RNA–Protein interactions for RNA: ENST00000384205.1

RNU6-4P-201, Transcript of RNA, U6 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU6-4P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-4P-201ENST00000384205 PLD4Q96BZ4 506 aa4.84□□□□□ -1.63
RNU6-4P-201ENST00000384205 PBX4Q9BYU1 374 aa4.84□□□□□ -1.63
RNU6-4P-201ENST00000384205 MUC3BQ9H195 1237 aa4.84□□□□□ -1.63
RNU6-4P-201ENST00000384205 RRAGCQ9HB90 399 aa4.84□□□□□ -1.63
RNU6-4P-201ENST00000384205 NLRP2Q9NX02 1062 aa4.84□□□□□ -1.63
RNU6-4P-201ENST00000384205 KANSL3Q9P2N6 904 aa4.84□□□□□ -1.63
RNU6-4P-201ENST00000384205 STARD13Q9Y3M8 1113 aa4.84□□□□□ -1.63
RNU6-4P-201ENST00000384205 PNMA6FA0A0J9YX94 578 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 SPDYE3A6NKU9 549 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 M0R082 166 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 P4HBP07237 508 aaKnown RBP4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 COL13A1Q5TAT6 717 aaPredicted RBP4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 KIAA0319Q5VV43 1072 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 NPAS4Q8IUM7 802 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 ZNF417Q8TAU3 575 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 SCARF2Q96GP6 870 aaPredicted RBP4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 ZNF587Q96SQ5 575 aaPredicted RBP4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 LPIN3Q9BQK8 851 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 SMG9Q9H0W8 520 aaKnown RBP4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 JPH1Q9HDC5 661 aaPredicted RBP4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 DZANK1Q9NVP4 752 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 NAGPAQ9UK23 515 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 MKL2Q9ULH7 1088 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 TRAK1Q9UPV9 953 aa4.83□□□□□ -1.64
RNU6-4P-201ENST00000384205 GNB5O14775 395 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 EIF4EBP3O60516 100 aaPredicted RBP4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 PRPF40AO75400 957 aaKnown RBP4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 ALBP02768 609 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 LDHBP07195 334 aaKnown RBP4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 PTPRAP18433 802 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 DGKGP49619 791 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 ZNF326Q5BKZ1 582 aaKnown RBP4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 TMEM102Q8N9M5 508 aaPredicted RBP4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 DCAF11Q8TEB1 546 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 OSMRQ99650 979 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 SRCIN1Q9C0H9 1055 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 ZFYVE1Q9HBF4 777 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 PODXL2Q9NZ53 605 aa4.82□□□□□ -1.64
RNU6-4P-201ENST00000384205 A0A1W2PP55 124 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 PDE2AO00408 941 aaPredicted RBP4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 POLR3DP05423 398 aaPredicted RBP4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 AFF1P51825 1210 aaKnown RBP4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 USPL1Q5W0Q7 1092 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 CEP135Q66GS9 1140 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 NUDT8Q8WV74 236 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 NXPE3Q969Y0 559 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 BHLHE41Q9C0J9 482 aaPredicted RBP4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 EHD4Q9H223 541 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 RASSF4Q9H2L5 321 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 SUV39H2Q9H5I1 410 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 SRA1Q9HD15 236 aaKnown RBP4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 NPHS2Q9NP85 383 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 NOP53Q9NZM5 478 aaKnown RBP4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 SPG7Q9UQ90 795 aa4.81□□□□□ -1.64
RNU6-4P-201ENST00000384205 NFKBIEO00221 500 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 GADD45BO75293 160 aaPredicted RBP4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 XRCC5P13010 732 aaKnown RBP4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 HOXB4P17483 251 aaPredicted RBP4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 CDC27P30260 824 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 CABP4P57796 275 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 PEAR1Q5VY43 1037 aaPredicted RBP4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 MSL1Q68DK7 614 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 PRPF40BQ6NWY9 871 aaKnown RBP4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 LINC00114Q6XXX2 140 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 FBXO33Q7Z6M2 555 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 ALYREFQ86V81 257 aaKnown RBP4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 WFDC8Q8IUA0 241 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 CCNJLQ8IV13 435 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 MAP4K3Q8IVH8 894 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 DTWD1Q8N5C7 304 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 DCAF5Q96JK2 942 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 ZKSCAN3Q9BRR0 538 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 BCL2L13Q9BXK5 485 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 ADAM19Q9H013 955 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 LIN7BQ9HAP6 207 aa4.8□□□□□ -1.64
RNU6-4P-201ENST00000384205 NID1P14543 1247 aa4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 ATP11AP98196 1134 aa4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 XPCQ01831 940 aaPredicted RBP4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 PTPN12Q05209 780 aaKnown RBP4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 GRIK5Q16478 980 aa4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.79□□□□□ -1.646e-12■□□□□ 8.2
RNU6-4P-201ENST00000384205 GDF6Q6KF10 455 aaPredicted RBP4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 FAM117BQ6P1L5 589 aa4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 IL22RA1Q8N6P7 574 aa4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 EPS8L3Q8TE67 593 aaKnown RBP4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 BSNDQ8WZ55 320 aa4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 POP1Q99575 1024 aaKnown RBP4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 PPME1Q9Y570 386 aa4.79□□□□□ -1.64
RNU6-4P-201ENST00000384205 GNA15P30679 374 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 RAC1P63000 192 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 SNRPNP63162 240 aaKnown RBP4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 COL9A3Q14050 684 aaPredicted RBP4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 PRRT3Q5FWE3 981 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 WNT8BQ93098 351 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 TCF12Q99081 682 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 BCO2Q9BYV7 579 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 LATS2Q9NRM7 1088 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 WWC3Q9ULE0 1092 aa4.78□□□□□ -1.64
RNU6-4P-201ENST00000384205 TRIM33Q9UPN9 1127 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms