RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 CDC5LQ99459 802 aaKnown RBP29.12■■■□□ 2.25
VLDLR-201ENST00000382096 IL16Q14005 1332 aa29.12■■■□□ 2.25
VLDLR-201ENST00000382096 MAP3K2Q9Y2U5 619 aa29.11■■■□□ 2.25
VLDLR-201ENST00000382096 ZNF316A6NFI3 1004 aaPredicted RBP29.09■■■□□ 2.25
VLDLR-201ENST00000382096 TTLL11Q8NHH1 800 aa29.09■■■□□ 2.25
VLDLR-201ENST00000382096 BSDC1Q9NW68 430 aaPredicted RBP29.09■■■□□ 2.25
VLDLR-201ENST00000382096 WTIPA6NIX2 430 aaPredicted RBP29.08■■■□□ 2.25
VLDLR-201ENST00000382096 IGKV5-2P06315 115 aa29.08■■■□□ 2.25
VLDLR-201ENST00000382096 CTU1Q7Z7A3 348 aaKnown RBP29.08■■■□□ 2.25
VLDLR-201ENST00000382096 MRS2Q9HD23 443 aa29.08■■■□□ 2.25
VLDLR-201ENST00000382096 MINPP1Q9UNW1 487 aa29.08■■■□□ 2.25
VLDLR-201ENST00000382096 KSR2Q6VAB6 950 aa29.07■■■□□ 2.24
VLDLR-201ENST00000382096 ANP32CO43423 234 aa29.06■■■□□ 2.24
VLDLR-201ENST00000382096 DACT2Q5SW24 774 aa29.06■■■□□ 2.24
VLDLR-201ENST00000382096 GREM2Q9H772 168 aa29.06■■■□□ 2.24
VLDLR-201ENST00000382096 MYO3BQ8WXR4 1341 aa29.05■■■□□ 2.24
VLDLR-201ENST00000382096 PI4KAP2A4QPH2 592 aa29.05■■■□□ 2.24
VLDLR-201ENST00000382096 TWISTNBQ3B726 338 aaPredicted RBP29.05■■■□□ 2.24
VLDLR-201ENST00000382096 NBPF9Q3BBW0 867 aa29.05■■■□□ 2.24
VLDLR-201ENST00000382096 MOB2Q70IA6 237 aa29.05■■■□□ 2.24
VLDLR-201ENST00000382096 PI4KAP1Q8N8J0 262 aa29.05■■■□□ 2.24
VLDLR-201ENST00000382096 STK31Q9BXU1 1019 aa29.05■■■□□ 2.24
VLDLR-201ENST00000382096 SCAF8Q9UPN6 1271 aaKnown RBP29.05■■■□□ 2.24
VLDLR-201ENST00000382096 CACNA1FO60840 1977 aa29.04■■■□□ 2.24
VLDLR-201ENST00000382096 CCT4P50991 539 aaKnown RBP29.04■■■□□ 2.24
VLDLR-201ENST00000382096 SOX10P56693 466 aa29.03■■■□□ 2.24
VLDLR-201ENST00000382096 NEXNQ0ZGT2 675 aa29.03■■■□□ 2.24
VLDLR-201ENST00000382096 OGFOD1Q8N543 542 aa29.03■■■□□ 2.24
VLDLR-201ENST00000382096 ECM29Q5VYK3 1845 aa29.02■■■□□ 2.24
VLDLR-201ENST00000382096 UBE2Q2LH0YL09 131 aa29.02■■■□□ 2.24
VLDLR-201ENST00000382096 WNT10BO00744 389 aa29.02■■■□□ 2.24
VLDLR-201ENST00000382096 STRIP1Q5VSL9 837 aa29.02■■■□□ 2.24
VLDLR-201ENST00000382096 MXD3Q9BW11 206 aa29.02■■■□□ 2.24
VLDLR-201ENST00000382096 COA1Q9GZY4 146 aa29.02■■■□□ 2.24
VLDLR-201ENST00000382096 A0A1B0GUL6 1792 aa29.02■■■□□ 2.24
VLDLR-201ENST00000382096 NEURL1BA8MQ27 555 aa29.01■■■□□ 2.23
VLDLR-201ENST00000382096 MMP14P50281 582 aa29.01■■■□□ 2.23
VLDLR-201ENST00000382096 CWF19L2Q2TBE0 894 aaKnown RBP29.01■■■□□ 2.23
VLDLR-201ENST00000382096 PRAMEF18Q5VWM3 479 aa29.01■■■□□ 2.23
VLDLR-201ENST00000382096 WDR63Q8IWG1 891 aa29■■■□□ 2.23
VLDLR-201ENST00000382096 LEMD3Q9Y2U8 911 aa29■■■□□ 2.23
VLDLR-201ENST00000382096 LAMB1P07942 1786 aa29■■■□□ 2.23
VLDLR-201ENST00000382096 FANCIQ9NVI1 1328 aa28.99■■■□□ 2.23
VLDLR-201ENST00000382096 G2E3Q7L622 706 aa28.99■■■□□ 2.23
VLDLR-201ENST00000382096 TXNRD3Q86VQ6 643 aa28.99■■■□□ 2.23
VLDLR-201ENST00000382096 H7C1W4 665 aa28.98■■■□□ 2.23
VLDLR-201ENST00000382096 SLC4A2P04920 1241 aa28.98■■■□□ 2.23
VLDLR-201ENST00000382096 UBE3BQ7Z3V4 1068 aa28.98■■■□□ 2.23
VLDLR-201ENST00000382096 NF2P35240 595 aa28.97■■■□□ 2.23
VLDLR-201ENST00000382096 TM4SF4P48230 202 aa28.97■■■□□ 2.23
VLDLR-201ENST00000382096 PKN2Q16513 984 aaKnown RBP28.97■■■□□ 2.23
VLDLR-201ENST00000382096 FBXW7Q969H0 707 aa28.97■■■□□ 2.23
VLDLR-201ENST00000382096 IGHMBP2P38935 993 aaKnown RBP28.96■■■□□ 2.23
VLDLR-201ENST00000382096 TTLL12Q14166 644 aaPredicted RBP28.96■■■□□ 2.23
VLDLR-201ENST00000382096 NOM1Q5C9Z4 860 aaKnown RBP28.96■■■□□ 2.23
VLDLR-201ENST00000382096 ZNF296Q8WUU4 475 aaPredicted RBP28.96■■■□□ 2.23
VLDLR-201ENST00000382096 PLA2G12BQ9BX93 195 aa28.96■■■□□ 2.23
VLDLR-201ENST00000382096 HPS5Q9UPZ3 1129 aa28.96■■■□□ 2.23
VLDLR-201ENST00000382096 ZNF804BA4D1E1 1349 aa28.95■■■□□ 2.23
VLDLR-201ENST00000382096 SASH1O94885 1247 aa28.95■■■□□ 2.22
VLDLR-201ENST00000382096 TBC1D8O95759 1140 aa28.95■■■□□ 2.22
VLDLR-201ENST00000382096 FLIIQ13045 1269 aa28.94■■■□□ 2.22
VLDLR-201ENST00000382096 TTLL5Q6EMB2 1281 aa28.94■■■□□ 2.22
VLDLR-201ENST00000382096 ANKRD2Q9GZV1 360 aa28.94■■■□□ 2.22
VLDLR-201ENST00000382096 HDAC9Q9UKV0 1011 aa28.94■■■□□ 2.22
VLDLR-201ENST00000382096 COL1A1P02452 1464 aaPredicted RBP28.93■■■□□ 2.22
VLDLR-201ENST00000382096 VAMP4O75379 141 aa28.93■■■□□ 2.22
VLDLR-201ENST00000382096 ITGA6P23229 1130 aa28.93■■■□□ 2.22
VLDLR-201ENST00000382096 KLRK1P26718 216 aa28.93■■■□□ 2.22
VLDLR-201ENST00000382096 APOBEC3FQ8IUX4 373 aaKnown RBP28.93■■■□□ 2.22
VLDLR-201ENST00000382096 ZBED3Q96IU2 234 aaPredicted RBP28.93■■■□□ 2.22
VLDLR-201ENST00000382096 GCKRQ14397 625 aa28.92■■■□□ 2.22
VLDLR-201ENST00000382096 CFHR5Q9BXR6 569 aa28.92■■■□□ 2.22
VLDLR-201ENST00000382096 CASP7P55210 303 aa28.91■■■□□ 2.22
VLDLR-201ENST00000382096 SREBF2Q12772 1141 aa28.91■■■□□ 2.22
VLDLR-201ENST00000382096 ARMC9Q7Z3E5 817 aa28.91■■■□□ 2.22
VLDLR-201ENST00000382096 KIAA0825Q8IV33 1275 aa28.91■■■□□ 2.22
VLDLR-201ENST00000382096 GPR25O00155 361 aa28.9■■■□□ 2.22
VLDLR-201ENST00000382096 CSF1RP07333 972 aa28.9■■■□□ 2.22
VLDLR-201ENST00000382096 PTPN12Q05209 780 aaKnown RBP28.9■■■□□ 2.22
VLDLR-201ENST00000382096 MPHOSPH8Q99549 860 aa28.9■■■□□ 2.22
VLDLR-201ENST00000382096 HTTP42858 3142 aa28.89■■■□□ 2.22
VLDLR-201ENST00000382096 MKRN3Q13064 507 aaKnown RBP28.89■■■□□ 2.22
VLDLR-201ENST00000382096 LDLRAD1Q5T700 205 aa28.89■■■□□ 2.22
VLDLR-201ENST00000382096 PCDH10Q9P2E7 1040 aa28.89■■■□□ 2.22
VLDLR-201ENST00000382096 SALL2Q9Y467 1007 aaPredicted RBP28.89■■■□□ 2.22
VLDLR-201ENST00000382096 GTF2IP78347 998 aa28.88■■■□□ 2.21
VLDLR-201ENST00000382096 EXOSC9Q06265 439 aaKnown RBP28.88■■■□□ 2.21
VLDLR-201ENST00000382096 DNAAF4Q8WXU2 420 aa28.88■■■□□ 2.21
VLDLR-201ENST00000382096 MYH16Q9H6N6 1097 aa28.88■■■□□ 2.21
VLDLR-201ENST00000382096 CHRNDQ07001 517 aa28.87■■■□□ 2.21
VLDLR-201ENST00000382096 FKBP5Q13451 457 aaPredicted RBP28.87■■■□□ 2.21
VLDLR-201ENST00000382096 LINS1Q8NG48 757 aa28.87■■■□□ 2.21
VLDLR-201ENST00000382096 SPINK5Q9NQ38 1064 aaPredicted RBP28.87■■■□□ 2.21
VLDLR-201ENST00000382096 IRS2Q9Y4H2 1338 aa28.87■■■□□ 2.21
VLDLR-201ENST00000382096 CD209Q9NNX6 404 aa28.86■■■□□ 2.21
VLDLR-201ENST00000382096 KCNJ4P48050 445 aa28.85■■■□□ 2.21
VLDLR-201ENST00000382096 PRKG1Q13976 671 aa28.85■■■□□ 2.21
VLDLR-201ENST00000382096 PRPF38BQ5VTL8 546 aaKnown RBP28.85■■■□□ 2.21
VLDLR-201ENST00000382096 SPRYD7Q5W111 196 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms