RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 SCAF8Q9UPN6 1271 aaKnown RBP18.04■□□□□ 0.48
SHOX-202ENST00000381575 USP17L3A6NCW0 530 aa18.04■□□□□ 0.48
SHOX-202ENST00000381575 USP17L4A6NCW7 530 aa18.04■□□□□ 0.48
SHOX-202ENST00000381575 HUNKP57058 714 aa18.04■□□□□ 0.48
SHOX-202ENST00000381575 USP17L1Q7RTZ2 530 aa18.04■□□□□ 0.48
SHOX-202ENST00000381575 ZIC5Q96T25 663 aa18.04■□□□□ 0.48
SHOX-202ENST00000381575 GMLQ99445 158 aa18.04■□□□□ 0.48
SHOX-202ENST00000381575 SNAP23O00161 211 aa18.03■□□□□ 0.48
SHOX-202ENST00000381575 ZNF280AP59817 542 aaPredicted RBP18.03■□□□□ 0.48
SHOX-202ENST00000381575 BEND3Q5T5X7 828 aa18.03■□□□□ 0.48
SHOX-202ENST00000381575 AGBL3Q8NEM8 1001 aa18.03■□□□□ 0.48
SHOX-202ENST00000381575 MPHOSPH8Q99549 860 aa18.03■□□□□ 0.48
SHOX-202ENST00000381575 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
SHOX-202ENST00000381575 ZNF609O15014 1411 aa18.02■□□□□ 0.48
SHOX-202ENST00000381575 CSF1RP07333 972 aa18.02■□□□□ 0.47
SHOX-202ENST00000381575 SCARF1Q14162 830 aa18.02■□□□□ 0.47
SHOX-202ENST00000381575 ANGEL2Q5VTE6 544 aaKnown RBP18.02■□□□□ 0.47
SHOX-202ENST00000381575 PODNQ7Z5L7 613 aa18.02■□□□□ 0.47
SHOX-202ENST00000381575 BEGAINQ9BUH8 593 aa18.02■□□□□ 0.47
SHOX-202ENST00000381575 USP17L8P0C7I0 530 aa18.01■□□□□ 0.47
SHOX-202ENST00000381575 FOXO4P98177 505 aa18.01■□□□□ 0.47
SHOX-202ENST00000381575 CHRNDQ07001 517 aa18.01■□□□□ 0.47
SHOX-202ENST00000381575 EPHA10Q5JZY3 1008 aa18.01■□□□□ 0.47
SHOX-202ENST00000381575 SULF1Q8IWU6 871 aa18.01■□□□□ 0.47
SHOX-202ENST00000381575 HELBQ8NG08 1087 aaPredicted RBP18.01■□□□□ 0.47
SHOX-202ENST00000381575 GBA2Q9HCG7 927 aaPredicted RBP18.01■□□□□ 0.47
SHOX-202ENST00000381575 MYOZ2Q9NPC6 264 aa18.01■□□□□ 0.47
SHOX-202ENST00000381575 ZNF804BA4D1E1 1349 aa18.01■□□□□ 0.47
SHOX-202ENST00000381575 DACT2Q5SW24 774 aa18■□□□□ 0.47
SHOX-202ENST00000381575 SLC4A10Q6U841 1118 aa18■□□□□ 0.47
SHOX-202ENST00000381575 CDCA5Q96FF9 252 aa18■□□□□ 0.47
SHOX-202ENST00000381575 HHIPL1Q96JK4 782 aa18■□□□□ 0.47
SHOX-202ENST00000381575 ANKRD18BA2A2Z9 1011 aa17.99■□□□□ 0.47
SHOX-202ENST00000381575 TAF5LO75529 589 aa17.99■□□□□ 0.47
SHOX-202ENST00000381575 MAP2K2P36507 400 aa17.99■□□□□ 0.47
SHOX-202ENST00000381575 KCNJ4P48050 445 aa17.99■□□□□ 0.47
SHOX-202ENST00000381575 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
SHOX-202ENST00000381575 LEMD3Q9Y2U8 911 aa17.99■□□□□ 0.47
SHOX-202ENST00000381575 AKAP11Q9UKA4 1901 aa17.98■□□□□ 0.47
SHOX-202ENST00000381575 NBPF9Q3BBW0 867 aa17.98■□□□□ 0.47
SHOX-202ENST00000381575 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
SHOX-202ENST00000381575 C2orf69Q8N8R5 385 aa17.98■□□□□ 0.47
SHOX-202ENST00000381575 ANKRD2Q9GZV1 360 aa17.98■□□□□ 0.47
SHOX-202ENST00000381575 COA1Q9GZY4 146 aa17.98■□□□□ 0.47
SHOX-202ENST00000381575 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
SHOX-202ENST00000381575 GRM8O00222 908 aa17.97■□□□□ 0.47
SHOX-202ENST00000381575 IFIT5Q13325 482 aaKnown RBP17.97■□□□□ 0.47
SHOX-202ENST00000381575 PRAMEF18Q5VWM3 479 aa17.97■□□□□ 0.47
SHOX-202ENST00000381575 SASH1O94885 1247 aa17.96■□□□□ 0.47
SHOX-202ENST00000381575 GTF2IP78347 998 aa17.96■□□□□ 0.47
SHOX-202ENST00000381575 RGMBQ6NW40 437 aa17.96■□□□□ 0.47
SHOX-202ENST00000381575 FAM155AB1AL88 458 aaPredicted RBP17.95■□□□□ 0.46
SHOX-202ENST00000381575 PLIN1O60240 522 aa17.95■□□□□ 0.46
SHOX-202ENST00000381575 ZNF157P51786 506 aaPredicted RBP17.95■□□□□ 0.46
SHOX-202ENST00000381575 BRPF1P55201 1214 aaPredicted RBP17.95■□□□□ 0.46
SHOX-202ENST00000381575 STRIP1Q5VSL9 837 aa17.95■□□□□ 0.46
SHOX-202ENST00000381575 TTLL5Q6EMB2 1281 aa17.95■□□□□ 0.46
SHOX-202ENST00000381575 MOB2Q70IA6 237 aa17.95■□□□□ 0.46
SHOX-202ENST00000381575 KIAA0825Q8IV33 1275 aa17.95■□□□□ 0.46
SHOX-202ENST00000381575 C9orf78Q9NZ63 289 aaPredicted RBP17.95■□□□□ 0.46
SHOX-202ENST00000381575 PAPPA2Q9BXP8 1791 aa17.95■□□□□ 0.46
SHOX-202ENST00000381575 IRS2Q9Y4H2 1338 aa17.94■□□□□ 0.46
SHOX-202ENST00000381575 NOGQ13253 232 aa17.94■□□□□ 0.46
SHOX-202ENST00000381575 SUCLG2Q96I99 432 aa17.94■□□□□ 0.46
SHOX-202ENST00000381575 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
SHOX-202ENST00000381575 JAG2Q9Y219 1238 aa17.94■□□□□ 0.46
SHOX-202ENST00000381575 TAF7LQ5H9L4 462 aa17.93■□□□□ 0.46
SHOX-202ENST00000381575 OGFOD1Q8N543 542 aa17.93■□□□□ 0.46
SHOX-202ENST00000381575 CD209Q9NNX6 404 aa17.93■□□□□ 0.46
SHOX-202ENST00000381575 ECM29Q5VYK3 1845 aa17.93■□□□□ 0.46
SHOX-202ENST00000381575 MYO3BQ8WXR4 1341 aa17.93■□□□□ 0.46
SHOX-202ENST00000381575 PITPNM2Q9BZ72 1349 aa17.93■□□□□ 0.46
SHOX-202ENST00000381575 WNT10BO00744 389 aa17.92■□□□□ 0.46
SHOX-202ENST00000381575 ALDH1L1O75891 902 aa17.92■□□□□ 0.46
SHOX-202ENST00000381575 CCDC57Q2TAC2 916 aa17.92■□□□□ 0.46
SHOX-202ENST00000381575 CNNM1Q9NRU3 951 aa17.92■□□□□ 0.46
SHOX-202ENST00000381575 NBPF7P0C2Y1 421 aaPredicted RBP17.91■□□□□ 0.46
SHOX-202ENST00000381575 KIF23Q02241 960 aaPredicted RBP17.91■□□□□ 0.46
SHOX-202ENST00000381575 LDHAL6AQ6ZMR3 332 aa17.91■□□□□ 0.46
SHOX-202ENST00000381575 CERS5Q8N5B7 392 aa17.91■□□□□ 0.46
SHOX-202ENST00000381575 MRPL50Q8N5N7 158 aaKnown RBP17.91■□□□□ 0.46
SHOX-202ENST00000381575 ABHD8Q96I13 439 aa17.91■□□□□ 0.46
SHOX-202ENST00000381575 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
SHOX-202ENST00000381575 PCDHAC2Q9Y5I4 1007 aa17.91■□□□□ 0.46
SHOX-202ENST00000381575 F8W031 263 aaPredicted RBP17.91■□□□□ 0.46
SHOX-202ENST00000381575 SLC10A3P09131 477 aa17.91■□□□□ 0.46
SHOX-202ENST00000381575 PUS3Q9BZE2 481 aaKnown RBP17.91■□□□□ 0.46
SHOX-202ENST00000381575 UBE2Q2LH0YL09 131 aa17.9■□□□□ 0.46
SHOX-202ENST00000381575 RASAL3Q86YV0 1011 aa17.9■□□□□ 0.46
SHOX-202ENST00000381575 CCDC102AQ96A19 550 aa17.9■□□□□ 0.46
SHOX-202ENST00000381575 CA12O43570 354 aa17.89■□□□□ 0.45
SHOX-202ENST00000381575 PRKG1Q13976 671 aa17.89■□□□□ 0.45
SHOX-202ENST00000381575 TTLL12Q14166 644 aaPredicted RBP17.89■□□□□ 0.45
SHOX-202ENST00000381575 ZNF804AQ7Z570 1209 aa17.89■□□□□ 0.45
SHOX-202ENST00000381575 SSH1Q8WYL5 1049 aa17.89■□□□□ 0.45
SHOX-202ENST00000381575 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
SHOX-202ENST00000381575 BICC1Q9H694 974 aaKnown RBP17.89■□□□□ 0.45
SHOX-202ENST00000381575 HDAC9Q9UKV0 1011 aa17.89■□□□□ 0.45
SHOX-202ENST00000381575 E9PSI1 815 aa17.88■□□□□ 0.45
SHOX-202ENST00000381575 C15orf52Q6ZUT6 534 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms