RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.37■□□□□ 0.212e-7■■■□□ 19
RTF1-201ENST00000389629 TUBB4AP04350 444 aa16.37■□□□□ 0.21
RTF1-201ENST00000389629 AIDAQ96BJ3 306 aa16.37■□□□□ 0.21
RTF1-201ENST00000389629 OTUD7BQ6GQQ9 843 aa16.37■□□□□ 0.21
RTF1-201ENST00000389629 IQCEQ6IPM2 695 aa16.37■□□□□ 0.21
RTF1-201ENST00000389629 LMBR1LQ6UX01 489 aa16.37■□□□□ 0.21
RTF1-201ENST00000389629 UHRF1BP1LA0JNW5 1464 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 A0A0D9SFI3 127 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 TDO2P48775 406 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 IL17REQ8NFR9 667 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 GOLGA8AA7E2F4 631 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 METTL24Q5JXM2 366 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 ZBTB3Q9H5J0 574 aa16.36■□□□□ 0.21
RTF1-201ENST00000389629 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
RTF1-201ENST00000389629 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.21
RTF1-201ENST00000389629 NCOA7Q8NI08 942 aa16.35■□□□□ 0.21
RTF1-201ENST00000389629 DRC1Q96MC2 740 aa16.35■□□□□ 0.21
RTF1-201ENST00000389629 XPO4Q9C0E2 1151 aaKnown RBP16.35■□□□□ 0.21
RTF1-201ENST00000389629 SMC1AQ14683 1233 aaKnown RBP16.35■□□□□ 0.21
RTF1-201ENST00000389629 ZNF569Q5MCW4 686 aa16.35■□□□□ 0.21
RTF1-201ENST00000389629 WASF1Q92558 559 aa16.35■□□□□ 0.21
RTF1-201ENST00000389629 SUCLG2Q96I99 432 aa16.35■□□□□ 0.21
RTF1-201ENST00000389629 ALG1Q9BT22 464 aa16.35■□□□□ 0.21
RTF1-201ENST00000389629 NACAP1Q9BZK3 213 aa16.35■□□□□ 0.21
RTF1-201ENST00000389629 CCDC175P0C221 793 aa16.35■□□□□ 0.21
RTF1-201ENST00000389629 SBNO1A3KN83 1393 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 PAG1Q9NWQ8 432 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 AKAP2Q9Y2D5 859 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 TERF2Q15554 542 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 DNAJC21Q5F1R6 531 aaKnown RBP16.34■□□□□ 0.21
RTF1-201ENST00000389629 BAG1Q99933 345 aaPredicted RBP16.34■□□□□ 0.21
RTF1-201ENST00000389629 UBAC1Q9BSL1 405 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 RABEP2Q9H5N1 569 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 FANCCQ00597 558 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 STIM1Q13586 685 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 ARID5BQ14865 1188 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
RTF1-201ENST00000389629 SLC12A7Q9Y666 1083 aa16.34■□□□□ 0.21
RTF1-201ENST00000389629 MED14O60244 1454 aa16.33■□□□□ 0.21
RTF1-201ENST00000389629 PRC1O43663 620 aa16.33■□□□□ 0.21
RTF1-201ENST00000389629 FBXO38Q6PIJ6 1188 aa16.33■□□□□ 0.21
RTF1-201ENST00000389629 TMEM87AQ8NBN3 555 aa16.33■□□□□ 0.21
RTF1-201ENST00000389629 JADE2Q9NQC1 790 aa16.33■□□□□ 0.21
RTF1-201ENST00000389629 IFIT3O14879 490 aaKnown RBP16.33■□□□□ 0.2
RTF1-201ENST00000389629 CALRP27797 417 aaKnown RBP16.33■□□□□ 0.2
RTF1-201ENST00000389629 EPS15P42566 896 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 ANKRD24Q8TF21 1146 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 DBNDD2Q9BQY9 259 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 N4BP3O15049 544 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 KCNQ3O43525 872 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 LRRC7Q96NW7 1537 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 A0A1B0GUL7 405 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 CTAGE9A4FU28 777 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 MCM3P25205 808 aa16.33■□□□□ 0.2
RTF1-201ENST00000389629 SEC31AO94979 1220 aaKnown RBP16.32■□□□□ 0.2
RTF1-201ENST00000389629 AFMP43652 599 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 STX17P56962 302 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 SSRP1Q08945 709 aaKnown RBP16.32■□□□□ 0.2
RTF1-201ENST00000389629 NBPF11Q86T75 865 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 CEP112Q8N8E3 955 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 IQGAP1P46940 1657 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 YEATS4O95619 227 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 NAPBQ9H115 298 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 CEP131Q9UPN4 1083 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 HDXQ7Z353 690 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 CFAP74Q9C0B2 1584 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 EFCAB6Q5THR3 1501 aa16.32■□□□□ 0.2
RTF1-201ENST00000389629 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
RTF1-201ENST00000389629 EIF4A1P60842 406 aaKnown RBP16.31■□□□□ 0.2
RTF1-201ENST00000389629 ATF3P18847 181 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 MYL5Q02045 173 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 TDRD7Q8NHU6 1098 aaKnown RBP16.31■□□□□ 0.2
RTF1-201ENST00000389629 CAPZA3Q96KX2 299 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 USP28Q96RU2 1077 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
RTF1-201ENST00000389629 TMEM67Q5HYA8 995 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 BEND3Q5T5X7 828 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 PNPLA6Q8IY17 1366 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 RXRAP19793 462 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 SPA17Q15506 151 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
RTF1-201ENST00000389629 ARHGEF10O15013 1369 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 PROSER2Q86WR7 435 aaPredicted RBP16.3■□□□□ 0.2
RTF1-201ENST00000389629 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 ATP2C2O75185 946 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 BABAM1Q9NWV8 329 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 RAD21O60216 631 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 HNRNPH2P55795 449 aaKnown RBP16.3■□□□□ 0.2
RTF1-201ENST00000389629 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 TIMM10P62072 90 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 TAX1BP1Q86VP1 789 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.3■□□□□ 0.2
RTF1-201ENST00000389629 BCCIPQ9P287 314 aaKnown RBP eCLIP16.3■□□□□ 0.2
RTF1-201ENST00000389629 TNRQ92752 1358 aa16.3■□□□□ 0.2
RTF1-201ENST00000389629 EBAG9O00559 213 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms