RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 TRPM2O94759 1503 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
LRRK1-201ENST00000388948 BCCIPQ9P287 314 aaKnown RBP eCLIP16.95■□□□□ 0.3
LRRK1-201ENST00000388948 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 UBXN4Q92575 508 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 GRPEL1Q9HAV7 217 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 IP6K1Q92551 441 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 IL16Q14005 1332 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 NOP56O00567 594 aaKnown RBP16.95■□□□□ 0.3
LRRK1-201ENST00000388948 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 GCOM1H8Y6P7 765 aaPredicted RBP16.95■□□□□ 0.3
LRRK1-201ENST00000388948 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
LRRK1-201ENST00000388948 MYZAPP0CAP1 466 aa16.95■□□□□ 0.3
LRRK1-201ENST00000388948 HLTFQ14527 1009 aaKnown RBP eCLIP16.94■□□□□ 0.3
LRRK1-201ENST00000388948 HIBADHP31937 336 aaKnown RBP16.94■□□□□ 0.3
LRRK1-201ENST00000388948 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 CALML3P27482 149 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 RTL9Q8NET4 1388 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 GOLGA6L10A0A0M3HER8 536 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 ASIC1P78348 528 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 SYCP2Q9BX26 1530 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 ZMYND15Q9H091 742 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 TMX1Q9H3N1 280 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 ABCC1P33527 1531 aa16.94■□□□□ 0.3
LRRK1-201ENST00000388948 HOXC9P31274 260 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 EP400NLQ6ZTU2 488 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 KRT79Q5XKE5 535 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
LRRK1-201ENST00000388948 GNA11P29992 359 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 RRAGBQ5VZM2 374 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 TBC1D9Q6ZT07 1266 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 INCENPQ9NQS7 918 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 RBM27Q9P2N5 1060 aaKnown RBP16.93■□□□□ 0.3
LRRK1-201ENST00000388948 IKBKGQ9Y6K9 419 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 FSD2A1L4K1 749 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 PARP1P09874 1014 aaKnown RBP16.93■□□□□ 0.3
LRRK1-201ENST00000388948 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 MAST3O60307 1309 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 MCM4P33991 863 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 SYKP43405 635 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 GPCPD1Q9NPB8 672 aa16.93■□□□□ 0.3
LRRK1-201ENST00000388948 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 SPOUT1Q5T280 376 aaKnown RBP16.92■□□□□ 0.3
LRRK1-201ENST00000388948 MTERF4Q7Z6M4 381 aaKnown RBP16.92■□□□□ 0.3
LRRK1-201ENST00000388948 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
LRRK1-201ENST00000388948 ALDH1B1P30837 517 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 EYA1Q99502 592 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 PLVAPQ9BX97 442 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 DDX19AQ9NUU7 478 aaKnown RBP16.92■□□□□ 0.3
LRRK1-201ENST00000388948 CLIP2Q9UDT6 1046 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 ITSN2Q9NZM3 1697 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 N4BP3O15049 544 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 LPXNO60711 386 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 RBM8AQ9Y5S9 174 aaKnown RBP16.92■□□□□ 0.3
LRRK1-201ENST00000388948 FERP16591 822 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 CALRP27797 417 aaKnown RBP16.92■□□□□ 0.3
LRRK1-201ENST00000388948 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 TTC22Q5TAA0 569 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 NECAB1Q8N987 351 aa16.92■□□□□ 0.3
LRRK1-201ENST00000388948 HARSP12081 509 aaKnown RBP16.91■□□□□ 0.3
LRRK1-201ENST00000388948 TFCP2Q12800 502 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 GDPD2Q9HCC8 539 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 NPATQ14207 1427 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 URI1O94763 535 aaPredicted RBP16.91■□□□□ 0.3
LRRK1-201ENST00000388948 MAP9Q49MG5 647 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 Q6ZUG5 572 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 HS2ST1Q7LGA3 356 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 FCHSD1Q86WN1 690 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 NAA15Q9BXJ9 866 aaKnown RBP16.91■□□□□ 0.3
LRRK1-201ENST00000388948 GBP3Q9H0R5 595 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
LRRK1-201ENST00000388948 IRX3P78415 501 aaPredicted RBP16.91■□□□□ 0.3
LRRK1-201ENST00000388948 STX1AQ16623 288 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 TBX22Q9Y458 520 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 CEP83Q9Y592 693 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 ITGA6P23229 1130 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 KIF22Q14807 665 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 TRIM6Q9C030 488 aaPredicted RBP16.91■□□□□ 0.3
LRRK1-201ENST00000388948 TCP10Q12799 353 aa16.91■□□□□ 0.3
LRRK1-201ENST00000388948 GPATCH8Q9UKJ3 1502 aaKnown RBP16.91■□□□□ 0.3
LRRK1-201ENST00000388948 PTPDC1A2A3K4 754 aa16.9■□□□□ 0.3
LRRK1-201ENST00000388948 GJC1P36383 396 aa16.9■□□□□ 0.3
LRRK1-201ENST00000388948 IFI16Q16666 785 aaKnown RBP16.9■□□□□ 0.3
LRRK1-201ENST00000388948 ZSCAN16Q9H4T2 348 aaPredicted RBP16.9■□□□□ 0.3
LRRK1-201ENST00000388948 ATP10BO94823 1461 aa16.9■□□□□ 0.3
LRRK1-201ENST00000388948 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
LRRK1-201ENST00000388948 CHST3Q7LGC8 479 aa16.9■□□□□ 0.3
LRRK1-201ENST00000388948 POLKQ9UBT6 870 aa16.9■□□□□ 0.3
LRRK1-201ENST00000388948 CSADQ9Y600 493 aa16.9■□□□□ 0.3
LRRK1-201ENST00000388948 AKR1B10O60218 316 aa16.9■□□□□ 0.3
LRRK1-201ENST00000388948 TMC6Q7Z403 805 aa16.89■□□□□ 0.29
LRRK1-201ENST00000388948 BICC1Q9H694 974 aaKnown RBP16.89■□□□□ 0.29
LRRK1-201ENST00000388948 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
LRRK1-201ENST00000388948 MYCLP12524 364 aaPredicted RBP16.89■□□□□ 0.29
LRRK1-201ENST00000388948 EEF2P13639 858 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms