RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-203ENST00000380746 DHX32Q7L7V1 743 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-203ENST00000380746 LEO1Q8WVC0 666 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-203ENST00000380746 SCAND2PQ9GZW5 306 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-203ENST00000380746 DENND2AQ9ULE3 1009 aa12.85□□□□□ -0.35
DNMT3A-203ENST00000380746 PCDH11XQ9BZA7 1347 aa12.85□□□□□ -0.35
DNMT3A-203ENST00000380746 PCDH11YQ9BZA8 1340 aa12.85□□□□□ -0.35
DNMT3A-203ENST00000380746 E7EWF7 191 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 PRC1O43663 620 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 C8orf76Q96K31 380 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 PTPN21Q16825 1174 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 CCDC186Q7Z3E2 898 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 PIGBQ92521 554 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 PHKBQ93100 1093 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 C16orf45Q96MC5 204 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 LRP2BPQ9P2M1 347 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 ANKRD18BA2A2Z9 1011 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 HAUS7Q99871 368 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 HMG20BQ9P0W2 317 aa12.84□□□□□ -0.35
DNMT3A-203ENST00000380746 hCG_1642624A0A1W2PR95 340 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 SMC2O95347 1197 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 TDO2P48775 406 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 DZIP3Q86Y13 1208 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 AIFM3Q96NN9 605 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 GOLGA6L6A8MZA4 724 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 B4E1Z4 1266 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
DNMT3A-203ENST00000380746 LRMPQ12912 555 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 NRBP1Q9UHY1 535 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 MEGF6O75095 1541 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 MAST3O60307 1309 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 GPAA1O43292 621 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 RAI14Q9P0K7 980 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 LETM1O95202 739 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 FGAP02671 866 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 FOXO4P98177 505 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 CCDC191Q8NCU4 936 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 CFAP45Q9UL16 551 aa12.82□□□□□ -0.36
DNMT3A-203ENST00000380746 SPATA31A3Q5VYP0 1347 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 TCIRG1Q13488 830 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 PDILTQ8N807 584 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 TM6SF1Q9BZW5 370 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 AKAP2Q9Y2D5 859 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 RFX5P48382 616 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 CTDSPL2Q05D32 466 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 SEC31BQ9NQW1 1179 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 PHKA1P46020 1223 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 TRIM29Q14134 588 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 NAPBQ9H115 298 aa12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 SETD1AO15047 1707 aaKnown RBP12.81□□□□□ -0.36
DNMT3A-203ENST00000380746 MAGEB6Q8N7X4 407 aa12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 ARHGAP23Q9P227 1491 aa12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 PRDM1O75626 825 aa12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 NOLC1Q14978 699 aaKnown RBP eCLIP12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 ARMT1Q9H993 441 aa12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 PRDM10Q9NQV6 1147 aa12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 IFIT3O14879 490 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 OFD1O75665 1012 aa12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 CBX8Q9HC52 389 aa12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 HEG1Q9ULI3 1381 aa12.8□□□□□ -0.36
DNMT3A-203ENST00000380746 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 H7C1W4 665 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 ZNF609O15014 1411 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 TMX1Q9H3N1 280 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 NIP7Q9Y221 180 aaKnown RBP eCLIP12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 KIF13AQ9H1H9 1805 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 REREQ9P2R6 1566 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 ZNF396Q96N95 335 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 SLC26A6Q9BXS9 759 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 CLIP2Q9UDT6 1046 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 CTNNA3Q9UI47 895 aa12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-203ENST00000380746 MCM5P33992 734 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 TMEM67Q5HYA8 995 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 FAM200AQ8TCP9 573 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 PYCARDQ9ULZ3 195 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 NCOA7Q8NI08 942 aa12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.78□□□□□ -0.36
DNMT3A-203ENST00000380746 V9GYY5 206 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms