RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 SNRPA1P09661 255 aaKnown RBP8.96□□□□□ -0.98
TTC39B-203ENST00000380853 LMNB1P20700 586 aa8.96□□□□□ -0.98
TTC39B-203ENST00000380853 HPS1Q92902 700 aa8.96□□□□□ -0.98
TTC39B-203ENST00000380853 SBF1O95248 1867 aa8.96□□□□□ -0.98
TTC39B-203ENST00000380853 WDR90Q96KV7 1748 aa8.95□□□□□ -0.98
TTC39B-203ENST00000380853 ZC3H4Q9UPT8 1303 aaKnown RBP8.95□□□□□ -0.98
TTC39B-203ENST00000380853 PIP4K2AP48426 406 aaPredicted RBP8.95□□□□□ -0.98
TTC39B-203ENST00000380853 MMP16P51512 607 aa8.95□□□□□ -0.98
TTC39B-203ENST00000380853 PRR5LQ6MZQ0 368 aa8.95□□□□□ -0.98
TTC39B-203ENST00000380853 CCDC24Q8N4L8 307 aa8.95□□□□□ -0.98
TTC39B-203ENST00000380853 DLG5Q8TDM6 1919 aa8.95□□□□□ -0.98
TTC39B-203ENST00000380853 CCDC88AQ3V6T2 1871 aa8.94□□□□□ -0.98
TTC39B-203ENST00000380853 HTATSF1O43719 755 aaKnown RBP8.94□□□□□ -0.98
TTC39B-203ENST00000380853 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
TTC39B-203ENST00000380853 DCTN1Q14203 1278 aa8.94□□□□□ -0.98
TTC39B-203ENST00000380853 NBPF5PQ86XG9 351 aaPredicted RBP8.94□□□□□ -0.98
TTC39B-203ENST00000380853 BRIP1Q9BX63 1249 aa8.94□□□□□ -0.98
TTC39B-203ENST00000380853 KDM3BQ7LBC6 1761 aa8.94□□□□□ -0.98
TTC39B-203ENST00000380853 ARFGEF2Q9Y6D5 1785 aa8.94□□□□□ -0.98
TTC39B-203ENST00000380853 C21orf2O43822 256 aa8.93□□□□□ -0.98
TTC39B-203ENST00000380853 GRIPAP1Q4V328 841 aa8.93□□□□□ -0.98
TTC39B-203ENST00000380853 SOGA3Q5TF21 947 aa8.93□□□□□ -0.98
TTC39B-203ENST00000380853 PNISRQ8TF01 805 aaKnown RBP8.93□□□□□ -0.98
TTC39B-203ENST00000380853 CNKSR1Q969H4 720 aa8.93□□□□□ -0.98
TTC39B-203ENST00000380853 PNNQ9H307 717 aaKnown RBP8.93□□□□□ -0.98
TTC39B-203ENST00000380853 RRAGCQ9HB90 399 aa8.93□□□□□ -0.98
TTC39B-203ENST00000380853 SENP2Q9HC62 589 aa8.93□□□□□ -0.98
TTC39B-203ENST00000380853 PRAMEF22A3QJZ6 481 aa8.92□□□□□ -0.98
TTC39B-203ENST00000380853 FAM177BA6PVY3 158 aa8.92□□□□□ -0.98
TTC39B-203ENST00000380853 GTF2E1P29083 439 aaPredicted RBP8.92□□□□□ -0.98
TTC39B-203ENST00000380853 FSTL1Q12841 308 aa8.92□□□□□ -0.98
TTC39B-203ENST00000380853 TAF7Q15545 349 aaPredicted RBP8.92□□□□□ -0.98
TTC39B-203ENST00000380853 Q3C1V9 767 aa8.92□□□□□ -0.98
TTC39B-203ENST00000380853 KIF6Q6ZMV9 814 aa8.92□□□□□ -0.98
TTC39B-203ENST00000380853 SMC1BQ8NDV3 1235 aa8.92□□□□□ -0.98
TTC39B-203ENST00000380853 TAOK3Q9H2K8 898 aa8.92□□□□□ -0.98
TTC39B-203ENST00000380853 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
TTC39B-203ENST00000380853 USP16Q9Y5T5 823 aa8.92□□□□□ -0.98
TTC39B-203ENST00000380853 FER1L6Q2WGJ9 1857 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 NFKBIEO00221 500 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 DXOO77932 396 aaKnown RBP8.91□□□□□ -0.98
TTC39B-203ENST00000380853 SKOR1P84550 965 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 ERFEQ4G0M1 354 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 SMYD5Q6GMV2 418 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 STYK1Q6J9G0 422 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 PRPF40BQ6NWY9 871 aaKnown RBP8.91□□□□□ -0.98
TTC39B-203ENST00000380853 NGEFQ8N5V2 710 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 HLA-CQ95604 372 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 MASTLQ96GX5 879 aa8.91□□□□□ -0.98
TTC39B-203ENST00000380853 DICER1Q9UPY3 1922 aaKnown RBP8.9□□□□□ -0.98
TTC39B-203ENST00000380853 GLTPD2A6NH11 291 aa8.9□□□□□ -0.98
TTC39B-203ENST00000380853 VEGFAP15692 232 aaPredicted RBP8.9□□□□□ -0.98
TTC39B-203ENST00000380853 NFE2L2Q16236 605 aa8.9□□□□□ -0.98
TTC39B-203ENST00000380853 CCDC93Q567U6 631 aa8.9□□□□□ -0.98
TTC39B-203ENST00000380853 CLEC4GQ6UXB4 293 aa8.9□□□□□ -0.98
TTC39B-203ENST00000380853 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.98
TTC39B-203ENST00000380853 REPIN1Q9BWE0 567 aaKnown RBP8.9□□□□□ -0.98
TTC39B-203ENST00000380853 MIS18AQ9NYP9 233 aa8.9□□□□□ -0.98
TTC39B-203ENST00000380853 SLX4Q8IY92 1834 aa8.89□□□□□ -0.99
TTC39B-203ENST00000380853 CD46P15529 392 aa8.89□□□□□ -0.99
TTC39B-203ENST00000380853 NPR1P16066 1061 aa8.89□□□□□ -0.99
TTC39B-203ENST00000380853 LMOD3Q0VAK6 560 aa8.89□□□□□ -0.99
TTC39B-203ENST00000380853 NBPF10Q6P3W6 841 aaKnown RBP8.89□□□□□ -0.99
TTC39B-203ENST00000380853 TPTE2Q6XPS3 522 aa8.89□□□□□ -0.99
TTC39B-203ENST00000380853 NBPF15Q8N660 670 aa8.89□□□□□ -0.99
TTC39B-203ENST00000380853 THUMPD2Q9BTF0 503 aaKnown RBP8.89□□□□□ -0.99
TTC39B-203ENST00000380853 RRP7AQ9Y3A4 280 aaKnown RBP8.89□□□□□ -0.99
TTC39B-203ENST00000380853 LTBP3Q9NS15 1303 aa8.89□□□□□ -0.99
TTC39B-203ENST00000380853 SRGNP10124 158 aa8.88□□□□□ -0.99
TTC39B-203ENST00000380853 MYL6BP14649 208 aa8.88□□□□□ -0.99
TTC39B-203ENST00000380853 PRELPP51888 382 aa8.88□□□□□ -0.99
TTC39B-203ENST00000380853 RALBP1Q15311 655 aa8.88□□□□□ -0.99
TTC39B-203ENST00000380853 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
TTC39B-203ENST00000380853 NYXQ9GZU5 481 aa8.88□□□□□ -0.99
TTC39B-203ENST00000380853 TSPYL4Q9UJ04 414 aa8.88□□□□□ -0.99
TTC39B-203ENST00000380853 NUP98P52948 1817 aa8.87□□□□□ -0.99
TTC39B-203ENST00000380853 RPGRQ92834 1020 aaKnown RBP8.87□□□□□ -0.99
TTC39B-203ENST00000380853 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
TTC39B-203ENST00000380853 MAP3K15Q6ZN16 1313 aa8.87□□□□□ -0.99
TTC39B-203ENST00000380853 GPTP24298 496 aa8.86□□□□□ -0.99
TTC39B-203ENST00000380853 EIF4A1P60842 406 aaKnown RBP8.86□□□□□ -0.99
TTC39B-203ENST00000380853 HTRA3P83110 453 aa8.86□□□□□ -0.99
TTC39B-203ENST00000380853 WDR43Q15061 677 aaKnown RBP eCLIP8.86□□□□□ -0.99
TTC39B-203ENST00000380853 GPIHBP1Q8IV16 184 aa8.86□□□□□ -0.99
TTC39B-203ENST00000380853 KLRG1Q96E93 195 aa8.86□□□□□ -0.99
TTC39B-203ENST00000380853 PLEKHF1Q96S99 279 aa8.86□□□□□ -0.99
TTC39B-203ENST00000380853 ERBB4Q15303 1308 aa8.86□□□□□ -0.99
TTC39B-203ENST00000380853 ABCC12Q96J65 1359 aa8.86□□□□□ -0.99
TTC39B-203ENST00000380853 IBTKQ9P2D0 1353 aaPredicted RBP8.86□□□□□ -0.99
TTC39B-203ENST00000380853 IQCA1LA6NCM1 817 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 ERVV-1B6SEH8 477 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 KDM4AO75164 1064 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 ALDH1A1P00352 501 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 BMP1P13497 986 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 EIF2S2P20042 333 aaKnown RBP8.85□□□□□ -0.99
TTC39B-203ENST00000380853 ALDH1B1P30837 517 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 RIPK4P57078 832 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 FKBP4Q02790 459 aaKnown RBP eCLIP8.85□□□□□ -0.99
TTC39B-203ENST00000380853 HLFQ16534 295 aa8.85□□□□□ -0.99
TTC39B-203ENST00000380853 NUTM1Q86Y26 1132 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms