RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ZKSCAN3Q9BRR0 538 aa21.89■■□□□ 1.09
CSPG5-202ENST00000383738 TCEAL9Q9UHQ7 104 aa21.89■■□□□ 1.09
CSPG5-202ENST00000383738 ZNF500O60304 480 aaPredicted RBP21.89■■□□□ 1.09
CSPG5-202ENST00000383738 XAGE2Q96GT9 111 aa21.89■■□□□ 1.09
CSPG5-202ENST00000383738 ZSCAN31Q96LW9 406 aaPredicted RBP21.88■■□□□ 1.09
CSPG5-202ENST00000383738 IBSPP21815 317 aaPredicted RBP21.88■■□□□ 1.09
CSPG5-202ENST00000383738 BRMS1Q9HCU9 246 aa21.88■■□□□ 1.09
CSPG5-202ENST00000383738 TLR7Q9NYK1 1049 aaKnown RBP21.88■■□□□ 1.09
CSPG5-202ENST00000383738 LRMPQ12912 555 aa21.88■■□□□ 1.09
CSPG5-202ENST00000383738 TRMT1LQ7Z2T5 733 aaKnown RBP21.88■■□□□ 1.09
CSPG5-202ENST00000383738 CNBD1Q8NA66 436 aa21.88■■□□□ 1.09
CSPG5-202ENST00000383738 NAT10Q9H0A0 1025 aaKnown RBP21.88■■□□□ 1.09
CSPG5-202ENST00000383738 HSP90B2PQ58FF3 399 aa21.87■■□□□ 1.09
CSPG5-202ENST00000383738 TMEM67Q5HYA8 995 aa21.87■■□□□ 1.09
CSPG5-202ENST00000383738 ARHGEF40Q8TER5 1519 aa21.87■■□□□ 1.09
CSPG5-202ENST00000383738 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
CSPG5-202ENST00000383738 NOC3LQ8WTT2 800 aaKnown RBP21.87■■□□□ 1.09
CSPG5-202ENST00000383738 CRKLP46109 303 aaKnown RBP21.86■■□□□ 1.09
CSPG5-202ENST00000383738 NAA16Q6N069 864 aaPredicted RBP21.86■■□□□ 1.09
CSPG5-202ENST00000383738 TMCO3Q6UWJ1 677 aa21.86■■□□□ 1.09
CSPG5-202ENST00000383738 ZNF444Q8N0Y2 327 aaPredicted RBP21.86■■□□□ 1.09
CSPG5-202ENST00000383738 SLC12A7Q9Y666 1083 aa21.86■■□□□ 1.09
CSPG5-202ENST00000383738 TSPY2A6NKD2 308 aa21.86■■□□□ 1.09
CSPG5-202ENST00000383738 PRDM1O75626 825 aa21.86■■□□□ 1.09
CSPG5-202ENST00000383738 SKILP12757 684 aa21.86■■□□□ 1.09
CSPG5-202ENST00000383738 USPL1Q5W0Q7 1092 aa21.86■■□□□ 1.09
CSPG5-202ENST00000383738 GTPBP4Q9BZE4 634 aaKnown RBP21.86■■□□□ 1.09
CSPG5-202ENST00000383738 KLF18A0A0U1RQI7 1052 aa21.85■■□□□ 1.09
CSPG5-202ENST00000383738 PATL2C9JE40 543 aaKnown RBP21.85■■□□□ 1.09
CSPG5-202ENST00000383738 PIK3C2BO00750 1634 aa21.85■■□□□ 1.09
CSPG5-202ENST00000383738 CPS1P31327 1500 aa21.85■■□□□ 1.09
CSPG5-202ENST00000383738 SYT1P21579 422 aa21.85■■□□□ 1.09
CSPG5-202ENST00000383738 LMTK2Q8IWU2 1503 aa21.85■■□□□ 1.09
CSPG5-202ENST00000383738 RBM26Q5T8P6 1007 aaKnown RBP21.85■■□□□ 1.09
CSPG5-202ENST00000383738 Q6ZUG5 572 aa21.85■■□□□ 1.09
CSPG5-202ENST00000383738 KRT222Q8N1A0 295 aa21.85■■□□□ 1.09
CSPG5-202ENST00000383738 ZAP70P43403 619 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 GREM2Q9H772 168 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 AK2P54819 239 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 MFSD6Q6ZSS7 791 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 SSH3Q8TE77 659 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 C8orf76Q96K31 380 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 CDCA7Q9BWT1 371 aaPredicted RBP21.84■■□□□ 1.09
CSPG5-202ENST00000383738 ZC3H12CQ9C0D7 883 aaKnown RBP21.84■■□□□ 1.09
CSPG5-202ENST00000383738 PALD1Q9ULE6 856 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 PCMTD1Q96MG8 357 aaPredicted RBP21.84■■□□□ 1.09
CSPG5-202ENST00000383738 PDE8AO60658 829 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 DHX8Q14562 1220 aaKnown RBP21.84■■□□□ 1.09
CSPG5-202ENST00000383738 UVSSAQ2YD98 709 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 CREB3L3Q68CJ9 461 aa21.84■■□□□ 1.09
CSPG5-202ENST00000383738 GOLGA8AA7E2F4 631 aa21.83■■□□□ 1.09
CSPG5-202ENST00000383738 IQCA1Q86XH1 822 aa21.83■■□□□ 1.09
CSPG5-202ENST00000383738 TIGD1Q96MW7 591 aa21.83■■□□□ 1.09
CSPG5-202ENST00000383738 UQCRFS1P1P0C7P4 283 aa21.83■■□□□ 1.09
CSPG5-202ENST00000383738 SFPQP23246 707 aaKnown RBP eCLIP21.83■■□□□ 1.08
CSPG5-202ENST00000383738 APOBRQ0VD83 1088 aa21.83■■□□□ 1.08
CSPG5-202ENST00000383738 TTF1Q15361 905 aaPredicted RBP21.83■■□□□ 1.08
CSPG5-202ENST00000383738 ORC3Q9UBD5 711 aaPredicted RBP21.83■■□□□ 1.08
CSPG5-202ENST00000383738 QRICH2Q9H0J4 1663 aa21.83■■□□□ 1.08
CSPG5-202ENST00000383738 PI16Q6UXB8 463 aa21.82■■□□□ 1.08
CSPG5-202ENST00000383738 CEP57L1Q8IYX8 460 aa21.82■■□□□ 1.08
CSPG5-202ENST00000383738 SEC31BQ9NQW1 1179 aa21.82■■□□□ 1.08
CSPG5-202ENST00000383738 CFAP100Q494V2 611 aa21.82■■□□□ 1.08
CSPG5-202ENST00000383738 SRP68Q9UHB9 627 aaKnown RBP21.82■■□□□ 1.08
CSPG5-202ENST00000383738 CDK12Q9NYV4 1490 aaPredicted RBP21.82■■□□□ 1.08
CSPG5-202ENST00000383738 PYCARDQ9ULZ3 195 aa21.82■■□□□ 1.08
CSPG5-202ENST00000383738 TYRO3Q06418 890 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 FAM196AQ6ZSG2 479 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 FAM200AQ8TCP9 573 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 F13A1P00488 732 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 HLFQ16534 295 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 ERCC4Q92889 916 aaPredicted RBP21.81■■□□□ 1.08
CSPG5-202ENST00000383738 ZHX3Q9H4I2 956 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 TTC41PQ6P2S7 1318 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 MBD4O95243 580 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 SSBP05455 408 aaKnown RBP eCLIP21.81■■□□□ 1.08
CSPG5-202ENST00000383738 EPHA10Q5JZY3 1008 aa21.81■■□□□ 1.08
CSPG5-202ENST00000383738 FAM193AP78312 1265 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 LEKR1Q6ZMV7 388 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 TMC6Q7Z403 805 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 ZNF396Q96N95 335 aaPredicted RBP21.8■■□□□ 1.08
CSPG5-202ENST00000383738 RNF113AO15541 343 aaKnown RBP21.8■■□□□ 1.08
CSPG5-202ENST00000383738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.8■■□□□ 1.08
CSPG5-202ENST00000383738 FRMPD1Q5SYB0 1578 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 GYG1P46976 350 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 SLC26A6Q9BXS9 759 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 NCOA7Q8NI08 942 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 CCDC102AQ96A19 550 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 ARMT1Q9H993 441 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 TMOD2Q9NZR1 351 aa21.8■■□□□ 1.08
CSPG5-202ENST00000383738 CPSF1Q10570 1443 aaKnown RBP21.79■■□□□ 1.08
CSPG5-202ENST00000383738 ADORA1P30542 326 aa21.79■■□□□ 1.08
CSPG5-202ENST00000383738 CALCOCO1Q9P1Z2 691 aa21.79■■□□□ 1.08
CSPG5-202ENST00000383738 CCDC96Q2M329 555 aa21.79■■□□□ 1.08
CSPG5-202ENST00000383738 NAA30Q147X3 362 aaPredicted RBP21.78■■□□□ 1.08
CSPG5-202ENST00000383738 SLFNL1Q499Z3 407 aa21.78■■□□□ 1.08
CSPG5-202ENST00000383738 CTCFLQ8NI51 663 aaPredicted RBP21.78■■□□□ 1.08
CSPG5-202ENST00000383738 MCM9Q9NXL9 1143 aa21.78■■□□□ 1.08
CSPG5-202ENST00000383738 ZBTB22O15209 634 aa21.78■■□□□ 1.08
CSPG5-202ENST00000383738 UFL1O94874 794 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms