENST00000392334 MPHOSPH8Q99549 860 aa23.76■■□□□ 1.39
CSNK1D-203ENST00000392334 ANO2Q9NQ90 1003 aa23.76■■□□□ 1.39
CSNK1D-203ENST00000392334 ZNF609O15014 1411 aa23.75■■□□□ 1.39
CSNK1D-203ENST00000392334 GOLGB1Q14789 3259 aaKnown RBP23.75■■□□□ 1.39
CSNK1D-203ENST00000392334 TERF1P54274 439 aa23.75■■□□□ 1.39
CSNK1D-203ENST00000392334 NOL7Q9UMY1 257 aaKnown RBP23.75■■□□□ 1.39
CSNK1D-203ENST00000392334 CASZ1Q86V15 1759 aa23.75■■□□□ 1.39
CSNK1D-203ENST00000392334 LAMB2P55268 1798 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 SNAP23O00161 211 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 SERPINB2P05120 415 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 NLGN1Q8N2Q7 840 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 XAGE2Q96GT9 111 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 AKAP2Q9Y2D5 859 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 RIC1Q4ADV7 1423 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 TAF5LO75529 589 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 GORABQ5T7V8 394 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 FSD1Q9BTV5 496 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 DIAPH3Q9NSV4 1193 aa23.74■■□□□ 1.39
CSNK1D-203ENST00000392334 POLRMTO00411 1230 aaKnown RBP23.73■■□□□ 1.39
CSNK1D-203ENST00000392334 CNBD1Q8NA66 436 aa23.73■■□□□ 1.39
CSNK1D-203ENST00000392334 ZNF500O60304 480 aaPredicted RBP23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 ATP2B3Q16720 1220 aa23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 PRR5LQ6MZQ0 368 aa23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 ILDR2Q71H61 639 aa23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 QSER1Q2KHR3 1735 aa23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 CHGBP05060 677 aa23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 HSPA4P34932 840 aa23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 SLC10A5Q5PT55 438 aa23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 DDX46Q7L014 1031 aaKnown RBP23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 NSFL1CQ9UNZ2 370 aaKnown RBP23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 TAF1P21675 1872 aa23.72■■□□□ 1.39
CSNK1D-203ENST00000392334 PDE8BO95263 885 aa23.71■■□□□ 1.39
CSNK1D-203ENST00000392334 IGHMBP2P38935 993 aaKnown RBP23.71■■□□□ 1.39
CSNK1D-203ENST00000392334 VGLL2Q8N8G2 317 aa23.71■■□□□ 1.39
CSNK1D-203ENST00000392334 FAM227BQ96M60 508 aa23.71■■□□□ 1.39
CSNK1D-203ENST00000392334 MMP10P09238 476 aa23.71■■□□□ 1.39
CSNK1D-203ENST00000392334 MCM5P33992 734 aa23.71■■□□□ 1.39
CSNK1D-203ENST00000392334 HAUS7Q99871 368 aa23.71■■□□□ 1.39
CSNK1D-203ENST00000392334 SYCE3A1L190 88 aa23.7■■□□□ 1.38
CSNK1D-203ENST00000392334 SNRKQ9NRH2 765 aa23.7■■□□□ 1.38
CSNK1D-203ENST00000392334 COL4A1P02462 1669 aa23.7■■□□□ 1.38
CSNK1D-203ENST00000392334 TNRC6CQ9HCJ0 1690 aaKnown RBP23.7■■□□□ 1.38
CSNK1D-203ENST00000392334 GOLIM4O00461 696 aa23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 SGSM2O43147 1006 aa23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 IFIT1P09914 478 aaKnown RBP23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 SYAP1Q96A49 352 aaPredicted RBP23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 NLRP3Q96P20 1036 aa23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 HSP90AA2PQ14568 343 aaPredicted RBP23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 SF3B3Q15393 1217 aaKnown RBP23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 CCDC158Q5M9N0 1113 aa23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 TTC39AQ5SRH9 613 aa23.69■■□□□ 1.38
CSNK1D-203ENST00000392334 FKBP4Q02790 459 aaKnown RBP eCLIP23.68■■□□□ 1.385e-7■□□□□ 8.6
CSNK1D-203ENST00000392334 NMIQ13287 307 aaPredicted RBP23.68■■□□□ 1.38
CSNK1D-203ENST00000392334 KIAA1211Q6ZU35 1233 aa23.68■■□□□ 1.38
CSNK1D-203ENST00000392334 CHAMP1Q96JM3 812 aa23.68■■□□□ 1.38
CSNK1D-203ENST00000392334 WDR33Q9C0J8 1336 aaKnown RBP23.68■■□□□ 1.38
CSNK1D-203ENST00000392334 CELF1Q92879 486 aaKnown RBP23.67■■□□□ 1.38
CSNK1D-203ENST00000392334 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.67■■□□□ 1.38
CSNK1D-203ENST00000392334 MROH5Q6ZUA9 1318 aa23.67■■□□□ 1.38
CSNK1D-203ENST00000392334 SCARF1Q14162 830 aa23.67■■□□□ 1.38
CSNK1D-203ENST00000392334 PI16Q6UXB8 463 aa23.67■■□□□ 1.38
CSNK1D-203ENST00000392334 CDC5LQ99459 802 aaKnown RBP23.67■■□□□ 1.38
CSNK1D-203ENST00000392334 RAD50Q92878 1312 aa23.67■■□□□ 1.38
CSNK1D-203ENST00000392334 SLFNL1Q499Z3 407 aa23.66■■□□□ 1.38
CSNK1D-203ENST00000392334 ANKRD18AQ8IVF6 992 aa23.66■■□□□ 1.38
CSNK1D-203ENST00000392334 TMEM87AQ8NBN3 555 aa23.66■■□□□ 1.38
CSNK1D-203ENST00000392334 PAG1Q9NWQ8 432 aa23.66■■□□□ 1.38
CSNK1D-203ENST00000392334 ZKSCAN5Q9Y2L8 839 aa23.66■■□□□ 1.38
CSNK1D-203ENST00000392334 A0A0D9SFI3 127 aa23.66■■□□□ 1.38
CSNK1D-203ENST00000392334 WTIPA6NIX2 430 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-203ENST00000392334 CHRNDQ07001 517 aa23.65■■□□□ 1.38
CSNK1D-203ENST00000392334 PUM3Q15397 648 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-203ENST00000392334 FOXD4L5Q5VV16 416 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-203ENST00000392334 FOXD4L4Q8WXT5 416 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-203ENST00000392334 SPEF2Q9C093 1822 aa23.65■■□□□ 1.38
CSNK1D-203ENST00000392334 RTL9Q8NET4 1388 aa23.65■■□□□ 1.38
CSNK1D-203ENST00000392334 ST5P78524 1137 aa23.64■■□□□ 1.38
CSNK1D-203ENST00000392334 RUFY2Q8WXA3 655 aa23.64■■□□□ 1.38
CSNK1D-203ENST00000392334 CCDC39Q9UFE4 941 aa23.64■■□□□ 1.38
CSNK1D-203ENST00000392334 PARP3Q9Y6F1 533 aa23.64■■□□□ 1.38
CSNK1D-203ENST00000392334 UPF3BQ9BZI7 483 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-203ENST00000392334 TSPY26PQ9H489 355 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms